RNA–Protein interactions for RNA: ENST00000602603.1

SH3GLB1-204, Transcript of SH3 domain containing GRB2 like, endophilin B1, humanhuman

TSL 5

Gene SH3GLB1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GLB1-204ENST00000602603 AEBP2Q6ZN18 517 aaPredicted RBP27.15■■□□□ 1.94
SH3GLB1-204ENST00000602603 CHIC1Q5VXU3 224 aa25.85■■□□□ 1.73
SH3GLB1-204ENST00000602603 SENP3Q9H4L4 574 aaPredicted RBP23.3■■□□□ 1.32
SH3GLB1-204ENST00000602603 PHF23Q9BUL5 403 aaPredicted RBP22.94■■□□□ 1.26
SH3GLB1-204ENST00000602603 FOXD1Q16676 465 aa21.63■■□□□ 1.05
SH3GLB1-204ENST00000602603 PLPPR3Q6T4P5 718 aa20.71■□□□□ 0.91
SH3GLB1-204ENST00000602603 MSH5O43196 834 aa20.35■□□□□ 0.85
SH3GLB1-204ENST00000602603 PIAS4Q8N2W9 510 aaPredicted RBP20.27■□□□□ 0.84
SH3GLB1-204ENST00000602603 PPP6R1Q9UPN7 881 aa20.17■□□□□ 0.82
SH3GLB1-204ENST00000602603 ADRA2BP18089 450 aa20.14■□□□□ 0.81
SH3GLB1-204ENST00000602603 POTEDQ86YR6 584 aa19.78■□□□□ 0.76
SH3GLB1-204ENST00000602603 SCAF1Q9H7N4 1312 aaKnown RBP18.59■□□□□ 0.57
SH3GLB1-204ENST00000602603 MAPK8IP2Q13387 824 aaPredicted RBP18.47■□□□□ 0.55
SH3GLB1-204ENST00000602603 DMRT2Q9Y5R5 561 aa18.43■□□□□ 0.54
SH3GLB1-204ENST00000602603 PPP4R3CPQ6ZMV5 832 aa18.11■□□□□ 0.49
SH3GLB1-204ENST00000602603 CNKSR2Q8WXI2 1034 aa17.81■□□□□ 0.44
SH3GLB1-204ENST00000602603 HOXD11P31277 338 aaPredicted RBP17.75■□□□□ 0.43
SH3GLB1-204ENST00000602603 DCAF8L1A6NGE4 600 aa17.72■□□□□ 0.43
SH3GLB1-204ENST00000602603 RNF216Q9NWF9 866 aaPredicted RBP17.65■□□□□ 0.42
SH3GLB1-204ENST00000602603 NCBP3Q53F19 620 aaKnown RBP17.51■□□□□ 0.39
SH3GLB1-204ENST00000602603 CACNB1Q02641 598 aaPredicted RBP17.45■□□□□ 0.38
SH3GLB1-204ENST00000602603 RNF39Q9H2S5 420 aa17.3■□□□□ 0.36
SH3GLB1-204ENST00000602603 DNAJC5BQ9UF47 199 aa17.2■□□□□ 0.34
SH3GLB1-204ENST00000602603 NPM3O75607 178 aaKnown RBP17.13■□□□□ 0.33
SH3GLB1-204ENST00000602603 C1QBPQ07021 282 aaKnown RBP17.1■□□□□ 0.33
SH3GLB1-204ENST00000602603 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.97■□□□□ 0.316e-6■□□□□ 8.2
SH3GLB1-204ENST00000602603 KCNA4P22459 653 aa16.78■□□□□ 0.28
SH3GLB1-204ENST00000602603 U3KPZ7 1027 aaPredicted RBP16.53■□□□□ 0.24
SH3GLB1-204ENST00000602603 CAPN15O75808 1086 aa16.34■□□□□ 0.21
SH3GLB1-204ENST00000602603 SLC4A2P04920 1241 aa16.33■□□□□ 0.2
SH3GLB1-204ENST00000602603 SPINK5Q9NQ38 1064 aaPredicted RBP16.28■□□□□ 0.2
SH3GLB1-204ENST00000602603 APLP2Q06481 763 aa16.25■□□□□ 0.19
SH3GLB1-204ENST00000602603 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.21■□□□□ 0.19
SH3GLB1-204ENST00000602603 HNRNPUL2Q1KMD3 747 aaKnown RBP16.21■□□□□ 0.19
SH3GLB1-204ENST00000602603 DSG3P32926 999 aa16.19■□□□□ 0.18
SH3GLB1-204ENST00000602603 SAMD1Q6SPF0 538 aaPredicted RBP16.08■□□□□ 0.16
SH3GLB1-204ENST00000602603 ZNF219Q9P2Y4 722 aaPredicted RBP16.08■□□□□ 0.16
SH3GLB1-204ENST00000602603 TRHP20396 242 aaPredicted RBP16.06■□□□□ 0.16
SH3GLB1-204ENST00000602603 MYCNP04198 464 aaPredicted RBP15.92■□□□□ 0.14
SH3GLB1-204ENST00000602603 ABCB7O75027 752 aa15.9■□□□□ 0.14
SH3GLB1-204ENST00000602603 SLC4A1APQ9BWU0 796 aaKnown RBP15.9■□□□□ 0.14
SH3GLB1-204ENST00000602603 FOXD4L1Q9NU39 408 aa15.73■□□□□ 0.11
SH3GLB1-204ENST00000602603 POLA2Q14181 598 aa15.61■□□□□ 0.09
SH3GLB1-204ENST00000602603 RBM42Q9BTD8 480 aaKnown RBP15.56■□□□□ 0.08
SH3GLB1-204ENST00000602603 POTEHQ6S545 545 aa15.54■□□□□ 0.08
SH3GLB1-204ENST00000602603 ATF5Q9Y2D1 282 aaPredicted RBP15.42■□□□□ 0.06
SH3GLB1-204ENST00000602603 ZBTB12Q9Y330 459 aaPredicted RBP15.39■□□□□ 0.05
SH3GLB1-204ENST00000602603 ZBTB22O15209 634 aa15.37■□□□□ 0.05
SH3GLB1-204ENST00000602603 ATXN8OSP0DMR3 200 aa15.28■□□□□ 0.04
SH3GLB1-204ENST00000602603 CHRDL2Q6WN34 429 aa15.15■□□□□ 0.02
SH3GLB1-204ENST00000602603 AKT1S1Q96B36 256 aa15.15■□□□□ 0.02
SH3GLB1-204ENST00000602603 OSCARQ8IYS5 282 aa15.09■□□□□ 0.01
SH3GLB1-204ENST00000602603 FBLN2P98095 1184 aa14.99□□□□□ -0.01
SH3GLB1-204ENST00000602603 REM2Q8IYK8 340 aaPredicted RBP14.97□□□□□ -0.01
SH3GLB1-204ENST00000602603 SPDYE2BA6NHP3 402 aa14.87□□□□□ -0.03
SH3GLB1-204ENST00000602603 SPDYE6P0CI01 402 aa14.87□□□□□ -0.03
SH3GLB1-204ENST00000602603 SPDYE2Q495Y8 402 aa14.87□□□□□ -0.03
SH3GLB1-204ENST00000602603 PITPNM1O00562 1244 aa14.79□□□□□ -0.04
SH3GLB1-204ENST00000602603 PIP4P2Q8N4L2 257 aa14.75□□□□□ -0.05
SH3GLB1-204ENST00000602603 MKRN4PQ13434 485 aaPredicted RBP14.73□□□□□ -0.05
SH3GLB1-204ENST00000602603 CSRNP3Q8WYN3 585 aa14.7□□□□□ -0.06
SH3GLB1-204ENST00000602603 ZNF692Q9BU19 519 aaPredicted RBP14.68□□□□□ -0.06
SH3GLB1-204ENST00000602603 FXR2P51116 673 aaKnown RBP eCLIP14.67□□□□□ -0.06
SH3GLB1-204ENST00000602603 SPDYE1Q8NFV5 336 aaPredicted RBP14.62□□□□□ -0.07
SH3GLB1-204ENST00000602603 SSUH2Q9Y2M2 353 aa14.61□□□□□ -0.07
SH3GLB1-204ENST00000602603 EHMT2Q96KQ7 1210 aa14.58□□□□□ -0.08
SH3GLB1-204ENST00000602603 SP7Q8TDD2 431 aaPredicted RBP14.57□□□□□ -0.08
SH3GLB1-204ENST00000602603 CLEC11AQ9Y240 323 aa14.57□□□□□ -0.08
SH3GLB1-204ENST00000602603 HAX1O00165 279 aa14.55□□□□□ -0.08
SH3GLB1-204ENST00000602603 PRKAR2AP13861 404 aaKnown RBP14.44□□□□□ -0.1
SH3GLB1-204ENST00000602603 PABPN1Q86U42 306 aaKnown RBP eCLIP14.44□□□□□ -0.1
SH3GLB1-204ENST00000602603 PRR29P0C7W0 189 aa14.35□□□□□ -0.11
SH3GLB1-204ENST00000602603 EVX2Q03828 476 aa14.24□□□□□ -0.13
SH3GLB1-204ENST00000602603 CHADLQ6NUI6 762 aa14.23□□□□□ -0.13
SH3GLB1-204ENST00000602603 C19orf67A6NJJ6 358 aa14.21□□□□□ -0.13
SH3GLB1-204ENST00000602603 SPDYE4A6NLX3 237 aa14.12□□□□□ -0.15
SH3GLB1-204ENST00000602603 STAG3Q9UJ98 1225 aa14.12□□□□□ -0.15
SH3GLB1-204ENST00000602603 FARP1Q9Y4F1 1045 aaPredicted RBP14.06□□□□□ -0.16
SH3GLB1-204ENST00000602603 GABBR2O75899 941 aa14□□□□□ -0.17
SH3GLB1-204ENST00000602603 CD44P16070 742 aaKnown RBP14□□□□□ -0.17
SH3GLB1-204ENST00000602603 CLCN6P51797 869 aa13.91□□□□□ -0.18
SH3GLB1-204ENST00000602603 CREBZFQ9NS37 354 aa13.91□□□□□ -0.18
SH3GLB1-204ENST00000602603 ZRANB1Q9UGI0 708 aa13.79□□□□□ -0.2
SH3GLB1-204ENST00000602603 PAK3O75914 559 aaPredicted RBP13.77□□□□□ -0.21
SH3GLB1-204ENST00000602603 NPM1P06748 294 aaKnown RBP eCLIP13.77□□□□□ -0.21
SH3GLB1-204ENST00000602603 ZNF579Q8NAF0 562 aaKnown RBP13.77□□□□□ -0.21
SH3GLB1-204ENST00000602603 PROM2Q8N271 834 aa13.72□□□□□ -0.21
SH3GLB1-204ENST00000602603 DCBLD2Q96PD2 775 aa13.7□□□□□ -0.22
SH3GLB1-204ENST00000602603 LHX8Q68G74 356 aa13.67□□□□□ -0.22
SH3GLB1-204ENST00000602603 MNX1P50219 401 aaPredicted RBP13.64□□□□□ -0.23
SH3GLB1-204ENST00000602603 POTEIP0CG38 1075 aa13.63□□□□□ -0.23
SH3GLB1-204ENST00000602603 PLEKHG5O94827 1062 aa13.59□□□□□ -0.23
SH3GLB1-204ENST00000602603 GALR2O43603 387 aaPredicted RBP13.56□□□□□ -0.24
SH3GLB1-204ENST00000602603 PHF12Q96QT6 1004 aa13.56□□□□□ -0.24
SH3GLB1-204ENST00000602603 MIER1Q8N108 512 aa13.5□□□□□ -0.25
SH3GLB1-204ENST00000602603 TSPYL2Q9H2G4 693 aaPredicted RBP13.45□□□□□ -0.26
SH3GLB1-204ENST00000602603 PLCD3Q8N3E9 789 aa13.41□□□□□ -0.26
SH3GLB1-204ENST00000602603 FKBP8Q14318 412 aa13.39□□□□□ -0.27
SH3GLB1-204ENST00000602603 MS4A3Q96HJ5 214 aa13.38□□□□□ -0.27
SH3GLB1-204ENST00000602603 ZBTB47Q9UFB7 747 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 238.9 ms