RNA–Protein interactions for RNA: ENST00000605031.5

FOCAD-215, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-215ENST00000605031 AEBP2Q6ZN18 517 aaPredicted RBP26.79■■□□□ 1.88
FOCAD-215ENST00000605031 CHIC1Q5VXU3 224 aa25.69■■□□□ 1.7
FOCAD-215ENST00000605031 SENP3Q9H4L4 574 aaPredicted RBP23■■□□□ 1.27
FOCAD-215ENST00000605031 PHF23Q9BUL5 403 aaPredicted RBP22.61■■□□□ 1.21
FOCAD-215ENST00000605031 FOXD1Q16676 465 aa21.3■■□□□ 1
FOCAD-215ENST00000605031 PLPPR3Q6T4P5 718 aa20.63■□□□□ 0.89
FOCAD-215ENST00000605031 MSH5O43196 834 aa20.04■□□□□ 0.8
FOCAD-215ENST00000605031 PIAS4Q8N2W9 510 aaPredicted RBP19.96■□□□□ 0.79
FOCAD-215ENST00000605031 PPP6R1Q9UPN7 881 aa19.94■□□□□ 0.78
FOCAD-215ENST00000605031 ADRA2BP18089 450 aa19.88■□□□□ 0.77
FOCAD-215ENST00000605031 POTEDQ86YR6 584 aa19.19■□□□□ 0.66
FOCAD-215ENST00000605031 SCAF1Q9H7N4 1312 aaKnown RBP18.41■□□□□ 0.54
FOCAD-215ENST00000605031 DMRT2Q9Y5R5 561 aa18.23■□□□□ 0.51
FOCAD-215ENST00000605031 MAPK8IP2Q13387 824 aaPredicted RBP18.17■□□□□ 0.5
FOCAD-215ENST00000605031 PPP4R3CPQ6ZMV5 832 aa18.02■□□□□ 0.48
FOCAD-215ENST00000605031 CNKSR2Q8WXI2 1034 aa17.73■□□□□ 0.43
FOCAD-215ENST00000605031 HOXD11P31277 338 aaPredicted RBP17.64■□□□□ 0.41
FOCAD-215ENST00000605031 RNF216Q9NWF9 866 aaPredicted RBP17.55■□□□□ 0.4
FOCAD-215ENST00000605031 NCBP3Q53F19 620 aaKnown RBP17.48■□□□□ 0.39
FOCAD-215ENST00000605031 DCAF8L1A6NGE4 600 aa17.32■□□□□ 0.36
FOCAD-215ENST00000605031 DNAJC5BQ9UF47 199 aa17.18■□□□□ 0.34
FOCAD-215ENST00000605031 NPM3O75607 178 aaKnown RBP17.1■□□□□ 0.33
FOCAD-215ENST00000605031 RNF39Q9H2S5 420 aa17.04■□□□□ 0.32
FOCAD-215ENST00000605031 CACNB1Q02641 598 aaPredicted RBP16.99■□□□□ 0.31
FOCAD-215ENST00000605031 C1QBPQ07021 282 aaKnown RBP16.87■□□□□ 0.29
FOCAD-215ENST00000605031 KCNA4P22459 653 aa16.83■□□□□ 0.28
FOCAD-215ENST00000605031 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.72■□□□□ 0.27
FOCAD-215ENST00000605031 U3KPZ7 1027 aaPredicted RBP16.38■□□□□ 0.21
FOCAD-215ENST00000605031 SLC4A2P04920 1241 aa16.28■□□□□ 0.2
FOCAD-215ENST00000605031 APLP2Q06481 763 aa16.15■□□□□ 0.18
FOCAD-215ENST00000605031 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.13■□□□□ 0.17
FOCAD-215ENST00000605031 HNRNPUL2Q1KMD3 747 aaKnown RBP16.13■□□□□ 0.17
FOCAD-215ENST00000605031 CAPN15O75808 1086 aa16.05■□□□□ 0.16
FOCAD-215ENST00000605031 SPINK5Q9NQ38 1064 aaPredicted RBP16.03■□□□□ 0.16
FOCAD-215ENST00000605031 SAMD1Q6SPF0 538 aaPredicted RBP16■□□□□ 0.15
FOCAD-215ENST00000605031 DSG3P32926 999 aa15.97■□□□□ 0.15
FOCAD-215ENST00000605031 SLC4A1APQ9BWU0 796 aaKnown RBP15.97■□□□□ 0.15
FOCAD-215ENST00000605031 ZNF219Q9P2Y4 722 aaPredicted RBP15.94■□□□□ 0.14
FOCAD-215ENST00000605031 MYCNP04198 464 aaPredicted RBP15.91■□□□□ 0.14
FOCAD-215ENST00000605031 TRHP20396 242 aaPredicted RBP15.79■□□□□ 0.12
FOCAD-215ENST00000605031 FOXD4L1Q9NU39 408 aa15.78■□□□□ 0.12
FOCAD-215ENST00000605031 ABCB7O75027 752 aa15.62■□□□□ 0.09
FOCAD-215ENST00000605031 ZBTB22O15209 634 aa15.43■□□□□ 0.06
FOCAD-215ENST00000605031 POLA2Q14181 598 aa15.42■□□□□ 0.06
FOCAD-215ENST00000605031 ATXN8OSP0DMR3 200 aa15.39■□□□□ 0.05
FOCAD-215ENST00000605031 RBM42Q9BTD8 480 aaKnown RBP15.37■□□□□ 0.05
FOCAD-215ENST00000605031 ATF5Q9Y2D1 282 aaPredicted RBP15.34■□□□□ 0.05
FOCAD-215ENST00000605031 ZBTB12Q9Y330 459 aaPredicted RBP15.32■□□□□ 0.04
FOCAD-215ENST00000605031 POTEHQ6S545 545 aa15.09■□□□□ 0.01
FOCAD-215ENST00000605031 AKT1S1Q96B36 256 aa15□□□□□ -0.01
FOCAD-215ENST00000605031 FBLN2P98095 1184 aa14.92□□□□□ -0.02
FOCAD-215ENST00000605031 OSCARQ8IYS5 282 aa14.91□□□□□ -0.02
FOCAD-215ENST00000605031 CSRNP3Q8WYN3 585 aa14.89□□□□□ -0.03
FOCAD-215ENST00000605031 CHRDL2Q6WN34 429 aa14.85□□□□□ -0.03
FOCAD-215ENST00000605031 SPDYE2BA6NHP3 402 aa14.8□□□□□ -0.04
FOCAD-215ENST00000605031 SPDYE6P0CI01 402 aa14.8□□□□□ -0.04
FOCAD-215ENST00000605031 SPDYE2Q495Y8 402 aa14.8□□□□□ -0.04
FOCAD-215ENST00000605031 REM2Q8IYK8 340 aaPredicted RBP14.76□□□□□ -0.05
FOCAD-215ENST00000605031 MKRN4PQ13434 485 aaPredicted RBP14.7□□□□□ -0.06
FOCAD-215ENST00000605031 EHMT2Q96KQ7 1210 aa14.66□□□□□ -0.06
FOCAD-215ENST00000605031 PITPNM1O00562 1244 aa14.59□□□□□ -0.07
FOCAD-215ENST00000605031 SSUH2Q9Y2M2 353 aa14.59□□□□□ -0.07
FOCAD-215ENST00000605031 ZNF692Q9BU19 519 aaPredicted RBP14.54□□□□□ -0.08
FOCAD-215ENST00000605031 FXR2P51116 673 aaKnown RBP eCLIP14.5□□□□□ -0.09
FOCAD-215ENST00000605031 PIP4P2Q8N4L2 257 aa14.5□□□□□ -0.09
FOCAD-215ENST00000605031 SPDYE1Q8NFV5 336 aaPredicted RBP14.49□□□□□ -0.09
FOCAD-215ENST00000605031 CLEC11AQ9Y240 323 aa14.32□□□□□ -0.12
FOCAD-215ENST00000605031 PABPN1Q86U42 306 aaKnown RBP eCLIP14.31□□□□□ -0.12
FOCAD-215ENST00000605031 SP7Q8TDD2 431 aaPredicted RBP14.23□□□□□ -0.13
FOCAD-215ENST00000605031 PRKAR2AP13861 404 aaKnown RBP14.21□□□□□ -0.13
FOCAD-215ENST00000605031 HAX1O00165 279 aa14.18□□□□□ -0.14
FOCAD-215ENST00000605031 PRR29P0C7W0 189 aa14.18□□□□□ -0.14
FOCAD-215ENST00000605031 SPDYE4A6NLX3 237 aa14.12□□□□□ -0.15
FOCAD-215ENST00000605031 STAG3Q9UJ98 1225 aa14.1□□□□□ -0.15
FOCAD-215ENST00000605031 C19orf67A6NJJ6 358 aa14.02□□□□□ -0.17
FOCAD-215ENST00000605031 CHADLQ6NUI6 762 aa13.99□□□□□ -0.17
FOCAD-215ENST00000605031 EVX2Q03828 476 aa13.93□□□□□ -0.18
FOCAD-215ENST00000605031 FARP1Q9Y4F1 1045 aaPredicted RBP13.91□□□□□ -0.18
FOCAD-215ENST00000605031 PROM2Q8N271 834 aa13.89□□□□□ -0.19
FOCAD-215ENST00000605031 CREBZFQ9NS37 354 aa13.83□□□□□ -0.2
FOCAD-215ENST00000605031 CLCN6P51797 869 aa13.82□□□□□ -0.2
FOCAD-215ENST00000605031 CD44P16070 742 aaKnown RBP13.78□□□□□ -0.2
FOCAD-215ENST00000605031 GABBR2O75899 941 aa13.73□□□□□ -0.21
FOCAD-215ENST00000605031 NPM1P06748 294 aaKnown RBP eCLIP13.68□□□□□ -0.22
FOCAD-215ENST00000605031 ZNF579Q8NAF0 562 aaKnown RBP13.65□□□□□ -0.22
FOCAD-215ENST00000605031 MNX1P50219 401 aaPredicted RBP13.63□□□□□ -0.23
FOCAD-215ENST00000605031 PAK3O75914 559 aaPredicted RBP13.61□□□□□ -0.23
FOCAD-215ENST00000605031 ZRANB1Q9UGI0 708 aa13.59□□□□□ -0.23
FOCAD-215ENST00000605031 PLEKHG5O94827 1062 aa13.54□□□□□ -0.24
FOCAD-215ENST00000605031 FKBP8Q14318 412 aa13.49□□□□□ -0.25
FOCAD-215ENST00000605031 MIER1Q8N108 512 aa13.42□□□□□ -0.26
FOCAD-215ENST00000605031 DCBLD2Q96PD2 775 aa13.42□□□□□ -0.26
FOCAD-215ENST00000605031 ZBTB47Q9UFB7 747 aaPredicted RBP13.41□□□□□ -0.26
FOCAD-215ENST00000605031 POTEIP0CG38 1075 aa13.4□□□□□ -0.26
FOCAD-215ENST00000605031 GALR2O43603 387 aaPredicted RBP13.36□□□□□ -0.27
FOCAD-215ENST00000605031 PHF12Q96QT6 1004 aa13.36□□□□□ -0.27
FOCAD-215ENST00000605031 PLCD3Q8N3E9 789 aa13.35□□□□□ -0.27
FOCAD-215ENST00000605031 FBXO3Q9UK99 471 aa13.34□□□□□ -0.27
FOCAD-215ENST00000605031 LHX8Q68G74 356 aa13.32□□□□□ -0.28
FOCAD-215ENST00000605031 CCDC61Q9Y6R9 512 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms