RNA–Protein interactions for RNA: ENST00000601480.1

LINC00347-207, long intergenic non-protein coding RNA 347, humanhuman

TSL 2

Gene LINC00347, Length 1,094 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-207ENST00000601480 AEBP2Q6ZN18 517 aaPredicted RBP31.3■■■□□ 2.6
LINC00347-207ENST00000601480 CHIC1Q5VXU3 224 aa30.13■■■□□ 2.41
LINC00347-207ENST00000601480 SENP3Q9H4L4 574 aaPredicted RBP26.56■■□□□ 1.84
LINC00347-207ENST00000601480 PHF23Q9BUL5 403 aaPredicted RBP26.49■■□□□ 1.83
LINC00347-207ENST00000601480 FOXD1Q16676 465 aa24.74■■□□□ 1.55
LINC00347-207ENST00000601480 PLPPR3Q6T4P5 718 aa24.25■■□□□ 1.47
LINC00347-207ENST00000601480 PPP6R1Q9UPN7 881 aa23.5■■□□□ 1.35
LINC00347-207ENST00000601480 ADRA2BP18089 450 aa23.43■■□□□ 1.34
LINC00347-207ENST00000601480 PIAS4Q8N2W9 510 aaPredicted RBP23.19■■□□□ 1.3
LINC00347-207ENST00000601480 MSH5O43196 834 aa22.93■■□□□ 1.26
LINC00347-207ENST00000601480 POTEDQ86YR6 584 aa22.5■■□□□ 1.19
LINC00347-207ENST00000601480 MAPK8IP2Q13387 824 aaPredicted RBP21.39■■□□□ 1.01
LINC00347-207ENST00000601480 SCAF1Q9H7N4 1312 aaKnown RBP21.38■■□□□ 1.01
LINC00347-207ENST00000601480 PPP4R3CPQ6ZMV5 832 aa21.33■■□□□ 1.01
LINC00347-207ENST00000601480 DMRT2Q9Y5R5 561 aa21.16■□□□□ 0.98
LINC00347-207ENST00000601480 CNKSR2Q8WXI2 1034 aa20.82■□□□□ 0.92
LINC00347-207ENST00000601480 NCBP3Q53F19 620 aaKnown RBP20.61■□□□□ 0.89
LINC00347-207ENST00000601480 HOXD11P31277 338 aaPredicted RBP20.58■□□□□ 0.89
LINC00347-207ENST00000601480 RNF216Q9NWF9 866 aaPredicted RBP20.53■□□□□ 0.88
LINC00347-207ENST00000601480 KCNA4P22459 653 aa20.38■□□□□ 0.85
LINC00347-207ENST00000601480 NPM3O75607 178 aaKnown RBP20.36■□□□□ 0.85
LINC00347-207ENST00000601480 DCAF8L1A6NGE4 600 aa20.19■□□□□ 0.82
LINC00347-207ENST00000601480 DNAJC5BQ9UF47 199 aa19.88■□□□□ 0.77
LINC00347-207ENST00000601480 RNF39Q9H2S5 420 aa19.65■□□□□ 0.74
LINC00347-207ENST00000601480 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.54■□□□□ 0.72
LINC00347-207ENST00000601480 CACNB1Q02641 598 aaPredicted RBP19.38■□□□□ 0.69
LINC00347-207ENST00000601480 SLC4A2P04920 1241 aa19.35■□□□□ 0.69
LINC00347-207ENST00000601480 C1QBPQ07021 282 aaKnown RBP19.35■□□□□ 0.69
LINC00347-207ENST00000601480 SLC4A1APQ9BWU0 796 aaKnown RBP19.3■□□□□ 0.68
LINC00347-207ENST00000601480 U3KPZ7 1027 aaPredicted RBP19.24■□□□□ 0.67
LINC00347-207ENST00000601480 FOXD4L1Q9NU39 408 aa18.85■□□□□ 0.61
LINC00347-207ENST00000601480 SPINK5Q9NQ38 1064 aaPredicted RBP18.82■□□□□ 0.6
LINC00347-207ENST00000601480 MYCNP04198 464 aaPredicted RBP18.8■□□□□ 0.6
LINC00347-207ENST00000601480 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.79■□□□□ 0.6
LINC00347-207ENST00000601480 HNRNPUL2Q1KMD3 747 aaKnown RBP18.79■□□□□ 0.6
LINC00347-207ENST00000601480 ZBTB22O15209 634 aa18.78■□□□□ 0.6
LINC00347-207ENST00000601480 CAPN15O75808 1086 aa18.71■□□□□ 0.59
LINC00347-207ENST00000601480 SAMD1Q6SPF0 538 aaPredicted RBP18.71■□□□□ 0.59
LINC00347-207ENST00000601480 APLP2Q06481 763 aa18.67■□□□□ 0.58
LINC00347-207ENST00000601480 DSG3P32926 999 aa18.55■□□□□ 0.56
LINC00347-207ENST00000601480 TRHP20396 242 aaPredicted RBP18.53■□□□□ 0.56
LINC00347-207ENST00000601480 ZNF219Q9P2Y4 722 aaPredicted RBP18.52■□□□□ 0.56
LINC00347-207ENST00000601480 ATF5Q9Y2D1 282 aaPredicted RBP18.38■□□□□ 0.53
LINC00347-207ENST00000601480 ABCB7O75027 752 aa18.34■□□□□ 0.53
LINC00347-207ENST00000601480 CSRNP3Q8WYN3 585 aa18.31■□□□□ 0.52
LINC00347-207ENST00000601480 EHMT2Q96KQ7 1210 aa18.26■□□□□ 0.51
LINC00347-207ENST00000601480 ATXN8OSP0DMR3 200 aa18.24■□□□□ 0.51
LINC00347-207ENST00000601480 POLA2Q14181 598 aa18.16■□□□□ 0.5
LINC00347-207ENST00000601480 ZBTB12Q9Y330 459 aaPredicted RBP17.79■□□□□ 0.44
LINC00347-207ENST00000601480 RBM42Q9BTD8 480 aaKnown RBP17.64■□□□□ 0.41
LINC00347-207ENST00000601480 MKRN4PQ13434 485 aaPredicted RBP17.56■□□□□ 0.4
LINC00347-207ENST00000601480 OSCARQ8IYS5 282 aa17.56■□□□□ 0.4
LINC00347-207ENST00000601480 FBLN2P98095 1184 aa17.54■□□□□ 0.4
LINC00347-207ENST00000601480 POTEHQ6S545 545 aa17.5■□□□□ 0.39
LINC00347-207ENST00000601480 AKT1S1Q96B36 256 aa17.35■□□□□ 0.37
LINC00347-207ENST00000601480 SPDYE2BA6NHP3 402 aa17.31■□□□□ 0.36
LINC00347-207ENST00000601480 SPDYE6P0CI01 402 aa17.31■□□□□ 0.36
LINC00347-207ENST00000601480 SPDYE2Q495Y8 402 aa17.31■□□□□ 0.36
LINC00347-207ENST00000601480 REM2Q8IYK8 340 aaPredicted RBP17.2■□□□□ 0.34
LINC00347-207ENST00000601480 ZNF692Q9BU19 519 aaPredicted RBP17.16■□□□□ 0.34
LINC00347-207ENST00000601480 SSUH2Q9Y2M2 353 aa17.16■□□□□ 0.34
LINC00347-207ENST00000601480 CHRDL2Q6WN34 429 aa17.09■□□□□ 0.33
LINC00347-207ENST00000601480 PITPNM1O00562 1244 aa17.01■□□□□ 0.31
LINC00347-207ENST00000601480 PABPN1Q86U42 306 aaKnown RBP eCLIP16.93■□□□□ 0.3
LINC00347-207ENST00000601480 SPDYE4A6NLX3 237 aa16.91■□□□□ 0.3
LINC00347-207ENST00000601480 SPDYE1Q8NFV5 336 aaPredicted RBP16.88■□□□□ 0.29
LINC00347-207ENST00000601480 CLEC11AQ9Y240 323 aa16.81■□□□□ 0.28
LINC00347-207ENST00000601480 PIP4P2Q8N4L2 257 aa16.8■□□□□ 0.28
LINC00347-207ENST00000601480 FXR2P51116 673 aaKnown RBP eCLIP16.79■□□□□ 0.28
LINC00347-207ENST00000601480 PROM2Q8N271 834 aa16.63■□□□□ 0.25
LINC00347-207ENST00000601480 PRR29P0C7W0 189 aa16.61■□□□□ 0.25
LINC00347-207ENST00000601480 PRKAR2AP13861 404 aaKnown RBP16.56■□□□□ 0.24
LINC00347-207ENST00000601480 STAG3Q9UJ98 1225 aa16.54■□□□□ 0.24
LINC00347-207ENST00000601480 FKBP8Q14318 412 aa16.53■□□□□ 0.24
LINC00347-207ENST00000601480 CHADLQ6NUI6 762 aa16.48■□□□□ 0.23
LINC00347-207ENST00000601480 CREBZFQ9NS37 354 aa16.35■□□□□ 0.21
LINC00347-207ENST00000601480 HAX1O00165 279 aa16.33■□□□□ 0.2
LINC00347-207ENST00000601480 FARP1Q9Y4F1 1045 aaPredicted RBP16.28■□□□□ 0.2
LINC00347-207ENST00000601480 C19orf67A6NJJ6 358 aa16.23■□□□□ 0.19
LINC00347-207ENST00000601480 EVX2Q03828 476 aa16.23■□□□□ 0.19
LINC00347-207ENST00000601480 SP7Q8TDD2 431 aaPredicted RBP16.18■□□□□ 0.18
LINC00347-207ENST00000601480 MNX1P50219 401 aaPredicted RBP16.17■□□□□ 0.18
LINC00347-207ENST00000601480 CD44P16070 742 aaKnown RBP16.06■□□□□ 0.16
LINC00347-207ENST00000601480 MIER1Q8N108 512 aa16.05■□□□□ 0.16
LINC00347-207ENST00000601480 FBXO3Q9UK99 471 aa16.03■□□□□ 0.16
LINC00347-207ENST00000601480 NPM1P06748 294 aaKnown RBP eCLIP16.01■□□□□ 0.15
LINC00347-207ENST00000601480 PLCD3Q8N3E9 789 aa15.98■□□□□ 0.15
LINC00347-207ENST00000601480 PLEKHG5O94827 1062 aa15.96■□□□□ 0.15
LINC00347-207ENST00000601480 ZRANB1Q9UGI0 708 aa15.89■□□□□ 0.13
LINC00347-207ENST00000601480 GABBR2O75899 941 aa15.87■□□□□ 0.13
LINC00347-207ENST00000601480 VASPP50552 380 aaPredicted RBP15.86■□□□□ 0.13
LINC00347-207ENST00000601480 ZNF579Q8NAF0 562 aaKnown RBP15.85■□□□□ 0.13
LINC00347-207ENST00000601480 PAK3O75914 559 aaPredicted RBP15.82■□□□□ 0.12
LINC00347-207ENST00000601480 ZBTB47Q9UFB7 747 aaPredicted RBP15.82■□□□□ 0.12
LINC00347-207ENST00000601480 RASEFQ8IZ41 740 aa15.77■□□□□ 0.12
LINC00347-207ENST00000601480 CLCN6P51797 869 aa15.75■□□□□ 0.11
LINC00347-207ENST00000601480 NUBP1P53384 320 aa15.75■□□□□ 0.11
LINC00347-207ENST00000601480 TSPYL2Q9H2G4 693 aaPredicted RBP15.75■□□□□ 0.11
LINC00347-207ENST00000601480 PHF12Q96QT6 1004 aa15.74■□□□□ 0.11
LINC00347-207ENST00000601480 CCDC61Q9Y6R9 512 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms