RNA–Protein interactions for RNA: ENST00000602488.5

CCDC18-AS1-224, CCDC18 antisense RNA 1, humanhuman

TSL 3

Gene CCDC18-AS1, Length 321 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-AS1-224ENST00000602488 AEBP2Q6ZN18 517 aaPredicted RBP32.59■■■□□ 2.81
CCDC18-AS1-224ENST00000602488 CHIC1Q5VXU3 224 aa31.21■■■□□ 2.59
CCDC18-AS1-224ENST00000602488 SENP3Q9H4L4 574 aaPredicted RBP27.78■■■□□ 2.04
CCDC18-AS1-224ENST00000602488 PHF23Q9BUL5 403 aaPredicted RBP27.45■■□□□ 1.98
CCDC18-AS1-224ENST00000602488 FOXD1Q16676 465 aa25.86■■□□□ 1.73
CCDC18-AS1-224ENST00000602488 PLPPR3Q6T4P5 718 aa25.06■■□□□ 1.6
CCDC18-AS1-224ENST00000602488 PPP6R1Q9UPN7 881 aa24.36■■□□□ 1.49
CCDC18-AS1-224ENST00000602488 ADRA2BP18089 450 aa24.3■■□□□ 1.48
CCDC18-AS1-224ENST00000602488 PIAS4Q8N2W9 510 aaPredicted RBP24.23■■□□□ 1.47
CCDC18-AS1-224ENST00000602488 MSH5O43196 834 aa24.11■■□□□ 1.45
CCDC18-AS1-224ENST00000602488 POTEDQ86YR6 584 aa23.09■■□□□ 1.29
CCDC18-AS1-224ENST00000602488 SCAF1Q9H7N4 1312 aaKnown RBP22.26■■□□□ 1.15
CCDC18-AS1-224ENST00000602488 MAPK8IP2Q13387 824 aaPredicted RBP22.24■■□□□ 1.15
CCDC18-AS1-224ENST00000602488 DMRT2Q9Y5R5 561 aa22.07■■□□□ 1.12
CCDC18-AS1-224ENST00000602488 PPP4R3CPQ6ZMV5 832 aa21.99■■□□□ 1.11
CCDC18-AS1-224ENST00000602488 CNKSR2Q8WXI2 1034 aa21.53■■□□□ 1.04
CCDC18-AS1-224ENST00000602488 HOXD11P31277 338 aaPredicted RBP21.36■■□□□ 1.01
CCDC18-AS1-224ENST00000602488 RNF216Q9NWF9 866 aaPredicted RBP21.27■■□□□ 1
CCDC18-AS1-224ENST00000602488 NCBP3Q53F19 620 aaKnown RBP21.24■□□□□ 0.99
CCDC18-AS1-224ENST00000602488 DCAF8L1A6NGE4 600 aa21.16■□□□□ 0.98
CCDC18-AS1-224ENST00000602488 NPM3O75607 178 aaKnown RBP20.91■□□□□ 0.94
CCDC18-AS1-224ENST00000602488 KCNA4P22459 653 aa20.74■□□□□ 0.91
CCDC18-AS1-224ENST00000602488 RNF39Q9H2S5 420 aa20.59■□□□□ 0.89
CCDC18-AS1-224ENST00000602488 DNAJC5BQ9UF47 199 aa20.57■□□□□ 0.88
CCDC18-AS1-224ENST00000602488 CACNB1Q02641 598 aaPredicted RBP20.53■□□□□ 0.88
CCDC18-AS1-224ENST00000602488 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.35■□□□□ 0.85
CCDC18-AS1-224ENST00000602488 C1QBPQ07021 282 aaKnown RBP20.31■□□□□ 0.84
CCDC18-AS1-224ENST00000602488 U3KPZ7 1027 aaPredicted RBP19.95■□□□□ 0.78
CCDC18-AS1-224ENST00000602488 SLC4A2P04920 1241 aa19.9■□□□□ 0.78
CCDC18-AS1-224ENST00000602488 SLC4A1APQ9BWU0 796 aaKnown RBP19.64■□□□□ 0.73
CCDC18-AS1-224ENST00000602488 SPINK5Q9NQ38 1064 aaPredicted RBP19.58■□□□□ 0.72
CCDC18-AS1-224ENST00000602488 CAPN15O75808 1086 aa19.55■□□□□ 0.72
CCDC18-AS1-224ENST00000602488 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.48■□□□□ 0.71
CCDC18-AS1-224ENST00000602488 HNRNPUL2Q1KMD3 747 aaKnown RBP19.48■□□□□ 0.71
CCDC18-AS1-224ENST00000602488 APLP2Q06481 763 aa19.44■□□□□ 0.7
CCDC18-AS1-224ENST00000602488 SAMD1Q6SPF0 538 aaPredicted RBP19.38■□□□□ 0.69
CCDC18-AS1-224ENST00000602488 DSG3P32926 999 aa19.36■□□□□ 0.69
CCDC18-AS1-224ENST00000602488 MYCNP04198 464 aaPredicted RBP19.35■□□□□ 0.69
CCDC18-AS1-224ENST00000602488 TRHP20396 242 aaPredicted RBP19.29■□□□□ 0.68
CCDC18-AS1-224ENST00000602488 FOXD4L1Q9NU39 408 aa19.28■□□□□ 0.68
CCDC18-AS1-224ENST00000602488 ZNF219Q9P2Y4 722 aaPredicted RBP19.27■□□□□ 0.68
CCDC18-AS1-224ENST00000602488 ABCB7O75027 752 aa19.11■□□□□ 0.65
CCDC18-AS1-224ENST00000602488 ZBTB22O15209 634 aa19.06■□□□□ 0.64
CCDC18-AS1-224ENST00000602488 ATF5Q9Y2D1 282 aaPredicted RBP18.87■□□□□ 0.61
CCDC18-AS1-224ENST00000602488 POLA2Q14181 598 aa18.83■□□□□ 0.6
CCDC18-AS1-224ENST00000602488 ATXN8OSP0DMR3 200 aa18.67■□□□□ 0.58
CCDC18-AS1-224ENST00000602488 RBM42Q9BTD8 480 aaKnown RBP18.49■□□□□ 0.55
CCDC18-AS1-224ENST00000602488 ZBTB12Q9Y330 459 aaPredicted RBP18.48■□□□□ 0.55
CCDC18-AS1-224ENST00000602488 CSRNP3Q8WYN3 585 aa18.41■□□□□ 0.54
CCDC18-AS1-224ENST00000602488 EHMT2Q96KQ7 1210 aa18.32■□□□□ 0.52
CCDC18-AS1-224ENST00000602488 OSCARQ8IYS5 282 aa18.22■□□□□ 0.51
CCDC18-AS1-224ENST00000602488 POTEHQ6S545 545 aa18.15■□□□□ 0.5
CCDC18-AS1-224ENST00000602488 FBLN2P98095 1184 aa18.14■□□□□ 0.49
CCDC18-AS1-224ENST00000602488 AKT1S1Q96B36 256 aa18.11■□□□□ 0.49
CCDC18-AS1-224ENST00000602488 MKRN4PQ13434 485 aaPredicted RBP18.02■□□□□ 0.48
CCDC18-AS1-224ENST00000602488 CHRDL2Q6WN34 429 aa17.97■□□□□ 0.47
CCDC18-AS1-224ENST00000602488 REM2Q8IYK8 340 aaPredicted RBP17.94■□□□□ 0.46
CCDC18-AS1-224ENST00000602488 SPDYE2BA6NHP3 402 aa17.93■□□□□ 0.46
CCDC18-AS1-224ENST00000602488 SPDYE6P0CI01 402 aa17.93■□□□□ 0.46
CCDC18-AS1-224ENST00000602488 SPDYE2Q495Y8 402 aa17.93■□□□□ 0.46
CCDC18-AS1-224ENST00000602488 ZNF692Q9BU19 519 aaPredicted RBP17.75■□□□□ 0.43
CCDC18-AS1-224ENST00000602488 PITPNM1O00562 1244 aa17.74■□□□□ 0.43
CCDC18-AS1-224ENST00000602488 SSUH2Q9Y2M2 353 aa17.71■□□□□ 0.43
CCDC18-AS1-224ENST00000602488 PIP4P2Q8N4L2 257 aa17.6■□□□□ 0.41
CCDC18-AS1-224ENST00000602488 SPDYE1Q8NFV5 336 aaPredicted RBP17.55■□□□□ 0.4
CCDC18-AS1-224ENST00000602488 FXR2P51116 673 aaKnown RBP eCLIP17.54■□□□□ 0.4
CCDC18-AS1-224ENST00000602488 CLEC11AQ9Y240 323 aa17.51■□□□□ 0.39
CCDC18-AS1-224ENST00000602488 PABPN1Q86U42 306 aaKnown RBP eCLIP17.49■□□□□ 0.39
CCDC18-AS1-224ENST00000602488 SPDYE4A6NLX3 237 aa17.31■□□□□ 0.36
CCDC18-AS1-224ENST00000602488 PRKAR2AP13861 404 aaKnown RBP17.29■□□□□ 0.36
CCDC18-AS1-224ENST00000602488 PRR29P0C7W0 189 aa17.26■□□□□ 0.35
CCDC18-AS1-224ENST00000602488 HAX1O00165 279 aa17.21■□□□□ 0.35
CCDC18-AS1-224ENST00000602488 CHADLQ6NUI6 762 aa17.14■□□□□ 0.33
CCDC18-AS1-224ENST00000602488 SP7Q8TDD2 431 aaPredicted RBP17.13■□□□□ 0.33
CCDC18-AS1-224ENST00000602488 STAG3Q9UJ98 1225 aa17.08■□□□□ 0.32
CCDC18-AS1-224ENST00000602488 EVX2Q03828 476 aa17■□□□□ 0.31
CCDC18-AS1-224ENST00000602488 C19orf67A6NJJ6 358 aa16.97■□□□□ 0.31
CCDC18-AS1-224ENST00000602488 PROM2Q8N271 834 aa16.92■□□□□ 0.3
CCDC18-AS1-224ENST00000602488 FARP1Q9Y4F1 1045 aaPredicted RBP16.92■□□□□ 0.3
CCDC18-AS1-224ENST00000602488 CREBZFQ9NS37 354 aa16.88■□□□□ 0.29
CCDC18-AS1-224ENST00000602488 CD44P16070 742 aaKnown RBP16.76■□□□□ 0.27
CCDC18-AS1-224ENST00000602488 FKBP8Q14318 412 aa16.7■□□□□ 0.26
CCDC18-AS1-224ENST00000602488 GABBR2O75899 941 aa16.65■□□□□ 0.26
CCDC18-AS1-224ENST00000602488 MNX1P50219 401 aaPredicted RBP16.62■□□□□ 0.25
CCDC18-AS1-224ENST00000602488 NPM1P06748 294 aaKnown RBP eCLIP16.6■□□□□ 0.25
CCDC18-AS1-224ENST00000602488 ZRANB1Q9UGI0 708 aa16.56■□□□□ 0.24
CCDC18-AS1-224ENST00000602488 ZNF579Q8NAF0 562 aaKnown RBP16.51■□□□□ 0.23
CCDC18-AS1-224ENST00000602488 PAK3O75914 559 aaPredicted RBP16.49■□□□□ 0.23
CCDC18-AS1-224ENST00000602488 CLCN6P51797 869 aa16.49■□□□□ 0.23
CCDC18-AS1-224ENST00000602488 MIER1Q8N108 512 aa16.48■□□□□ 0.23
CCDC18-AS1-224ENST00000602488 PLEKHG5O94827 1062 aa16.46■□□□□ 0.23
CCDC18-AS1-224ENST00000602488 PLCD3Q8N3E9 789 aa16.39■□□□□ 0.21
CCDC18-AS1-224ENST00000602488 PHF12Q96QT6 1004 aa16.35■□□□□ 0.21
CCDC18-AS1-224ENST00000602488 POTEIP0CG38 1075 aa16.29■□□□□ 0.2
CCDC18-AS1-224ENST00000602488 TSPYL2Q9H2G4 693 aaPredicted RBP16.29■□□□□ 0.2
CCDC18-AS1-224ENST00000602488 FBXO3Q9UK99 471 aa16.29■□□□□ 0.2
CCDC18-AS1-224ENST00000602488 GALR2O43603 387 aaPredicted RBP16.28■□□□□ 0.2
CCDC18-AS1-224ENST00000602488 DCBLD2Q96PD2 775 aa16.26■□□□□ 0.19
CCDC18-AS1-224ENST00000602488 ZBTB47Q9UFB7 747 aaPredicted RBP16.25■□□□□ 0.19
CCDC18-AS1-224ENST00000602488 RASEFQ8IZ41 740 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms