RNA–Protein interactions for RNA: ENST00000598867.1

SOX2-OT-230, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 348 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-230ENST00000598867 CHIC1Q5VXU3 224 aa18.21■□□□□ 0.51
SOX2-OT-230ENST00000598867 AEBP2Q6ZN18 517 aaPredicted RBP18.04■□□□□ 0.48
SOX2-OT-230ENST00000598867 PHF23Q9BUL5 403 aaPredicted RBP16.15■□□□□ 0.18
SOX2-OT-230ENST00000598867 PLPPR3Q6T4P5 718 aa15.12■□□□□ 0.01
SOX2-OT-230ENST00000598867 SENP3Q9H4L4 574 aaPredicted RBP15.07■□□□□ 0
SOX2-OT-230ENST00000598867 ADRA2BP18089 450 aa14.17□□□□□ -0.14
SOX2-OT-230ENST00000598867 EHMT2Q96KQ7 1210 aa14.07□□□□□ -0.16
SOX2-OT-230ENST00000598867 KCNA4P22459 653 aa14.05□□□□□ -0.16
SOX2-OT-230ENST00000598867 PPP6R1Q9UPN7 881 aa14□□□□□ -0.17
SOX2-OT-230ENST00000598867 FOXD1Q16676 465 aa13.97□□□□□ -0.17
SOX2-OT-230ENST00000598867 CSRNP3Q8WYN3 585 aa13.53□□□□□ -0.24
SOX2-OT-230ENST00000598867 SLC4A1APQ9BWU0 796 aaKnown RBP13.51□□□□□ -0.25
SOX2-OT-230ENST00000598867 PPP4R3CPQ6ZMV5 832 aa13.43□□□□□ -0.26
SOX2-OT-230ENST00000598867 NCBP3Q53F19 620 aaKnown RBP13.28□□□□□ -0.28
SOX2-OT-230ENST00000598867 PIAS4Q8N2W9 510 aaPredicted RBP13.26□□□□□ -0.29
SOX2-OT-230ENST00000598867 NPM3O75607 178 aaKnown RBP13.13□□□□□ -0.31
SOX2-OT-230ENST00000598867 ZBTB22O15209 634 aa12.97□□□□□ -0.33
SOX2-OT-230ENST00000598867 CNKSR2Q8WXI2 1034 aa12.86□□□□□ -0.35
SOX2-OT-230ENST00000598867 SCAF1Q9H7N4 1312 aaKnown RBP12.73□□□□□ -0.37
SOX2-OT-230ENST00000598867 POTEDQ86YR6 584 aa12.72□□□□□ -0.37
SOX2-OT-230ENST00000598867 FOXD4L1Q9NU39 408 aa12.68□□□□□ -0.38
SOX2-OT-230ENST00000598867 DNAJC5BQ9UF47 199 aa12.66□□□□□ -0.38
SOX2-OT-230ENST00000598867 SLC24A1O60721 1099 aa12.59□□□□□ -0.39
SOX2-OT-230ENST00000598867 MSH5O43196 834 aa12.53□□□□□ -0.4
SOX2-OT-230ENST00000598867 RTN4Q9NQC3 1192 aaKnown RBP12.52□□□□□ -0.41
SOX2-OT-230ENST00000598867 MAPK8IP2Q13387 824 aaPredicted RBP12.48□□□□□ -0.41
SOX2-OT-230ENST00000598867 AMER1Q5JTC6 1135 aaPredicted RBP12.48□□□□□ -0.41
SOX2-OT-230ENST00000598867 RNF216Q9NWF9 866 aaPredicted RBP12.42□□□□□ -0.42
SOX2-OT-230ENST00000598867 HOXD11P31277 338 aaPredicted RBP12.23□□□□□ -0.45
SOX2-OT-230ENST00000598867 SLC4A2P04920 1241 aa12.21□□□□□ -0.45
SOX2-OT-230ENST00000598867 DMRT2Q9Y5R5 561 aa12.2□□□□□ -0.46
SOX2-OT-230ENST00000598867 FKBP8Q14318 412 aa12.17□□□□□ -0.46
SOX2-OT-230ENST00000598867 ATXN8OSP0DMR3 200 aa12.15□□□□□ -0.46
SOX2-OT-230ENST00000598867 MYCNP04198 464 aaPredicted RBP12.09□□□□□ -0.47
SOX2-OT-230ENST00000598867 ATF5Q9Y2D1 282 aaPredicted RBP11.76□□□□□ -0.53
SOX2-OT-230ENST00000598867 SAMD1Q6SPF0 538 aaPredicted RBP11.6□□□□□ -0.55
SOX2-OT-230ENST00000598867 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.59□□□□□ -0.55
SOX2-OT-230ENST00000598867 HNRNPUL2Q1KMD3 747 aaKnown RBP11.59□□□□□ -0.55
SOX2-OT-230ENST00000598867 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.59□□□□□ -0.55
SOX2-OT-230ENST00000598867 DCAF8L1A6NGE4 600 aa11.54□□□□□ -0.56
SOX2-OT-230ENST00000598867 U3KPZ7 1027 aaPredicted RBP11.53□□□□□ -0.56
SOX2-OT-230ENST00000598867 PLCB2Q00722 1185 aa11.5□□□□□ -0.57
SOX2-OT-230ENST00000598867 FBXO3Q9UK99 471 aa11.48□□□□□ -0.57
SOX2-OT-230ENST00000598867 ZNF219Q9P2Y4 722 aaPredicted RBP11.44□□□□□ -0.58
SOX2-OT-230ENST00000598867 SPDYE4A6NLX3 237 aa11.39□□□□□ -0.59
SOX2-OT-230ENST00000598867 HAP1P54257 671 aaPredicted RBP11.34□□□□□ -0.59
SOX2-OT-230ENST00000598867 VASPP50552 380 aaPredicted RBP11.33□□□□□ -0.6
SOX2-OT-230ENST00000598867 PROM2Q8N271 834 aa11.32□□□□□ -0.6
SOX2-OT-230ENST00000598867 MKRN4PQ13434 485 aaPredicted RBP11.28□□□□□ -0.6
SOX2-OT-230ENST00000598867 DCAF8L2P0C7V8 631 aa11.27□□□□□ -0.61
SOX2-OT-230ENST00000598867 APLP2Q06481 763 aa11.26□□□□□ -0.61
SOX2-OT-230ENST00000598867 IFNLR1Q8IU57 520 aaPredicted RBP11.26□□□□□ -0.61
SOX2-OT-230ENST00000598867 BCANQ96GW7 911 aa11.24□□□□□ -0.61
SOX2-OT-230ENST00000598867 PKD2Q13563 968 aa11.19□□□□□ -0.62
SOX2-OT-230ENST00000598867 PRKCSHP14314 528 aaPredicted RBP11.17□□□□□ -0.62
SOX2-OT-230ENST00000598867 VSIG10Q8N0Z9 540 aa11.16□□□□□ -0.62
SOX2-OT-230ENST00000598867 FBLN2P98095 1184 aa11.15□□□□□ -0.62
SOX2-OT-230ENST00000598867 TAOK2Q9UL54 1235 aa11.13□□□□□ -0.63
SOX2-OT-230ENST00000598867 TRHP20396 242 aaPredicted RBP11.01□□□□□ -0.65
SOX2-OT-230ENST00000598867 POLA2Q14181 598 aa11.01□□□□□ -0.65
SOX2-OT-230ENST00000598867 BBXQ8WY36 941 aaPredicted RBP11.01□□□□□ -0.65
SOX2-OT-230ENST00000598867 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.01□□□□□ -0.65
SOX2-OT-230ENST00000598867 KDM2AQ9Y2K7 1162 aa11.01□□□□□ -0.65
SOX2-OT-230ENST00000598867 SPINK5Q9NQ38 1064 aaPredicted RBP10.99□□□□□ -0.65
SOX2-OT-230ENST00000598867 NPM1P06748 294 aaKnown RBP eCLIP10.96□□□□□ -0.65
SOX2-OT-230ENST00000598867 PAXIP1Q6ZW49 1069 aaPredicted RBP10.96□□□□□ -0.65
SOX2-OT-230ENST00000598867 SPOCK2Q92563 424 aa10.96□□□□□ -0.65
SOX2-OT-230ENST00000598867 ECM2O94769 699 aaPredicted RBP10.95□□□□□ -0.66
SOX2-OT-230ENST00000598867 TPRNQ4KMQ1 711 aa10.95□□□□□ -0.66
SOX2-OT-230ENST00000598867 KLHL34Q8N239 644 aa10.94□□□□□ -0.66
SOX2-OT-230ENST00000598867 CFAP44Q96MT7 982 aa10.93□□□□□ -0.66
SOX2-OT-230ENST00000598867 RNF39Q9H2S5 420 aa10.88□□□□□ -0.67
SOX2-OT-230ENST00000598867 RGL2O15211 777 aa10.85□□□□□ -0.67
SOX2-OT-230ENST00000598867 CAPN15O75808 1086 aa10.85□□□□□ -0.67
SOX2-OT-230ENST00000598867 ZBTB12Q9Y330 459 aaPredicted RBP10.85□□□□□ -0.67
SOX2-OT-230ENST00000598867 SPRYD3Q8NCJ5 442 aa10.82□□□□□ -0.68
SOX2-OT-230ENST00000598867 TSHZ2Q9NRE2 1034 aa10.81□□□□□ -0.68
SOX2-OT-230ENST00000598867 STAG3Q9UJ98 1225 aa10.8□□□□□ -0.68
SOX2-OT-230ENST00000598867 CACNB1Q02641 598 aaPredicted RBP10.79□□□□□ -0.68
SOX2-OT-230ENST00000598867 PLCD3Q8N3E9 789 aa10.78□□□□□ -0.68
SOX2-OT-230ENST00000598867 ABCB7O75027 752 aa10.74□□□□□ -0.69
SOX2-OT-230ENST00000598867 C1QBPQ07021 282 aaKnown RBP10.73□□□□□ -0.69
SOX2-OT-230ENST00000598867 ZNF692Q9BU19 519 aaPredicted RBP10.73□□□□□ -0.69
SOX2-OT-230ENST00000598867 CHGAP10645 457 aaKnown RBP10.71□□□□□ -0.69
SOX2-OT-230ENST00000598867 MIER1Q8N108 512 aa10.69□□□□□ -0.7
SOX2-OT-230ENST00000598867 DNAJC5Q9H3Z4 198 aa10.66□□□□□ -0.7
SOX2-OT-230ENST00000598867 CIZ1Q9ULV3 898 aaPredicted RBP10.66□□□□□ -0.7
SOX2-OT-230ENST00000598867 SSUH2Q9Y2M2 353 aa10.66□□□□□ -0.7
SOX2-OT-230ENST00000598867 SPDYE2BA6NHP3 402 aa10.64□□□□□ -0.71
SOX2-OT-230ENST00000598867 SPDYE6P0CI01 402 aa10.64□□□□□ -0.71
SOX2-OT-230ENST00000598867 NBR1Q14596 966 aa10.64□□□□□ -0.71
SOX2-OT-230ENST00000598867 SPDYE2Q495Y8 402 aa10.64□□□□□ -0.71
SOX2-OT-230ENST00000598867 PABPN1Q86U42 306 aaKnown RBP eCLIP10.63□□□□□ -0.71
SOX2-OT-230ENST00000598867 OSCARQ8IYS5 282 aa10.62□□□□□ -0.71
SOX2-OT-230ENST00000598867 HS6ST3Q8IZP7 471 aa10.59□□□□□ -0.71
SOX2-OT-230ENST00000598867 ZBTB47Q9UFB7 747 aaPredicted RBP10.58□□□□□ -0.72
SOX2-OT-230ENST00000598867 DSG3P32926 999 aa10.57□□□□□ -0.72
SOX2-OT-230ENST00000598867 PLEKHG5O94827 1062 aa10.56□□□□□ -0.72
SOX2-OT-230ENST00000598867 TRIM41Q8WV44 630 aa10.56□□□□□ -0.72
SOX2-OT-230ENST00000598867 RNF25Q96BH1 459 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms