RNA–Protein interactions for RNA: ENST00000600415.1

LINC00608-204, long intergenic non-protein coding RNA 608, humanhuman

TSL 5

Gene LINC00608, Length 260 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00608-204ENST00000600415 AEBP2Q6ZN18 517 aaPredicted RBP21.71■■□□□ 1.07
LINC00608-204ENST00000600415 CHIC1Q5VXU3 224 aa20.32■□□□□ 0.84
LINC00608-204ENST00000600415 SENP3Q9H4L4 574 aaPredicted RBP18.65■□□□□ 0.58
LINC00608-204ENST00000600415 PHF23Q9BUL5 403 aaPredicted RBP18.28■□□□□ 0.52
LINC00608-204ENST00000600415 FOXD1Q16676 465 aa17.39■□□□□ 0.37
LINC00608-204ENST00000600415 POTEDQ86YR6 584 aa16.87■□□□□ 0.29
LINC00608-204ENST00000600415 MSH5O43196 834 aa16.51■□□□□ 0.23
LINC00608-204ENST00000600415 PIAS4Q8N2W9 510 aaPredicted RBP16.13■□□□□ 0.17
LINC00608-204ENST00000600415 PLPPR3Q6T4P5 718 aa15.92■□□□□ 0.14
LINC00608-204ENST00000600415 PPP6R1Q9UPN7 881 aa15.86■□□□□ 0.13
LINC00608-204ENST00000600415 ADRA2BP18089 450 aa15.77■□□□□ 0.12
LINC00608-204ENST00000600415 DMRT2Q9Y5R5 561 aa14.71□□□□□ -0.05
LINC00608-204ENST00000600415 MAPK8IP2Q13387 824 aaPredicted RBP14.61□□□□□ -0.07
LINC00608-204ENST00000600415 SCAF1Q9H7N4 1312 aaKnown RBP14.5□□□□□ -0.09
LINC00608-204ENST00000600415 CACNB1Q02641 598 aaPredicted RBP14.38□□□□□ -0.11
LINC00608-204ENST00000600415 RNF39Q9H2S5 420 aa14.04□□□□□ -0.16
LINC00608-204ENST00000600415 HOXD11P31277 338 aaPredicted RBP14.01□□□□□ -0.17
LINC00608-204ENST00000600415 DCAF8L1A6NGE4 600 aa14□□□□□ -0.17
LINC00608-204ENST00000600415 PPP4R3CPQ6ZMV5 832 aa13.86□□□□□ -0.19
LINC00608-204ENST00000600415 C1QBPQ07021 282 aaKnown RBP13.81□□□□□ -0.2
LINC00608-204ENST00000600415 RNF216Q9NWF9 866 aaPredicted RBP13.76□□□□□ -0.21
LINC00608-204ENST00000600415 CNKSR2Q8WXI2 1034 aa13.75□□□□□ -0.21
LINC00608-204ENST00000600415 DNAJC5BQ9UF47 199 aa13.7□□□□□ -0.22
LINC00608-204ENST00000600415 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.25□□□□□ -0.29
LINC00608-204ENST00000600415 NCBP3Q53F19 620 aaKnown RBP13.21□□□□□ -0.29
LINC00608-204ENST00000600415 POTEHQ6S545 545 aa13.13□□□□□ -0.31
LINC00608-204ENST00000600415 NPM3O75607 178 aaKnown RBP13□□□□□ -0.33
LINC00608-204ENST00000600415 U3KPZ7 1027 aaPredicted RBP12.97□□□□□ -0.33
LINC00608-204ENST00000600415 DSG3P32926 999 aa12.96□□□□□ -0.33
LINC00608-204ENST00000600415 SPINK5Q9NQ38 1064 aaPredicted RBP12.88□□□□□ -0.35
LINC00608-204ENST00000600415 CAPN15O75808 1086 aa12.87□□□□□ -0.35
LINC00608-204ENST00000600415 APLP2Q06481 763 aa12.6□□□□□ -0.39
LINC00608-204ENST00000600415 ZNF219Q9P2Y4 722 aaPredicted RBP12.58□□□□□ -0.4
LINC00608-204ENST00000600415 SLC4A2P04920 1241 aa12.54□□□□□ -0.4
LINC00608-204ENST00000600415 TRHP20396 242 aaPredicted RBP12.53□□□□□ -0.4
LINC00608-204ENST00000600415 ABCB7O75027 752 aa12.51□□□□□ -0.41
LINC00608-204ENST00000600415 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.47□□□□□ -0.41
LINC00608-204ENST00000600415 HNRNPUL2Q1KMD3 747 aaKnown RBP12.47□□□□□ -0.41
LINC00608-204ENST00000600415 RBM42Q9BTD8 480 aaKnown RBP12.42□□□□□ -0.42
LINC00608-204ENST00000600415 SAMD1Q6SPF0 538 aaPredicted RBP12.36□□□□□ -0.43
LINC00608-204ENST00000600415 KCNA4P22459 653 aa12.3□□□□□ -0.44
LINC00608-204ENST00000600415 CHRDL2Q6WN34 429 aa12.3□□□□□ -0.44
LINC00608-204ENST00000600415 POLA2Q14181 598 aa12.11□□□□□ -0.47
LINC00608-204ENST00000600415 SP7Q8TDD2 431 aaPredicted RBP12.1□□□□□ -0.47
LINC00608-204ENST00000600415 MYCNP04198 464 aaPredicted RBP12.06□□□□□ -0.48
LINC00608-204ENST00000600415 AKT1S1Q96B36 256 aa12.02□□□□□ -0.49
LINC00608-204ENST00000600415 ZBTB12Q9Y330 459 aaPredicted RBP11.91□□□□□ -0.5
LINC00608-204ENST00000600415 PIP4P2Q8N4L2 257 aa11.89□□□□□ -0.51
LINC00608-204ENST00000600415 REM2Q8IYK8 340 aaPredicted RBP11.87□□□□□ -0.51
LINC00608-204ENST00000600415 FXR2P51116 673 aaKnown RBP eCLIP11.77□□□□□ -0.53
LINC00608-204ENST00000600415 OSCARQ8IYS5 282 aa11.76□□□□□ -0.53
LINC00608-204ENST00000600415 ATF5Q9Y2D1 282 aaPredicted RBP11.76□□□□□ -0.53
LINC00608-204ENST00000600415 HAX1O00165 279 aa11.75□□□□□ -0.53
LINC00608-204ENST00000600415 PITPNM1O00562 1244 aa11.75□□□□□ -0.53
LINC00608-204ENST00000600415 FOXD4L1Q9NU39 408 aa11.67□□□□□ -0.54
LINC00608-204ENST00000600415 EVX2Q03828 476 aa11.58□□□□□ -0.56
LINC00608-204ENST00000600415 SLC4A1APQ9BWU0 796 aaKnown RBP11.53□□□□□ -0.56
LINC00608-204ENST00000600415 SPDYE2BA6NHP3 402 aa11.49□□□□□ -0.57
LINC00608-204ENST00000600415 SPDYE6P0CI01 402 aa11.49□□□□□ -0.57
LINC00608-204ENST00000600415 SPDYE2Q495Y8 402 aa11.49□□□□□ -0.57
LINC00608-204ENST00000600415 C19orf67A6NJJ6 358 aa11.42□□□□□ -0.58
LINC00608-204ENST00000600415 PRKAR2AP13861 404 aaKnown RBP11.42□□□□□ -0.58
LINC00608-204ENST00000600415 ATXN8OSP0DMR3 200 aa11.41□□□□□ -0.58
LINC00608-204ENST00000600415 SPDYE1Q8NFV5 336 aaPredicted RBP11.39□□□□□ -0.59
LINC00608-204ENST00000600415 FBLN2P98095 1184 aa11.37□□□□□ -0.59
LINC00608-204ENST00000600415 GABBR2O75899 941 aa11.33□□□□□ -0.6
LINC00608-204ENST00000600415 LHX8Q68G74 356 aa11.32□□□□□ -0.6
LINC00608-204ENST00000600415 ZBTB22O15209 634 aa11.31□□□□□ -0.6
LINC00608-204ENST00000600415 CLEC11AQ9Y240 323 aa11.31□□□□□ -0.6
LINC00608-204ENST00000600415 SSUH2Q9Y2M2 353 aa11.3□□□□□ -0.6
LINC00608-204ENST00000600415 MKRN4PQ13434 485 aaPredicted RBP11.22□□□□□ -0.61
LINC00608-204ENST00000600415 ZNF692Q9BU19 519 aaPredicted RBP11.21□□□□□ -0.61
LINC00608-204ENST00000600415 CHADLQ6NUI6 762 aa11.15□□□□□ -0.62
LINC00608-204ENST00000600415 PRR29P0C7W0 189 aa11.1□□□□□ -0.63
LINC00608-204ENST00000600415 CLCN6P51797 869 aa11.09□□□□□ -0.63
LINC00608-204ENST00000600415 POTEIP0CG38 1075 aa11.08□□□□□ -0.64
LINC00608-204ENST00000600415 CD44P16070 742 aaKnown RBP11.04□□□□□ -0.64
LINC00608-204ENST00000600415 PABPN1Q86U42 306 aaKnown RBP eCLIP11.04□□□□□ -0.64
LINC00608-204ENST00000600415 FARP1Q9Y4F1 1045 aaPredicted RBP11□□□□□ -0.65
LINC00608-204ENST00000600415 PLSCR2Q9NRY7 297 aa10.91□□□□□ -0.66
LINC00608-204ENST00000600415 ZNF579Q8NAF0 562 aaKnown RBP10.9□□□□□ -0.66
LINC00608-204ENST00000600415 DCBLD2Q96PD2 775 aa10.9□□□□□ -0.66
LINC00608-204ENST00000600415 ZRANB1Q9UGI0 708 aa10.79□□□□□ -0.68
LINC00608-204ENST00000600415 OTUD5Q96G74 571 aa10.77□□□□□ -0.69
LINC00608-204ENST00000600415 GALR2O43603 387 aaPredicted RBP10.74□□□□□ -0.69
LINC00608-204ENST00000600415 CREBZFQ9NS37 354 aa10.74□□□□□ -0.69
LINC00608-204ENST00000600415 POTEB2H3BUK9 544 aa10.69□□□□□ -0.7
LINC00608-204ENST00000600415 STAG3Q9UJ98 1225 aa10.69□□□□□ -0.7
LINC00608-204ENST00000600415 POTEMA6NI47 508 aa10.67□□□□□ -0.7
LINC00608-204ENST00000600415 POTEGQ6S5H5 508 aa10.63□□□□□ -0.71
LINC00608-204ENST00000600415 PAK3O75914 559 aaPredicted RBP10.62□□□□□ -0.71
LINC00608-204ENST00000600415 PHF12Q96QT6 1004 aa10.6□□□□□ -0.71
LINC00608-204ENST00000600415 PCDH10Q9P2E7 1040 aa10.6□□□□□ -0.71
LINC00608-204ENST00000600415 PELP1Q8IZL8 1130 aaKnown RBP10.57□□□□□ -0.72
LINC00608-204ENST00000600415 ASTLQ6HA08 431 aaPredicted RBP10.55□□□□□ -0.72
LINC00608-204ENST00000600415 NPM1P06748 294 aaKnown RBP eCLIP10.53□□□□□ -0.72
LINC00608-204ENST00000600415 MNX1P50219 401 aaPredicted RBP10.51□□□□□ -0.73
LINC00608-204ENST00000600415 METRNQ9UJH8 293 aa10.51□□□□□ -0.73
LINC00608-204ENST00000600415 C7P10643 843 aa10.5□□□□□ -0.73
LINC00608-204ENST00000600415 SLC39A7Q92504 469 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms