RNA–Protein interactions for RNA: ENST00000607150.1

PKNOX1-211, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 4

Gene PKNOX1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-211ENST00000607150 AEBP2Q6ZN18 517 aaPredicted RBP26.28■■□□□ 1.8
PKNOX1-211ENST00000607150 CHIC1Q5VXU3 224 aa25.26■■□□□ 1.63
PKNOX1-211ENST00000607150 PHF23Q9BUL5 403 aaPredicted RBP22.26■■□□□ 1.15
PKNOX1-211ENST00000607150 SENP3Q9H4L4 574 aaPredicted RBP22.23■■□□□ 1.15
PKNOX1-211ENST00000607150 FOXD1Q16676 465 aa20.76■□□□□ 0.91
PKNOX1-211ENST00000607150 PLPPR3Q6T4P5 718 aa20.34■□□□□ 0.85
PKNOX1-211ENST00000607150 PPP6R1Q9UPN7 881 aa19.77■□□□□ 0.76
PKNOX1-211ENST00000607150 ADRA2BP18089 450 aa19.73■□□□□ 0.75
PKNOX1-211ENST00000607150 PIAS4Q8N2W9 510 aaPredicted RBP19.48■□□□□ 0.71
PKNOX1-211ENST00000607150 MSH5O43196 834 aa19.16■□□□□ 0.66
PKNOX1-211ENST00000607150 POTEDQ86YR6 584 aa18.11■□□□□ 0.49
PKNOX1-211ENST00000607150 MAPK8IP2Q13387 824 aaPredicted RBP18.02■□□□□ 0.48
PKNOX1-211ENST00000607150 PPP4R3CPQ6ZMV5 832 aa17.93■□□□□ 0.46
PKNOX1-211ENST00000607150 SCAF1Q9H7N4 1312 aaKnown RBP17.9■□□□□ 0.46
PKNOX1-211ENST00000607150 DMRT2Q9Y5R5 561 aa17.72■□□□□ 0.43
PKNOX1-211ENST00000607150 CNKSR2Q8WXI2 1034 aa17.45■□□□□ 0.38
PKNOX1-211ENST00000607150 NCBP3Q53F19 620 aaKnown RBP17.29■□□□□ 0.36
PKNOX1-211ENST00000607150 HOXD11P31277 338 aaPredicted RBP17.21■□□□□ 0.35
PKNOX1-211ENST00000607150 KCNA4P22459 653 aa17.2■□□□□ 0.34
PKNOX1-211ENST00000607150 RNF216Q9NWF9 866 aaPredicted RBP17.19■□□□□ 0.34
PKNOX1-211ENST00000607150 NPM3O75607 178 aaKnown RBP17.13■□□□□ 0.33
PKNOX1-211ENST00000607150 DCAF8L1A6NGE4 600 aa17.04■□□□□ 0.32
PKNOX1-211ENST00000607150 DNAJC5BQ9UF47 199 aa16.53■□□□□ 0.24
PKNOX1-211ENST00000607150 RNF39Q9H2S5 420 aa16.44■□□□□ 0.22
PKNOX1-211ENST00000607150 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.43■□□□□ 0.22
PKNOX1-211ENST00000607150 SLC4A1APQ9BWU0 796 aaKnown RBP16.28■□□□□ 0.2
PKNOX1-211ENST00000607150 SLC4A2P04920 1241 aa16.27■□□□□ 0.2
PKNOX1-211ENST00000607150 CACNB1Q02641 598 aaPredicted RBP16.26■□□□□ 0.19
PKNOX1-211ENST00000607150 C1QBPQ07021 282 aaKnown RBP16.18■□□□□ 0.18
PKNOX1-211ENST00000607150 U3KPZ7 1027 aaPredicted RBP16.16■□□□□ 0.18
PKNOX1-211ENST00000607150 ZBTB22O15209 634 aa15.86■□□□□ 0.13
PKNOX1-211ENST00000607150 FOXD4L1Q9NU39 408 aa15.85■□□□□ 0.13
PKNOX1-211ENST00000607150 SPINK5Q9NQ38 1064 aaPredicted RBP15.84■□□□□ 0.13
PKNOX1-211ENST00000607150 MYCNP04198 464 aaPredicted RBP15.78■□□□□ 0.12
PKNOX1-211ENST00000607150 CAPN15O75808 1086 aa15.75■□□□□ 0.11
PKNOX1-211ENST00000607150 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.72■□□□□ 0.11
PKNOX1-211ENST00000607150 HNRNPUL2Q1KMD3 747 aaKnown RBP15.72■□□□□ 0.11
PKNOX1-211ENST00000607150 SAMD1Q6SPF0 538 aaPredicted RBP15.68■□□□□ 0.1
PKNOX1-211ENST00000607150 TRHP20396 242 aaPredicted RBP15.62■□□□□ 0.09
PKNOX1-211ENST00000607150 APLP2Q06481 763 aa15.6■□□□□ 0.09
PKNOX1-211ENST00000607150 DSG3P32926 999 aa15.55■□□□□ 0.08
PKNOX1-211ENST00000607150 EHMT2Q96KQ7 1210 aa15.52■□□□□ 0.08
PKNOX1-211ENST00000607150 ZNF219Q9P2Y4 722 aaPredicted RBP15.5■□□□□ 0.07
PKNOX1-211ENST00000607150 ATF5Q9Y2D1 282 aaPredicted RBP15.5■□□□□ 0.07
PKNOX1-211ENST00000607150 ABCB7O75027 752 aa15.48■□□□□ 0.07
PKNOX1-211ENST00000607150 CSRNP3Q8WYN3 585 aa15.46■□□□□ 0.07
PKNOX1-211ENST00000607150 POLA2Q14181 598 aa15.28■□□□□ 0.04
PKNOX1-211ENST00000607150 ATXN8OSP0DMR3 200 aa15.26■□□□□ 0.03
PKNOX1-211ENST00000607150 ZBTB12Q9Y330 459 aaPredicted RBP14.88□□□□□ -0.03
PKNOX1-211ENST00000607150 OSCARQ8IYS5 282 aa14.8□□□□□ -0.04
PKNOX1-211ENST00000607150 MKRN4PQ13434 485 aaPredicted RBP14.78□□□□□ -0.04
PKNOX1-211ENST00000607150 FBLN2P98095 1184 aa14.74□□□□□ -0.05
PKNOX1-211ENST00000607150 RBM42Q9BTD8 480 aaKnown RBP14.74□□□□□ -0.05
PKNOX1-211ENST00000607150 AKT1S1Q96B36 256 aa14.51□□□□□ -0.09
PKNOX1-211ENST00000607150 SPDYE2BA6NHP3 402 aa14.5□□□□□ -0.09
PKNOX1-211ENST00000607150 SPDYE6P0CI01 402 aa14.5□□□□□ -0.09
PKNOX1-211ENST00000607150 SPDYE2Q495Y8 402 aa14.5□□□□□ -0.09
PKNOX1-211ENST00000607150 REM2Q8IYK8 340 aaPredicted RBP14.44□□□□□ -0.1
PKNOX1-211ENST00000607150 ZNF692Q9BU19 519 aaPredicted RBP14.44□□□□□ -0.1
PKNOX1-211ENST00000607150 SSUH2Q9Y2M2 353 aa14.38□□□□□ -0.11
PKNOX1-211ENST00000607150 CHRDL2Q6WN34 429 aa14.34□□□□□ -0.11
PKNOX1-211ENST00000607150 PITPNM1O00562 1244 aa14.3□□□□□ -0.12
PKNOX1-211ENST00000607150 POTEHQ6S545 545 aa14.26□□□□□ -0.13
PKNOX1-211ENST00000607150 PABPN1Q86U42 306 aaKnown RBP eCLIP14.26□□□□□ -0.13
PKNOX1-211ENST00000607150 SPDYE4A6NLX3 237 aa14.25□□□□□ -0.13
PKNOX1-211ENST00000607150 CLEC11AQ9Y240 323 aa14.18□□□□□ -0.14
PKNOX1-211ENST00000607150 SPDYE1Q8NFV5 336 aaPredicted RBP14.15□□□□□ -0.14
PKNOX1-211ENST00000607150 PIP4P2Q8N4L2 257 aa14.1□□□□□ -0.15
PKNOX1-211ENST00000607150 FXR2P51116 673 aaKnown RBP eCLIP14.05□□□□□ -0.16
PKNOX1-211ENST00000607150 FKBP8Q14318 412 aa13.99□□□□□ -0.17
PKNOX1-211ENST00000607150 PRR29P0C7W0 189 aa13.97□□□□□ -0.17
PKNOX1-211ENST00000607150 PRKAR2AP13861 404 aaKnown RBP13.93□□□□□ -0.18
PKNOX1-211ENST00000607150 PROM2Q8N271 834 aa13.93□□□□□ -0.18
PKNOX1-211ENST00000607150 CHADLQ6NUI6 762 aa13.91□□□□□ -0.18
PKNOX1-211ENST00000607150 STAG3Q9UJ98 1225 aa13.85□□□□□ -0.19
PKNOX1-211ENST00000607150 CREBZFQ9NS37 354 aa13.74□□□□□ -0.21
PKNOX1-211ENST00000607150 HAX1O00165 279 aa13.73□□□□□ -0.21
PKNOX1-211ENST00000607150 FARP1Q9Y4F1 1045 aaPredicted RBP13.68□□□□□ -0.22
PKNOX1-211ENST00000607150 EVX2Q03828 476 aa13.67□□□□□ -0.22
PKNOX1-211ENST00000607150 C19orf67A6NJJ6 358 aa13.59□□□□□ -0.23
PKNOX1-211ENST00000607150 MNX1P50219 401 aaPredicted RBP13.57□□□□□ -0.24
PKNOX1-211ENST00000607150 MIER1Q8N108 512 aa13.55□□□□□ -0.24
PKNOX1-211ENST00000607150 SP7Q8TDD2 431 aaPredicted RBP13.54□□□□□ -0.24
PKNOX1-211ENST00000607150 CD44P16070 742 aaKnown RBP13.5□□□□□ -0.25
PKNOX1-211ENST00000607150 PLCD3Q8N3E9 789 aa13.48□□□□□ -0.25
PKNOX1-211ENST00000607150 FBXO3Q9UK99 471 aa13.47□□□□□ -0.25
PKNOX1-211ENST00000607150 NPM1P06748 294 aaKnown RBP eCLIP13.42□□□□□ -0.26
PKNOX1-211ENST00000607150 PLEKHG5O94827 1062 aa13.41□□□□□ -0.26
PKNOX1-211ENST00000607150 ZRANB1Q9UGI0 708 aa13.38□□□□□ -0.27
PKNOX1-211ENST00000607150 VASPP50552 380 aaPredicted RBP13.37□□□□□ -0.27
PKNOX1-211ENST00000607150 GABBR2O75899 941 aa13.31□□□□□ -0.28
PKNOX1-211ENST00000607150 TSPYL2Q9H2G4 693 aaPredicted RBP13.3□□□□□ -0.28
PKNOX1-211ENST00000607150 RASEFQ8IZ41 740 aa13.29□□□□□ -0.28
PKNOX1-211ENST00000607150 PAK3O75914 559 aaPredicted RBP13.28□□□□□ -0.28
PKNOX1-211ENST00000607150 ZNF579Q8NAF0 562 aaKnown RBP13.27□□□□□ -0.29
PKNOX1-211ENST00000607150 PHF12Q96QT6 1004 aa13.27□□□□□ -0.29
PKNOX1-211ENST00000607150 ZBTB47Q9UFB7 747 aaPredicted RBP13.26□□□□□ -0.29
PKNOX1-211ENST00000607150 NUBP1P53384 320 aa13.24□□□□□ -0.29
PKNOX1-211ENST00000607150 KLHL34Q8N239 644 aa13.23□□□□□ -0.29
PKNOX1-211ENST00000607150 IFNLR1Q8IU57 520 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms