RNA–Protein interactions for RNA: ENST00000599959.5

LINC01125-222, human

TSL 5

Gene LINC01125, Length 742 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01125-222	ENST00000599959	AEBP2	Q6ZN18	517 aa	Predicted RBP	22.45	■■□□□ 1.18
LINC01125-222	ENST00000599959	CHIC1	Q5VXU3	224 aa		21.59	■■□□□ 1.05
LINC01125-222	ENST00000599959	SENP3	Q9H4L4	574 aa	Predicted RBP	19.13	■□□□□ 0.65
LINC01125-222	ENST00000599959	PHF23	Q9BUL5	403 aa	Predicted RBP	18.94	■□□□□ 0.62
LINC01125-222	ENST00000599959	FOXD1	Q16676	465 aa		17.78	■□□□□ 0.44
LINC01125-222	ENST00000599959	PLPPR3	Q6T4P5	718 aa		17.38	■□□□□ 0.37
LINC01125-222	ENST00000599959	PPP6R1	Q9UPN7	881 aa		16.82	■□□□□ 0.28
LINC01125-222	ENST00000599959	ADRA2B	P18089	450 aa		16.78	■□□□□ 0.28
LINC01125-222	ENST00000599959	PIAS4	Q8N2W9	510 aa	Predicted RBP	16.68	■□□□□ 0.26
LINC01125-222	ENST00000599959	MSH5	O43196	834 aa		16.57	■□□□□ 0.24
LINC01125-222	ENST00000599959	POTED	Q86YR6	584 aa		15.69	■□□□□ 0.1
LINC01125-222	ENST00000599959	SCAF1	Q9H7N4	1312 aa	Known RBP	15.39	■□□□□ 0.05
LINC01125-222	ENST00000599959	MAPK8IP2	Q13387	824 aa	Predicted RBP	15.32	■□□□□ 0.04
LINC01125-222	ENST00000599959	PPP4R3CP	Q6ZMV5	832 aa		15.26	■□□□□ 0.03
LINC01125-222	ENST00000599959	DMRT2	Q9Y5R5	561 aa		15.21	■□□□□ 0.03
LINC01125-222	ENST00000599959	CNKSR2	Q8WXI2	1034 aa		14.92	□□□□□ -0.02
LINC01125-222	ENST00000599959	HOXD11	P31277	338 aa	Predicted RBP	14.76	□□□□□ -0.05
LINC01125-222	ENST00000599959	NCBP3	Q53F19	620 aa	Known RBP	14.76	□□□□□ -0.05
LINC01125-222	ENST00000599959	RNF216	Q9NWF9	866 aa	Predicted RBP	14.73	□□□□□ -0.05
LINC01125-222	ENST00000599959	DCAF8L1	A6NGE4	600 aa		14.54	□□□□□ -0.08
LINC01125-222	ENST00000599959	NPM3	O75607	178 aa	Known RBP	14.53	□□□□□ -0.08
LINC01125-222	ENST00000599959	KCNA4	P22459	653 aa		14.48	□□□□□ -0.09
LINC01125-222	ENST00000599959	DNAJC5B	Q9UF47	199 aa		14.23	□□□□□ -0.13
LINC01125-222	ENST00000599959	RNF39	Q9H2S5	420 aa		14.15	□□□□□ -0.14
LINC01125-222	ENST00000599959	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	14.04	□□□□□ -0.16
LINC01125-222	ENST00000599959	CACNB1	Q02641	598 aa	Predicted RBP	14.03	□□□□□ -0.16
LINC01125-222	ENST00000599959	C1QBP	Q07021	282 aa	Known RBP	13.97	□□□□□ -0.17
LINC01125-222	ENST00000599959	SLC4A2	P04920	1241 aa		13.81	□□□□□ -0.2
LINC01125-222	ENST00000599959		U3KPZ7	1027 aa	Predicted RBP	13.78	□□□□□ -0.2
LINC01125-222	ENST00000599959	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.73	□□□□□ -0.21
LINC01125-222	ENST00000599959	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.51	□□□□□ -0.25
LINC01125-222	ENST00000599959	HNRNPUL2	Q1KMD3	747 aa	Known RBP	13.51	□□□□□ -0.25
LINC01125-222	ENST00000599959	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.49	□□□□□ -0.25
LINC01125-222	ENST00000599959	CAPN15	O75808	1086 aa		13.46	□□□□□ -0.25
LINC01125-222	ENST00000599959	APLP2	Q06481	763 aa		13.46	□□□□□ -0.25
LINC01125-222	ENST00000599959	FOXD4L1	Q9NU39	408 aa		13.46	□□□□□ -0.25
LINC01125-222	ENST00000599959	MYCN	P04198	464 aa	Predicted RBP	13.45	□□□□□ -0.26
LINC01125-222	ENST00000599959	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.44	□□□□□ -0.26
LINC01125-222	ENST00000599959	DSG3	P32926	999 aa		13.34	□□□□□ -0.27
LINC01125-222	ENST00000599959	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.32	□□□□□ -0.28
LINC01125-222	ENST00000599959	ZBTB22	O15209	634 aa		13.31	□□□□□ -0.28
LINC01125-222	ENST00000599959	TRH	P20396	242 aa	Predicted RBP	13.3	□□□□□ -0.28
LINC01125-222	ENST00000599959	ABCB7	O75027	752 aa		13.16	□□□□□ -0.3
LINC01125-222	ENST00000599959	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.09	□□□□□ -0.31
LINC01125-222	ENST00000599959	ATXN8OS	P0DMR3	200 aa		13.03	□□□□□ -0.32
LINC01125-222	ENST00000599959	POLA2	Q14181	598 aa		13.02	□□□□□ -0.33
LINC01125-222	ENST00000599959	CSRNP3	Q8WYN3	585 aa		12.95	□□□□□ -0.34
LINC01125-222	ENST00000599959	EHMT2	Q96KQ7	1210 aa		12.9	□□□□□ -0.34
LINC01125-222	ENST00000599959	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.8	□□□□□ -0.36
LINC01125-222	ENST00000599959	RBM42	Q9BTD8	480 aa	Known RBP	12.74	□□□□□ -0.37
LINC01125-222	ENST00000599959	FBLN2	P98095	1184 aa		12.59	□□□□□ -0.39
LINC01125-222	ENST00000599959	OSCAR	Q8IYS5	282 aa		12.59	□□□□□ -0.39
LINC01125-222	ENST00000599959	MKRN4P	Q13434	485 aa	Predicted RBP	12.51	□□□□□ -0.41
LINC01125-222	ENST00000599959	AKT1S1	Q96B36	256 aa		12.49	□□□□□ -0.41
LINC01125-222	ENST00000599959	SPDYE2B	A6NHP3	402 aa		12.42	□□□□□ -0.42
LINC01125-222	ENST00000599959	SPDYE6	P0CI01	402 aa		12.42	□□□□□ -0.42
LINC01125-222	ENST00000599959	SPDYE2	Q495Y8	402 aa		12.42	□□□□□ -0.42
LINC01125-222	ENST00000599959	POTEH	Q6S545	545 aa		12.36	□□□□□ -0.43
LINC01125-222	ENST00000599959	REM2	Q8IYK8	340 aa	Predicted RBP	12.36	□□□□□ -0.43
LINC01125-222	ENST00000599959	CHRDL2	Q6WN34	429 aa		12.33	□□□□□ -0.44
LINC01125-222	ENST00000599959	ZNF692	Q9BU19	519 aa	Predicted RBP	12.3	□□□□□ -0.44
LINC01125-222	ENST00000599959	SSUH2	Q9Y2M2	353 aa		12.29	□□□□□ -0.44
LINC01125-222	ENST00000599959	PITPNM1	O00562	1244 aa		12.22	□□□□□ -0.45
LINC01125-222	ENST00000599959	SPDYE1	Q8NFV5	336 aa	Predicted RBP	12.14	□□□□□ -0.47
LINC01125-222	ENST00000599959	PABPN1	Q86U42	306 aa	Known RBP eCLIP	12.13	□□□□□ -0.47
LINC01125-222	ENST00000599959	PIP4P2	Q8N4L2	257 aa		12.09	□□□□□ -0.47
LINC01125-222	ENST00000599959	FXR2	P51116	673 aa	Known RBP eCLIP	12.08	□□□□□ -0.48
LINC01125-222	ENST00000599959	CLEC11A	Q9Y240	323 aa		12.08	□□□□□ -0.48
LINC01125-222	ENST00000599959	SPDYE4	A6NLX3	237 aa		12.07	□□□□□ -0.48
LINC01125-222	ENST00000599959	PRR29	P0C7W0	189 aa		11.93	□□□□□ -0.5
LINC01125-222	ENST00000599959	PRKAR2A	P13861	404 aa	Known RBP	11.91	□□□□□ -0.5
LINC01125-222	ENST00000599959	STAG3	Q9UJ98	1225 aa		11.87	□□□□□ -0.51
LINC01125-222	ENST00000599959	PROM2	Q8N271	834 aa		11.83	□□□□□ -0.52
LINC01125-222	ENST00000599959	CHADL	Q6NUI6	762 aa		11.81	□□□□□ -0.52
LINC01125-222	ENST00000599959	HAX1	O00165	279 aa		11.8	□□□□□ -0.52
LINC01125-222	ENST00000599959	FKBP8	Q14318	412 aa		11.72	□□□□□ -0.53
LINC01125-222	ENST00000599959	SP7	Q8TDD2	431 aa	Predicted RBP	11.71	□□□□□ -0.53
LINC01125-222	ENST00000599959	CREBZF	Q9NS37	354 aa		11.69	□□□□□ -0.54
LINC01125-222	ENST00000599959	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.69	□□□□□ -0.54
LINC01125-222	ENST00000599959	C19orf67	A6NJJ6	358 aa		11.68	□□□□□ -0.54
LINC01125-222	ENST00000599959	EVX2	Q03828	476 aa		11.66	□□□□□ -0.54
LINC01125-222	ENST00000599959	CD44	P16070	742 aa	Known RBP	11.55	□□□□□ -0.56
LINC01125-222	ENST00000599959	MNX1	P50219	401 aa	Predicted RBP	11.53	□□□□□ -0.56
LINC01125-222	ENST00000599959	NPM1	P06748	294 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
LINC01125-222	ENST00000599959	MIER1	Q8N108	512 aa		11.47	□□□□□ -0.57
LINC01125-222	ENST00000599959	PLEKHG5	O94827	1062 aa		11.46	□□□□□ -0.57
LINC01125-222	ENST00000599959	GABBR2	O75899	941 aa		11.43	□□□□□ -0.58
LINC01125-222	ENST00000599959	ZRANB1	Q9UGI0	708 aa		11.43	□□□□□ -0.58
LINC01125-222	ENST00000599959	FBXO3	Q9UK99	471 aa		11.43	□□□□□ -0.58
LINC01125-222	ENST00000599959	PLCD3	Q8N3E9	789 aa		11.42	□□□□□ -0.58
LINC01125-222	ENST00000599959	PAK3	O75914	559 aa	Predicted RBP	11.4	□□□□□ -0.58
LINC01125-222	ENST00000599959	ZNF579	Q8NAF0	562 aa	Known RBP	11.4	□□□□□ -0.58
LINC01125-222	ENST00000599959	CLCN6	P51797	869 aa		11.39	□□□□□ -0.59
LINC01125-222	ENST00000599959	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.34	□□□□□ -0.59
LINC01125-222	ENST00000599959	PHF12	Q96QT6	1004 aa		11.28	□□□□□ -0.6
LINC01125-222	ENST00000599959	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.28	□□□□□ -0.6
LINC01125-222	ENST00000599959	VASP	P50552	380 aa	Predicted RBP	11.27	□□□□□ -0.61
LINC01125-222	ENST00000599959	RASEF	Q8IZ41	740 aa		11.25	□□□□□ -0.61
LINC01125-222	ENST00000599959	CCDC61	Q9Y6R9	512 aa		11.24	□□□□□ -0.61
LINC01125-222	ENST00000599959	NUBP1	P53384	320 aa		11.23	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms