RNA–Protein interactions for RNA: ENST00000600953.3

LINC01435-211, Transcript of long intergenic non-protein coding RNA 1435, humanhuman

TSL 5

Gene LINC01435, Length 634 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01435-211ENST00000600953 AEBP2Q6ZN18 517 aaPredicted RBP23.42■■□□□ 1.34
LINC01435-211ENST00000600953 CHIC1Q5VXU3 224 aa22.24■■□□□ 1.15
LINC01435-211ENST00000600953 SENP3Q9H4L4 574 aaPredicted RBP19.69■□□□□ 0.74
LINC01435-211ENST00000600953 PHF23Q9BUL5 403 aaPredicted RBP19.65■□□□□ 0.74
LINC01435-211ENST00000600953 FOXD1Q16676 465 aa18.52■□□□□ 0.56
LINC01435-211ENST00000600953 PLPPR3Q6T4P5 718 aa17.75■□□□□ 0.43
LINC01435-211ENST00000600953 PPP6R1Q9UPN7 881 aa17.54■□□□□ 0.4
LINC01435-211ENST00000600953 ADRA2BP18089 450 aa17.45■□□□□ 0.38
LINC01435-211ENST00000600953 PIAS4Q8N2W9 510 aaPredicted RBP17.25■□□□□ 0.35
LINC01435-211ENST00000600953 MSH5O43196 834 aa17.05■□□□□ 0.32
LINC01435-211ENST00000600953 POTEDQ86YR6 584 aa16.56■□□□□ 0.24
LINC01435-211ENST00000600953 MAPK8IP2Q13387 824 aaPredicted RBP16.04■□□□□ 0.16
LINC01435-211ENST00000600953 DMRT2Q9Y5R5 561 aa15.7■□□□□ 0.1
LINC01435-211ENST00000600953 PPP4R3CPQ6ZMV5 832 aa15.68■□□□□ 0.1
LINC01435-211ENST00000600953 SCAF1Q9H7N4 1312 aaKnown RBP15.68■□□□□ 0.1
LINC01435-211ENST00000600953 CNKSR2Q8WXI2 1034 aa15.26■□□□□ 0.03
LINC01435-211ENST00000600953 HOXD11P31277 338 aaPredicted RBP15.19■□□□□ 0.02
LINC01435-211ENST00000600953 DCAF8L1A6NGE4 600 aa15.08■□□□□ 0
LINC01435-211ENST00000600953 RNF216Q9NWF9 866 aaPredicted RBP15.08■□□□□ 0
LINC01435-211ENST00000600953 NCBP3Q53F19 620 aaKnown RBP14.95□□□□□ -0.02
LINC01435-211ENST00000600953 NPM3O75607 178 aaKnown RBP14.93□□□□□ -0.02
LINC01435-211ENST00000600953 KCNA4P22459 653 aa14.84□□□□□ -0.03
LINC01435-211ENST00000600953 RNF39Q9H2S5 420 aa14.68□□□□□ -0.06
LINC01435-211ENST00000600953 CACNB1Q02641 598 aaPredicted RBP14.63□□□□□ -0.07
LINC01435-211ENST00000600953 DNAJC5BQ9UF47 199 aa14.48□□□□□ -0.09
LINC01435-211ENST00000600953 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.45□□□□□ -0.1
LINC01435-211ENST00000600953 C1QBPQ07021 282 aaKnown RBP14.38□□□□□ -0.11
LINC01435-211ENST00000600953 SLC4A2P04920 1241 aa14.28□□□□□ -0.12
LINC01435-211ENST00000600953 U3KPZ7 1027 aaPredicted RBP14.26□□□□□ -0.13
LINC01435-211ENST00000600953 SPINK5Q9NQ38 1064 aaPredicted RBP14.06□□□□□ -0.16
LINC01435-211ENST00000600953 SLC4A1APQ9BWU0 796 aaKnown RBP13.94□□□□□ -0.18
LINC01435-211ENST00000600953 CAPN15O75808 1086 aa13.91□□□□□ -0.18
LINC01435-211ENST00000600953 DSG3P32926 999 aa13.83□□□□□ -0.2
LINC01435-211ENST00000600953 TRHP20396 242 aaPredicted RBP13.77□□□□□ -0.21
LINC01435-211ENST00000600953 ZBTB22O15209 634 aa13.72□□□□□ -0.21
LINC01435-211ENST00000600953 ABCB7O75027 752 aa13.7□□□□□ -0.22
LINC01435-211ENST00000600953 MYCNP04198 464 aaPredicted RBP13.68□□□□□ -0.22
LINC01435-211ENST00000600953 FOXD4L1Q9NU39 408 aa13.66□□□□□ -0.22
LINC01435-211ENST00000600953 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.65□□□□□ -0.22
LINC01435-211ENST00000600953 HNRNPUL2Q1KMD3 747 aaKnown RBP13.65□□□□□ -0.22
LINC01435-211ENST00000600953 SAMD1Q6SPF0 538 aaPredicted RBP13.64□□□□□ -0.23
LINC01435-211ENST00000600953 ATF5Q9Y2D1 282 aaPredicted RBP13.6□□□□□ -0.23
LINC01435-211ENST00000600953 ZNF219Q9P2Y4 722 aaPredicted RBP13.59□□□□□ -0.23
LINC01435-211ENST00000600953 APLP2Q06481 763 aa13.56□□□□□ -0.24
LINC01435-211ENST00000600953 POLA2Q14181 598 aa13.43□□□□□ -0.26
LINC01435-211ENST00000600953 CSRNP3Q8WYN3 585 aa13.18□□□□□ -0.3
LINC01435-211ENST00000600953 ATXN8OSP0DMR3 200 aa13.14□□□□□ -0.31
LINC01435-211ENST00000600953 EHMT2Q96KQ7 1210 aa13.07□□□□□ -0.32
LINC01435-211ENST00000600953 OSCARQ8IYS5 282 aa13□□□□□ -0.33
LINC01435-211ENST00000600953 RBM42Q9BTD8 480 aaKnown RBP13□□□□□ -0.33
LINC01435-211ENST00000600953 POTEHQ6S545 545 aa12.96□□□□□ -0.33
LINC01435-211ENST00000600953 ZBTB12Q9Y330 459 aaPredicted RBP12.94□□□□□ -0.34
LINC01435-211ENST00000600953 MKRN4PQ13434 485 aaPredicted RBP12.93□□□□□ -0.34
LINC01435-211ENST00000600953 AKT1S1Q96B36 256 aa12.82□□□□□ -0.36
LINC01435-211ENST00000600953 CHRDL2Q6WN34 429 aa12.79□□□□□ -0.36
LINC01435-211ENST00000600953 REM2Q8IYK8 340 aaPredicted RBP12.79□□□□□ -0.36
LINC01435-211ENST00000600953 FBLN2P98095 1184 aa12.77□□□□□ -0.37
LINC01435-211ENST00000600953 SPDYE2BA6NHP3 402 aa12.66□□□□□ -0.38
LINC01435-211ENST00000600953 PITPNM1O00562 1244 aa12.66□□□□□ -0.38
LINC01435-211ENST00000600953 SPDYE6P0CI01 402 aa12.66□□□□□ -0.38
LINC01435-211ENST00000600953 SPDYE2Q495Y8 402 aa12.66□□□□□ -0.38
LINC01435-211ENST00000600953 ZNF692Q9BU19 519 aaPredicted RBP12.6□□□□□ -0.39
LINC01435-211ENST00000600953 SSUH2Q9Y2M2 353 aa12.58□□□□□ -0.4
LINC01435-211ENST00000600953 PIP4P2Q8N4L2 257 aa12.57□□□□□ -0.4
LINC01435-211ENST00000600953 FXR2P51116 673 aaKnown RBP eCLIP12.5□□□□□ -0.41
LINC01435-211ENST00000600953 CLEC11AQ9Y240 323 aa12.47□□□□□ -0.41
LINC01435-211ENST00000600953 PABPN1Q86U42 306 aaKnown RBP eCLIP12.45□□□□□ -0.42
LINC01435-211ENST00000600953 SPDYE1Q8NFV5 336 aaPredicted RBP12.39□□□□□ -0.43
LINC01435-211ENST00000600953 PRKAR2AP13861 404 aaKnown RBP12.32□□□□□ -0.44
LINC01435-211ENST00000600953 EVX2Q03828 476 aa12.32□□□□□ -0.44
LINC01435-211ENST00000600953 CHADLQ6NUI6 762 aa12.32□□□□□ -0.44
LINC01435-211ENST00000600953 SPDYE4A6NLX3 237 aa12.28□□□□□ -0.44
LINC01435-211ENST00000600953 HAX1O00165 279 aa12.27□□□□□ -0.45
LINC01435-211ENST00000600953 PRR29P0C7W0 189 aa12.24□□□□□ -0.45
LINC01435-211ENST00000600953 SP7Q8TDD2 431 aaPredicted RBP12.2□□□□□ -0.46
LINC01435-211ENST00000600953 C19orf67A6NJJ6 358 aa12.09□□□□□ -0.47
LINC01435-211ENST00000600953 CREBZFQ9NS37 354 aa12.06□□□□□ -0.48
LINC01435-211ENST00000600953 FARP1Q9Y4F1 1045 aaPredicted RBP12.04□□□□□ -0.48
LINC01435-211ENST00000600953 PROM2Q8N271 834 aa12.02□□□□□ -0.49
LINC01435-211ENST00000600953 STAG3Q9UJ98 1225 aa11.99□□□□□ -0.49
LINC01435-211ENST00000600953 GABBR2O75899 941 aa11.91□□□□□ -0.5
LINC01435-211ENST00000600953 CD44P16070 742 aaKnown RBP11.91□□□□□ -0.5
LINC01435-211ENST00000600953 MNX1P50219 401 aaPredicted RBP11.9□□□□□ -0.5
LINC01435-211ENST00000600953 FKBP8Q14318 412 aa11.88□□□□□ -0.51
LINC01435-211ENST00000600953 ZRANB1Q9UGI0 708 aa11.79□□□□□ -0.52
LINC01435-211ENST00000600953 POTEIP0CG38 1075 aa11.75□□□□□ -0.53
LINC01435-211ENST00000600953 PHF12Q96QT6 1004 aa11.71□□□□□ -0.53
LINC01435-211ENST00000600953 MIER1Q8N108 512 aa11.7□□□□□ -0.54
LINC01435-211ENST00000600953 ZNF579Q8NAF0 562 aaKnown RBP11.7□□□□□ -0.54
LINC01435-211ENST00000600953 GALR2O43603 387 aaPredicted RBP11.67□□□□□ -0.54
LINC01435-211ENST00000600953 NPM1P06748 294 aaKnown RBP eCLIP11.67□□□□□ -0.54
LINC01435-211ENST00000600953 TSPYL2Q9H2G4 693 aaPredicted RBP11.63□□□□□ -0.55
LINC01435-211ENST00000600953 RASEFQ8IZ41 740 aa11.59□□□□□ -0.55
LINC01435-211ENST00000600953 PLCD3Q8N3E9 789 aa11.58□□□□□ -0.56
LINC01435-211ENST00000600953 PAK3O75914 559 aaPredicted RBP11.56□□□□□ -0.56
LINC01435-211ENST00000600953 CCDC61Q9Y6R9 512 aa11.54□□□□□ -0.56
LINC01435-211ENST00000600953 MS4A3Q96HJ5 214 aa11.53□□□□□ -0.56
LINC01435-211ENST00000600953 DCBLD2Q96PD2 775 aa11.52□□□□□ -0.57
LINC01435-211ENST00000600953 CLCN6P51797 869 aa11.51□□□□□ -0.57
LINC01435-211ENST00000600953 NUBP1P53384 320 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms