RNA–Protein interactions for RNA: ENST00000606558.5

TRAM2-AS1-203, Transcript of TRAM2 antisense RNA 1 (head to head), humanhuman

TSL 2

Gene TRAM2-AS1, Length 553 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM2-AS1-203ENST00000606558 AEBP2Q6ZN18 517 aaPredicted RBP25.68■■□□□ 1.7
TRAM2-AS1-203ENST00000606558 CHIC1Q5VXU3 224 aa25■■□□□ 1.59
TRAM2-AS1-203ENST00000606558 PHF23Q9BUL5 403 aaPredicted RBP22.08■■□□□ 1.13
TRAM2-AS1-203ENST00000606558 SENP3Q9H4L4 574 aaPredicted RBP21.63■■□□□ 1.05
TRAM2-AS1-203ENST00000606558 PLPPR3Q6T4P5 718 aa20.23■□□□□ 0.83
TRAM2-AS1-203ENST00000606558 FOXD1Q16676 465 aa20.18■□□□□ 0.82
TRAM2-AS1-203ENST00000606558 PPP6R1Q9UPN7 881 aa19.49■□□□□ 0.71
TRAM2-AS1-203ENST00000606558 ADRA2BP18089 450 aa19.42■□□□□ 0.7
TRAM2-AS1-203ENST00000606558 PIAS4Q8N2W9 510 aaPredicted RBP18.94■□□□□ 0.62
TRAM2-AS1-203ENST00000606558 MSH5O43196 834 aa18.47■□□□□ 0.55
TRAM2-AS1-203ENST00000606558 PPP4R3CPQ6ZMV5 832 aa17.88■□□□□ 0.45
TRAM2-AS1-203ENST00000606558 MAPK8IP2Q13387 824 aaPredicted RBP17.66■□□□□ 0.42
TRAM2-AS1-203ENST00000606558 SCAF1Q9H7N4 1312 aaKnown RBP17.6■□□□□ 0.41
TRAM2-AS1-203ENST00000606558 KCNA4P22459 653 aa17.52■□□□□ 0.4
TRAM2-AS1-203ENST00000606558 CNKSR2Q8WXI2 1034 aa17.34■□□□□ 0.37
TRAM2-AS1-203ENST00000606558 DMRT2Q9Y5R5 561 aa17.32■□□□□ 0.36
TRAM2-AS1-203ENST00000606558 NCBP3Q53F19 620 aaKnown RBP17.3■□□□□ 0.36
TRAM2-AS1-203ENST00000606558 NPM3O75607 178 aaKnown RBP17.18■□□□□ 0.34
TRAM2-AS1-203ENST00000606558 RNF216Q9NWF9 866 aaPredicted RBP17.01■□□□□ 0.31
TRAM2-AS1-203ENST00000606558 HOXD11P31277 338 aaPredicted RBP16.98■□□□□ 0.31
TRAM2-AS1-203ENST00000606558 POTEDQ86YR6 584 aa16.91■□□□□ 0.3
TRAM2-AS1-203ENST00000606558 DNAJC5BQ9UF47 199 aa16.68■□□□□ 0.26
TRAM2-AS1-203ENST00000606558 SLC4A1APQ9BWU0 796 aaKnown RBP16.6■□□□□ 0.25
TRAM2-AS1-203ENST00000606558 DCAF8L1A6NGE4 600 aa16.48■□□□□ 0.23
TRAM2-AS1-203ENST00000606558 SLC4A2P04920 1241 aa16.28■□□□□ 0.2
TRAM2-AS1-203ENST00000606558 ZBTB22O15209 634 aa16.18■□□□□ 0.18
TRAM2-AS1-203ENST00000606558 EHMT2Q96KQ7 1210 aa16.15■□□□□ 0.18
TRAM2-AS1-203ENST00000606558 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.1■□□□□ 0.17
TRAM2-AS1-203ENST00000606558 CSRNP3Q8WYN3 585 aa16.06■□□□□ 0.16
TRAM2-AS1-203ENST00000606558 FOXD4L1Q9NU39 408 aa16.04■□□□□ 0.16
TRAM2-AS1-203ENST00000606558 U3KPZ7 1027 aaPredicted RBP15.93■□□□□ 0.14
TRAM2-AS1-203ENST00000606558 RNF39Q9H2S5 420 aa15.92■□□□□ 0.14
TRAM2-AS1-203ENST00000606558 MYCNP04198 464 aaPredicted RBP15.8■□□□□ 0.12
TRAM2-AS1-203ENST00000606558 C1QBPQ07021 282 aaKnown RBP15.67■□□□□ 0.1
TRAM2-AS1-203ENST00000606558 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.57■□□□□ 0.08
TRAM2-AS1-203ENST00000606558 HNRNPUL2Q1KMD3 747 aaKnown RBP15.57■□□□□ 0.08
TRAM2-AS1-203ENST00000606558 SAMD1Q6SPF0 538 aaPredicted RBP15.56■□□□□ 0.08
TRAM2-AS1-203ENST00000606558 ATF5Q9Y2D1 282 aaPredicted RBP15.52■□□□□ 0.08
TRAM2-AS1-203ENST00000606558 SPINK5Q9NQ38 1064 aaPredicted RBP15.5■□□□□ 0.07
TRAM2-AS1-203ENST00000606558 ATXN8OSP0DMR3 200 aa15.47■□□□□ 0.07
TRAM2-AS1-203ENST00000606558 CACNB1Q02641 598 aaPredicted RBP15.43■□□□□ 0.06
TRAM2-AS1-203ENST00000606558 APLP2Q06481 763 aa15.36■□□□□ 0.05
TRAM2-AS1-203ENST00000606558 CAPN15O75808 1086 aa15.33■□□□□ 0.04
TRAM2-AS1-203ENST00000606558 TRHP20396 242 aaPredicted RBP15.28■□□□□ 0.04
TRAM2-AS1-203ENST00000606558 ZNF219Q9P2Y4 722 aaPredicted RBP15.23■□□□□ 0.03
TRAM2-AS1-203ENST00000606558 DSG3P32926 999 aa15.17■□□□□ 0.02
TRAM2-AS1-203ENST00000606558 ABCB7O75027 752 aa15.09■□□□□ 0.01
TRAM2-AS1-203ENST00000606558 POLA2Q14181 598 aa15.07■□□□□ 0
TRAM2-AS1-203ENST00000606558 MKRN4PQ13434 485 aaPredicted RBP14.83□□□□□ -0.04
TRAM2-AS1-203ENST00000606558 ZBTB12Q9Y330 459 aaPredicted RBP14.7□□□□□ -0.06
TRAM2-AS1-203ENST00000606558 FBLN2P98095 1184 aa14.67□□□□□ -0.06
TRAM2-AS1-203ENST00000606558 OSCARQ8IYS5 282 aa14.55□□□□□ -0.08
TRAM2-AS1-203ENST00000606558 FKBP8Q14318 412 aa14.43□□□□□ -0.1
TRAM2-AS1-203ENST00000606558 SPDYE4A6NLX3 237 aa14.4□□□□□ -0.1
TRAM2-AS1-203ENST00000606558 SPDYE2BA6NHP3 402 aa14.38□□□□□ -0.11
TRAM2-AS1-203ENST00000606558 SPDYE6P0CI01 402 aa14.38□□□□□ -0.11
TRAM2-AS1-203ENST00000606558 SPDYE2Q495Y8 402 aa14.38□□□□□ -0.11
TRAM2-AS1-203ENST00000606558 ZNF692Q9BU19 519 aaPredicted RBP14.33□□□□□ -0.12
TRAM2-AS1-203ENST00000606558 SSUH2Q9Y2M2 353 aa14.33□□□□□ -0.12
TRAM2-AS1-203ENST00000606558 RBM42Q9BTD8 480 aaKnown RBP14.31□□□□□ -0.12
TRAM2-AS1-203ENST00000606558 PROM2Q8N271 834 aa14.24□□□□□ -0.13
TRAM2-AS1-203ENST00000606558 AKT1S1Q96B36 256 aa14.21□□□□□ -0.13
TRAM2-AS1-203ENST00000606558 PABPN1Q86U42 306 aaKnown RBP eCLIP14.17□□□□□ -0.14
TRAM2-AS1-203ENST00000606558 REM2Q8IYK8 340 aaPredicted RBP14.12□□□□□ -0.15
TRAM2-AS1-203ENST00000606558 PITPNM1O00562 1244 aa13.95□□□□□ -0.18
TRAM2-AS1-203ENST00000606558 SPDYE1Q8NFV5 336 aaPredicted RBP13.93□□□□□ -0.18
TRAM2-AS1-203ENST00000606558 CLEC11AQ9Y240 323 aa13.88□□□□□ -0.19
TRAM2-AS1-203ENST00000606558 STAG3Q9UJ98 1225 aa13.85□□□□□ -0.19
TRAM2-AS1-203ENST00000606558 FBXO3Q9UK99 471 aa13.83□□□□□ -0.2
TRAM2-AS1-203ENST00000606558 CHRDL2Q6WN34 429 aa13.79□□□□□ -0.2
TRAM2-AS1-203ENST00000606558 PRR29P0C7W0 189 aa13.75□□□□□ -0.21
TRAM2-AS1-203ENST00000606558 VASPP50552 380 aaPredicted RBP13.72□□□□□ -0.21
TRAM2-AS1-203ENST00000606558 FXR2P51116 673 aaKnown RBP eCLIP13.7□□□□□ -0.22
TRAM2-AS1-203ENST00000606558 CREBZFQ9NS37 354 aa13.68□□□□□ -0.22
TRAM2-AS1-203ENST00000606558 PIP4P2Q8N4L2 257 aa13.67□□□□□ -0.22
TRAM2-AS1-203ENST00000606558 MIER1Q8N108 512 aa13.62□□□□□ -0.23
TRAM2-AS1-203ENST00000606558 CHADLQ6NUI6 762 aa13.61□□□□□ -0.23
TRAM2-AS1-203ENST00000606558 IFNLR1Q8IU57 520 aaPredicted RBP13.6□□□□□ -0.23
TRAM2-AS1-203ENST00000606558 PRKAR2AP13861 404 aaKnown RBP13.57□□□□□ -0.24
TRAM2-AS1-203ENST00000606558 MNX1P50219 401 aaPredicted RBP13.57□□□□□ -0.24
TRAM2-AS1-203ENST00000606558 PLCD3Q8N3E9 789 aa13.57□□□□□ -0.24
TRAM2-AS1-203ENST00000606558 FARP1Q9Y4F1 1045 aaPredicted RBP13.46□□□□□ -0.25
TRAM2-AS1-203ENST00000606558 PLEKHG5O94827 1062 aa13.43□□□□□ -0.26
TRAM2-AS1-203ENST00000606558 KLHL34Q8N239 644 aa13.42□□□□□ -0.26
TRAM2-AS1-203ENST00000606558 NUBP1P53384 320 aa13.37□□□□□ -0.27
TRAM2-AS1-203ENST00000606558 POTEHQ6S545 545 aa13.36□□□□□ -0.27
TRAM2-AS1-203ENST00000606558 ZBTB47Q9UFB7 747 aaPredicted RBP13.36□□□□□ -0.27
TRAM2-AS1-203ENST00000606558 SPOCK2Q92563 424 aa13.35□□□□□ -0.27
TRAM2-AS1-203ENST00000606558 NPM1P06748 294 aaKnown RBP eCLIP13.32□□□□□ -0.28
TRAM2-AS1-203ENST00000606558 RASEFQ8IZ41 740 aa13.3□□□□□ -0.28
TRAM2-AS1-203ENST00000606558 C19orf67A6NJJ6 358 aa13.23□□□□□ -0.29
TRAM2-AS1-203ENST00000606558 EVX2Q03828 476 aa13.2□□□□□ -0.3
TRAM2-AS1-203ENST00000606558 CD44P16070 742 aaKnown RBP13.17□□□□□ -0.3
TRAM2-AS1-203ENST00000606558 TSPYL2Q9H2G4 693 aaPredicted RBP13.17□□□□□ -0.3
TRAM2-AS1-203ENST00000606558 RTN4Q9NQC3 1192 aaKnown RBP13.17□□□□□ -0.3
TRAM2-AS1-203ENST00000606558 PKD2Q13563 968 aa13.16□□□□□ -0.3
TRAM2-AS1-203ENST00000606558 HAX1O00165 279 aa13.15□□□□□ -0.3
TRAM2-AS1-203ENST00000606558 DCAF8Q5TAQ9 597 aa13.15□□□□□ -0.3
TRAM2-AS1-203ENST00000606558 FAM212AQ96EL1 285 aa13.13□□□□□ -0.31
TRAM2-AS1-203ENST00000606558 CIZ1Q9ULV3 898 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms