RNA–Protein interactions for RNA: ENST00000601045.1

TTC9C-206, Transcript of tetratricopeptide repeat domain 9C, humanhuman

Gene TTC9C, Length 346 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9C-206ENST00000601045 AEBP2Q6ZN18 517 aaPredicted RBP25.48■■□□□ 1.67
TTC9C-206ENST00000601045 CHIC1Q5VXU3 224 aa24.97■■□□□ 1.59
TTC9C-206ENST00000601045 PHF23Q9BUL5 403 aaPredicted RBP22■■□□□ 1.11
TTC9C-206ENST00000601045 SENP3Q9H4L4 574 aaPredicted RBP21.59■■□□□ 1.05
TTC9C-206ENST00000601045 PLPPR3Q6T4P5 718 aa20.33■□□□□ 0.85
TTC9C-206ENST00000601045 FOXD1Q16676 465 aa20.05■□□□□ 0.8
TTC9C-206ENST00000601045 PPP6R1Q9UPN7 881 aa19.4■□□□□ 0.7
TTC9C-206ENST00000601045 ADRA2BP18089 450 aa19.39■□□□□ 0.69
TTC9C-206ENST00000601045 PIAS4Q8N2W9 510 aaPredicted RBP18.93■□□□□ 0.62
TTC9C-206ENST00000601045 MSH5O43196 834 aa18.42■□□□□ 0.54
TTC9C-206ENST00000601045 PPP4R3CPQ6ZMV5 832 aa17.95■□□□□ 0.46
TTC9C-206ENST00000601045 SCAF1Q9H7N4 1312 aaKnown RBP17.72■□□□□ 0.43
TTC9C-206ENST00000601045 KCNA4P22459 653 aa17.66■□□□□ 0.42
TTC9C-206ENST00000601045 MAPK8IP2Q13387 824 aaPredicted RBP17.58■□□□□ 0.4
TTC9C-206ENST00000601045 NCBP3Q53F19 620 aaKnown RBP17.5■□□□□ 0.39
TTC9C-206ENST00000601045 CNKSR2Q8WXI2 1034 aa17.4■□□□□ 0.38
TTC9C-206ENST00000601045 NPM3O75607 178 aaKnown RBP17.25■□□□□ 0.35
TTC9C-206ENST00000601045 DMRT2Q9Y5R5 561 aa17.25■□□□□ 0.35
TTC9C-206ENST00000601045 RNF216Q9NWF9 866 aaPredicted RBP17.04■□□□□ 0.32
TTC9C-206ENST00000601045 HOXD11P31277 338 aaPredicted RBP16.93■□□□□ 0.3
TTC9C-206ENST00000601045 SLC4A1APQ9BWU0 796 aaKnown RBP16.83■□□□□ 0.28
TTC9C-206ENST00000601045 DNAJC5BQ9UF47 199 aa16.66■□□□□ 0.26
TTC9C-206ENST00000601045 POTEDQ86YR6 584 aa16.61■□□□□ 0.25
TTC9C-206ENST00000601045 DCAF8L1A6NGE4 600 aa16.56■□□□□ 0.24
TTC9C-206ENST00000601045 EHMT2Q96KQ7 1210 aa16.51■□□□□ 0.23
TTC9C-206ENST00000601045 SLC4A2P04920 1241 aa16.26■□□□□ 0.19
TTC9C-206ENST00000601045 ZBTB22O15209 634 aa16.25■□□□□ 0.19
TTC9C-206ENST00000601045 CSRNP3Q8WYN3 585 aa16.25■□□□□ 0.19
TTC9C-206ENST00000601045 FOXD4L1Q9NU39 408 aa16.19■□□□□ 0.18
TTC9C-206ENST00000601045 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.18■□□□□ 0.18
TTC9C-206ENST00000601045 MYCNP04198 464 aaPredicted RBP15.91■□□□□ 0.14
TTC9C-206ENST00000601045 U3KPZ7 1027 aaPredicted RBP15.9■□□□□ 0.14
TTC9C-206ENST00000601045 RNF39Q9H2S5 420 aa15.8■□□□□ 0.12
TTC9C-206ENST00000601045 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.72■□□□□ 0.11
TTC9C-206ENST00000601045 HNRNPUL2Q1KMD3 747 aaKnown RBP15.72■□□□□ 0.11
TTC9C-206ENST00000601045 SAMD1Q6SPF0 538 aaPredicted RBP15.68■□□□□ 0.1
TTC9C-206ENST00000601045 ATXN8OSP0DMR3 200 aa15.61■□□□□ 0.09
TTC9C-206ENST00000601045 C1QBPQ07021 282 aaKnown RBP15.61■□□□□ 0.09
TTC9C-206ENST00000601045 APLP2Q06481 763 aa15.53■□□□□ 0.08
TTC9C-206ENST00000601045 ATF5Q9Y2D1 282 aaPredicted RBP15.52■□□□□ 0.08
TTC9C-206ENST00000601045 SPINK5Q9NQ38 1064 aaPredicted RBP15.45■□□□□ 0.06
TTC9C-206ENST00000601045 CAPN15O75808 1086 aa15.39■□□□□ 0.05
TTC9C-206ENST00000601045 TRHP20396 242 aaPredicted RBP15.35■□□□□ 0.05
TTC9C-206ENST00000601045 CACNB1Q02641 598 aaPredicted RBP15.35■□□□□ 0.05
TTC9C-206ENST00000601045 ZNF219Q9P2Y4 722 aaPredicted RBP15.3■□□□□ 0.04
TTC9C-206ENST00000601045 POLA2Q14181 598 aa15.13■□□□□ 0.01
TTC9C-206ENST00000601045 ABCB7O75027 752 aa15.11■□□□□ 0.01
TTC9C-206ENST00000601045 DSG3P32926 999 aa15.08■□□□□ 0
TTC9C-206ENST00000601045 FBLN2P98095 1184 aa14.85□□□□□ -0.03
TTC9C-206ENST00000601045 MKRN4PQ13434 485 aaPredicted RBP14.84□□□□□ -0.03
TTC9C-206ENST00000601045 ZBTB12Q9Y330 459 aaPredicted RBP14.83□□□□□ -0.04
TTC9C-206ENST00000601045 FKBP8Q14318 412 aa14.69□□□□□ -0.06
TTC9C-206ENST00000601045 OSCARQ8IYS5 282 aa14.58□□□□□ -0.08
TTC9C-206ENST00000601045 SPDYE4A6NLX3 237 aa14.56□□□□□ -0.08
TTC9C-206ENST00000601045 SPDYE2BA6NHP3 402 aa14.44□□□□□ -0.1
TTC9C-206ENST00000601045 SPDYE6P0CI01 402 aa14.44□□□□□ -0.1
TTC9C-206ENST00000601045 SPDYE2Q495Y8 402 aa14.44□□□□□ -0.1
TTC9C-206ENST00000601045 ZNF692Q9BU19 519 aaPredicted RBP14.44□□□□□ -0.1
TTC9C-206ENST00000601045 RBM42Q9BTD8 480 aaKnown RBP14.35□□□□□ -0.11
TTC9C-206ENST00000601045 SSUH2Q9Y2M2 353 aa14.34□□□□□ -0.11
TTC9C-206ENST00000601045 PROM2Q8N271 834 aa14.29□□□□□ -0.12
TTC9C-206ENST00000601045 PABPN1Q86U42 306 aaKnown RBP eCLIP14.26□□□□□ -0.13
TTC9C-206ENST00000601045 AKT1S1Q96B36 256 aa14.2□□□□□ -0.14
TTC9C-206ENST00000601045 FBXO3Q9UK99 471 aa14.11□□□□□ -0.15
TTC9C-206ENST00000601045 REM2Q8IYK8 340 aaPredicted RBP14.09□□□□□ -0.15
TTC9C-206ENST00000601045 STAG3Q9UJ98 1225 aa14.01□□□□□ -0.17
TTC9C-206ENST00000601045 SPDYE1Q8NFV5 336 aaPredicted RBP14□□□□□ -0.17
TTC9C-206ENST00000601045 CLEC11AQ9Y240 323 aa13.98□□□□□ -0.17
TTC9C-206ENST00000601045 PITPNM1O00562 1244 aa13.92□□□□□ -0.18
TTC9C-206ENST00000601045 VASPP50552 380 aaPredicted RBP13.92□□□□□ -0.18
TTC9C-206ENST00000601045 PRR29P0C7W0 189 aa13.85□□□□□ -0.19
TTC9C-206ENST00000601045 MIER1Q8N108 512 aa13.83□□□□□ -0.2
TTC9C-206ENST00000601045 PLCD3Q8N3E9 789 aa13.8□□□□□ -0.2
TTC9C-206ENST00000601045 IFNLR1Q8IU57 520 aaPredicted RBP13.76□□□□□ -0.21
TTC9C-206ENST00000601045 CHRDL2Q6WN34 429 aa13.73□□□□□ -0.21
TTC9C-206ENST00000601045 PLEKHG5O94827 1062 aa13.71□□□□□ -0.21
TTC9C-206ENST00000601045 KLHL34Q8N239 644 aa13.7□□□□□ -0.22
TTC9C-206ENST00000601045 CREBZFQ9NS37 354 aa13.69□□□□□ -0.22
TTC9C-206ENST00000601045 FXR2P51116 673 aaKnown RBP eCLIP13.63□□□□□ -0.23
TTC9C-206ENST00000601045 CHADLQ6NUI6 762 aa13.62□□□□□ -0.23
TTC9C-206ENST00000601045 ZBTB47Q9UFB7 747 aaPredicted RBP13.6□□□□□ -0.23
TTC9C-206ENST00000601045 PIP4P2Q8N4L2 257 aa13.59□□□□□ -0.23
TTC9C-206ENST00000601045 PRKAR2AP13861 404 aaKnown RBP13.58□□□□□ -0.24
TTC9C-206ENST00000601045 SPOCK2Q92563 424 aa13.57□□□□□ -0.24
TTC9C-206ENST00000601045 MNX1P50219 401 aaPredicted RBP13.55□□□□□ -0.24
TTC9C-206ENST00000601045 AMER1Q5JTC6 1135 aaPredicted RBP13.54□□□□□ -0.24
TTC9C-206ENST00000601045 RTN4Q9NQC3 1192 aaKnown RBP13.54□□□□□ -0.24
TTC9C-206ENST00000601045 FARP1Q9Y4F1 1045 aaPredicted RBP13.49□□□□□ -0.25
TTC9C-206ENST00000601045 NPM1P06748 294 aaKnown RBP eCLIP13.46□□□□□ -0.25
TTC9C-206ENST00000601045 NUBP1P53384 320 aa13.43□□□□□ -0.26
TTC9C-206ENST00000601045 CIZ1Q9ULV3 898 aaPredicted RBP13.37□□□□□ -0.27
TTC9C-206ENST00000601045 RASEFQ8IZ41 740 aa13.36□□□□□ -0.27
TTC9C-206ENST00000601045 DCAF8Q5TAQ9 597 aa13.34□□□□□ -0.27
TTC9C-206ENST00000601045 PKD2Q13563 968 aa13.33□□□□□ -0.28
TTC9C-206ENST00000601045 FAM212AQ96EL1 285 aa13.31□□□□□ -0.28
TTC9C-206ENST00000601045 GSE1Q14687 1217 aa13.3□□□□□ -0.28
TTC9C-206ENST00000601045 TSPYL2Q9H2G4 693 aaPredicted RBP13.28□□□□□ -0.28
TTC9C-206ENST00000601045 ECM2O94769 699 aaPredicted RBP13.24□□□□□ -0.29
TTC9C-206ENST00000601045 PAK3O75914 559 aaPredicted RBP13.2□□□□□ -0.3
TTC9C-206ENST00000601045 CD44P16070 742 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms