RNA–Protein interactions for RNA: ENST00000600557.1

CD33-206, Transcript of CD33 molecule, humanhuman

TSL 4

Gene CD33, Length 536 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD33-206ENST00000600557 AEBP2Q6ZN18 517 aaPredicted RBP18.62■□□□□ 0.57
CD33-206ENST00000600557 CHIC1Q5VXU3 224 aa17.89■□□□□ 0.45
CD33-206ENST00000600557 SENP3Q9H4L4 574 aaPredicted RBP15.9■□□□□ 0.14
CD33-206ENST00000600557 PHF23Q9BUL5 403 aaPredicted RBP15.72■□□□□ 0.11
CD33-206ENST00000600557 FOXD1Q16676 465 aa14.77□□□□□ -0.05
CD33-206ENST00000600557 PLPPR3Q6T4P5 718 aa14.41□□□□□ -0.1
CD33-206ENST00000600557 PPP6R1Q9UPN7 881 aa13.95□□□□□ -0.18
CD33-206ENST00000600557 ADRA2BP18089 450 aa13.93□□□□□ -0.18
CD33-206ENST00000600557 PIAS4Q8N2W9 510 aaPredicted RBP13.86□□□□□ -0.19
CD33-206ENST00000600557 MSH5O43196 834 aa13.79□□□□□ -0.2
CD33-206ENST00000600557 POTEDQ86YR6 584 aa13.12□□□□□ -0.31
CD33-206ENST00000600557 SCAF1Q9H7N4 1312 aaKnown RBP12.81□□□□□ -0.36
CD33-206ENST00000600557 MAPK8IP2Q13387 824 aaPredicted RBP12.74□□□□□ -0.37
CD33-206ENST00000600557 PPP4R3CPQ6ZMV5 832 aa12.65□□□□□ -0.38
CD33-206ENST00000600557 DMRT2Q9Y5R5 561 aa12.63□□□□□ -0.39
CD33-206ENST00000600557 CNKSR2Q8WXI2 1034 aa12.38□□□□□ -0.43
CD33-206ENST00000600557 NCBP3Q53F19 620 aaKnown RBP12.25□□□□□ -0.45
CD33-206ENST00000600557 HOXD11P31277 338 aaPredicted RBP12.24□□□□□ -0.45
CD33-206ENST00000600557 RNF216Q9NWF9 866 aaPredicted RBP12.21□□□□□ -0.45
CD33-206ENST00000600557 DCAF8L1A6NGE4 600 aa12.12□□□□□ -0.47
CD33-206ENST00000600557 NPM3O75607 178 aaKnown RBP12.02□□□□□ -0.49
CD33-206ENST00000600557 KCNA4P22459 653 aa11.94□□□□□ -0.5
CD33-206ENST00000600557 DNAJC5BQ9UF47 199 aa11.81□□□□□ -0.52
CD33-206ENST00000600557 RNF39Q9H2S5 420 aa11.76□□□□□ -0.53
CD33-206ENST00000600557 CACNB1Q02641 598 aaPredicted RBP11.72□□□□□ -0.53
CD33-206ENST00000600557 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.69□□□□□ -0.54
CD33-206ENST00000600557 C1QBPQ07021 282 aaKnown RBP11.63□□□□□ -0.55
CD33-206ENST00000600557 SLC4A2P04920 1241 aa11.42□□□□□ -0.58
CD33-206ENST00000600557 U3KPZ7 1027 aaPredicted RBP11.42□□□□□ -0.58
CD33-206ENST00000600557 SLC4A1APQ9BWU0 796 aaKnown RBP11.34□□□□□ -0.59
CD33-206ENST00000600557 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.22□□□□□ -0.61
CD33-206ENST00000600557 HNRNPUL2Q1KMD3 747 aaKnown RBP11.22□□□□□ -0.61
CD33-206ENST00000600557 CAPN15O75808 1086 aa11.21□□□□□ -0.61
CD33-206ENST00000600557 SPINK5Q9NQ38 1064 aaPredicted RBP11.2□□□□□ -0.62
CD33-206ENST00000600557 APLP2Q06481 763 aa11.19□□□□□ -0.62
CD33-206ENST00000600557 SAMD1Q6SPF0 538 aaPredicted RBP11.14□□□□□ -0.63
CD33-206ENST00000600557 MYCNP04198 464 aaPredicted RBP11.13□□□□□ -0.63
CD33-206ENST00000600557 FOXD4L1Q9NU39 408 aa11.11□□□□□ -0.63
CD33-206ENST00000600557 DSG3P32926 999 aa11.08□□□□□ -0.64
CD33-206ENST00000600557 TRHP20396 242 aaPredicted RBP11.07□□□□□ -0.64
CD33-206ENST00000600557 ZNF219Q9P2Y4 722 aaPredicted RBP11.06□□□□□ -0.64
CD33-206ENST00000600557 ZBTB22O15209 634 aa10.95□□□□□ -0.66
CD33-206ENST00000600557 ABCB7O75027 752 aa10.94□□□□□ -0.66
CD33-206ENST00000600557 ATF5Q9Y2D1 282 aaPredicted RBP10.83□□□□□ -0.68
CD33-206ENST00000600557 POLA2Q14181 598 aa10.82□□□□□ -0.68
CD33-206ENST00000600557 ATXN8OSP0DMR3 200 aa10.77□□□□□ -0.69
CD33-206ENST00000600557 CSRNP3Q8WYN3 585 aa10.66□□□□□ -0.7
CD33-206ENST00000600557 ZBTB12Q9Y330 459 aaPredicted RBP10.62□□□□□ -0.71
CD33-206ENST00000600557 EHMT2Q96KQ7 1210 aa10.61□□□□□ -0.71
CD33-206ENST00000600557 RBM42Q9BTD8 480 aaKnown RBP10.6□□□□□ -0.71
CD33-206ENST00000600557 FBLN2P98095 1184 aa10.44□□□□□ -0.74
CD33-206ENST00000600557 OSCARQ8IYS5 282 aa10.43□□□□□ -0.74
CD33-206ENST00000600557 AKT1S1Q96B36 256 aa10.39□□□□□ -0.75
CD33-206ENST00000600557 MKRN4PQ13434 485 aaPredicted RBP10.33□□□□□ -0.76
CD33-206ENST00000600557 POTEHQ6S545 545 aa10.33□□□□□ -0.76
CD33-206ENST00000600557 SPDYE2BA6NHP3 402 aa10.3□□□□□ -0.76
CD33-206ENST00000600557 SPDYE6P0CI01 402 aa10.3□□□□□ -0.76
CD33-206ENST00000600557 SPDYE2Q495Y8 402 aa10.3□□□□□ -0.76
CD33-206ENST00000600557 REM2Q8IYK8 340 aaPredicted RBP10.27□□□□□ -0.77
CD33-206ENST00000600557 CHRDL2Q6WN34 429 aa10.26□□□□□ -0.77
CD33-206ENST00000600557 ZNF692Q9BU19 519 aaPredicted RBP10.22□□□□□ -0.77
CD33-206ENST00000600557 SSUH2Q9Y2M2 353 aa10.16□□□□□ -0.78
CD33-206ENST00000600557 PITPNM1O00562 1244 aa10.14□□□□□ -0.79
CD33-206ENST00000600557 SPDYE1Q8NFV5 336 aaPredicted RBP10.08□□□□□ -0.8
CD33-206ENST00000600557 PABPN1Q86U42 306 aaKnown RBP eCLIP10.06□□□□□ -0.8
CD33-206ENST00000600557 CLEC11AQ9Y240 323 aa10.06□□□□□ -0.8
CD33-206ENST00000600557 PIP4P2Q8N4L2 257 aa10.05□□□□□ -0.8
CD33-206ENST00000600557 FXR2P51116 673 aaKnown RBP eCLIP10.04□□□□□ -0.8
CD33-206ENST00000600557 SPDYE4A6NLX3 237 aa9.98□□□□□ -0.81
CD33-206ENST00000600557 PRR29P0C7W0 189 aa9.93□□□□□ -0.82
CD33-206ENST00000600557 PRKAR2AP13861 404 aaKnown RBP9.91□□□□□ -0.82
CD33-206ENST00000600557 STAG3Q9UJ98 1225 aa9.86□□□□□ -0.83
CD33-206ENST00000600557 HAX1O00165 279 aa9.85□□□□□ -0.83
CD33-206ENST00000600557 CHADLQ6NUI6 762 aa9.82□□□□□ -0.84
CD33-206ENST00000600557 SP7Q8TDD2 431 aaPredicted RBP9.77□□□□□ -0.85
CD33-206ENST00000600557 PROM2Q8N271 834 aa9.73□□□□□ -0.85
CD33-206ENST00000600557 C19orf67A6NJJ6 358 aa9.71□□□□□ -0.86
CD33-206ENST00000600557 FARP1Q9Y4F1 1045 aaPredicted RBP9.71□□□□□ -0.86
CD33-206ENST00000600557 EVX2Q03828 476 aa9.7□□□□□ -0.86
CD33-206ENST00000600557 CREBZFQ9NS37 354 aa9.69□□□□□ -0.86
CD33-206ENST00000600557 FKBP8Q14318 412 aa9.66□□□□□ -0.86
CD33-206ENST00000600557 CD44P16070 742 aaKnown RBP9.6□□□□□ -0.87
CD33-206ENST00000600557 NPM1P06748 294 aaKnown RBP eCLIP9.57□□□□□ -0.88
CD33-206ENST00000600557 GABBR2O75899 941 aa9.53□□□□□ -0.88
CD33-206ENST00000600557 PLEKHG5O94827 1062 aa9.53□□□□□ -0.88
CD33-206ENST00000600557 MNX1P50219 401 aaPredicted RBP9.53□□□□□ -0.88
CD33-206ENST00000600557 MIER1Q8N108 512 aa9.53□□□□□ -0.88
CD33-206ENST00000600557 ZRANB1Q9UGI0 708 aa9.51□□□□□ -0.89
CD33-206ENST00000600557 PAK3O75914 559 aaPredicted RBP9.49□□□□□ -0.89
CD33-206ENST00000600557 CLCN6P51797 869 aa9.49□□□□□ -0.89
CD33-206ENST00000600557 PLCD3Q8N3E9 789 aa9.47□□□□□ -0.89
CD33-206ENST00000600557 ZNF579Q8NAF0 562 aaKnown RBP9.45□□□□□ -0.9
CD33-206ENST00000600557 FBXO3Q9UK99 471 aa9.45□□□□□ -0.9
CD33-206ENST00000600557 ZBTB47Q9UFB7 747 aaPredicted RBP9.4□□□□□ -0.9
CD33-206ENST00000600557 TSPYL2Q9H2G4 693 aaPredicted RBP9.37□□□□□ -0.91
CD33-206ENST00000600557 PHF12Q96QT6 1004 aa9.35□□□□□ -0.91
CD33-206ENST00000600557 DCBLD2Q96PD2 775 aa9.33□□□□□ -0.92
CD33-206ENST00000600557 GALR2O43603 387 aaPredicted RBP9.31□□□□□ -0.92
CD33-206ENST00000600557 RASEFQ8IZ41 740 aa9.31□□□□□ -0.92
CD33-206ENST00000600557 CCDC61Q9Y6R9 512 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms