RNA–Protein interactions for RNA: ENST00000597477.5

PIK3C3-216, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 2

Gene PIK3C3, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-216ENST00000597477 AEBP2Q6ZN18 517 aaPredicted RBP28.29■■■□□ 2.12
PIK3C3-216ENST00000597477 CHIC1Q5VXU3 224 aa26.46■■□□□ 1.83
PIK3C3-216ENST00000597477 SENP3Q9H4L4 574 aaPredicted RBP23.97■■□□□ 1.43
PIK3C3-216ENST00000597477 PHF23Q9BUL5 403 aaPredicted RBP23.67■■□□□ 1.38
PIK3C3-216ENST00000597477 FOXD1Q16676 465 aa22.5■■□□□ 1.19
PIK3C3-216ENST00000597477 POTEDQ86YR6 584 aa21.17■□□□□ 0.98
PIK3C3-216ENST00000597477 MSH5O43196 834 aa21.02■□□□□ 0.96
PIK3C3-216ENST00000597477 PLPPR3Q6T4P5 718 aa20.89■□□□□ 0.93
PIK3C3-216ENST00000597477 PPP6R1Q9UPN7 881 aa20.87■□□□□ 0.93
PIK3C3-216ENST00000597477 PIAS4Q8N2W9 510 aaPredicted RBP20.84■□□□□ 0.93
PIK3C3-216ENST00000597477 ADRA2BP18089 450 aa20.7■□□□□ 0.9
PIK3C3-216ENST00000597477 MAPK8IP2Q13387 824 aaPredicted RBP19.14■□□□□ 0.65
PIK3C3-216ENST00000597477 DMRT2Q9Y5R5 561 aa19.03■□□□□ 0.64
PIK3C3-216ENST00000597477 SCAF1Q9H7N4 1312 aaKnown RBP18.71■□□□□ 0.59
PIK3C3-216ENST00000597477 PPP4R3CPQ6ZMV5 832 aa18.32■□□□□ 0.52
PIK3C3-216ENST00000597477 HOXD11P31277 338 aaPredicted RBP18.24■□□□□ 0.51
PIK3C3-216ENST00000597477 CACNB1Q02641 598 aaPredicted RBP18.19■□□□□ 0.5
PIK3C3-216ENST00000597477 DCAF8L1A6NGE4 600 aa18.07■□□□□ 0.48
PIK3C3-216ENST00000597477 RNF39Q9H2S5 420 aa18.02■□□□□ 0.48
PIK3C3-216ENST00000597477 CNKSR2Q8WXI2 1034 aa18.01■□□□□ 0.47
PIK3C3-216ENST00000597477 RNF216Q9NWF9 866 aaPredicted RBP17.96■□□□□ 0.47
PIK3C3-216ENST00000597477 C1QBPQ07021 282 aaKnown RBP17.65■□□□□ 0.42
PIK3C3-216ENST00000597477 DNAJC5BQ9UF47 199 aa17.63■□□□□ 0.41
PIK3C3-216ENST00000597477 NCBP3Q53F19 620 aaKnown RBP17.37■□□□□ 0.37
PIK3C3-216ENST00000597477 NPM3O75607 178 aaKnown RBP17.33■□□□□ 0.36
PIK3C3-216ENST00000597477 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.2■□□□□ 0.34
PIK3C3-216ENST00000597477 U3KPZ7 1027 aaPredicted RBP16.99■□□□□ 0.31
PIK3C3-216ENST00000597477 SPINK5Q9NQ38 1064 aaPredicted RBP16.83■□□□□ 0.28
PIK3C3-216ENST00000597477 DSG3P32926 999 aa16.77■□□□□ 0.28
PIK3C3-216ENST00000597477 KCNA4P22459 653 aa16.74■□□□□ 0.27
PIK3C3-216ENST00000597477 SLC4A2P04920 1241 aa16.7■□□□□ 0.26
PIK3C3-216ENST00000597477 CAPN15O75808 1086 aa16.65■□□□□ 0.26
PIK3C3-216ENST00000597477 POTEHQ6S545 545 aa16.47■□□□□ 0.23
PIK3C3-216ENST00000597477 ABCB7O75027 752 aa16.32■□□□□ 0.2
PIK3C3-216ENST00000597477 TRHP20396 242 aaPredicted RBP16.32■□□□□ 0.2
PIK3C3-216ENST00000597477 ZNF219Q9P2Y4 722 aaPredicted RBP16.27■□□□□ 0.2
PIK3C3-216ENST00000597477 APLP2Q06481 763 aa16.19■□□□□ 0.18
PIK3C3-216ENST00000597477 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.17■□□□□ 0.18
PIK3C3-216ENST00000597477 HNRNPUL2Q1KMD3 747 aaKnown RBP16.17■□□□□ 0.18
PIK3C3-216ENST00000597477 SAMD1Q6SPF0 538 aaPredicted RBP16.12■□□□□ 0.17
PIK3C3-216ENST00000597477 MYCNP04198 464 aaPredicted RBP15.94■□□□□ 0.14
PIK3C3-216ENST00000597477 POLA2Q14181 598 aa15.86■□□□□ 0.13
PIK3C3-216ENST00000597477 RBM42Q9BTD8 480 aaKnown RBP15.84■□□□□ 0.13
PIK3C3-216ENST00000597477 ATF5Q9Y2D1 282 aaPredicted RBP15.77■□□□□ 0.12
PIK3C3-216ENST00000597477 CHRDL2Q6WN34 429 aa15.72■□□□□ 0.11
PIK3C3-216ENST00000597477 FOXD4L1Q9NU39 408 aa15.63■□□□□ 0.09
PIK3C3-216ENST00000597477 SLC4A1APQ9BWU0 796 aaKnown RBP15.62■□□□□ 0.09
PIK3C3-216ENST00000597477 ZBTB22O15209 634 aa15.5■□□□□ 0.07
PIK3C3-216ENST00000597477 AKT1S1Q96B36 256 aa15.48■□□□□ 0.07
PIK3C3-216ENST00000597477 OSCARQ8IYS5 282 aa15.43■□□□□ 0.06
PIK3C3-216ENST00000597477 ZBTB12Q9Y330 459 aaPredicted RBP15.41■□□□□ 0.06
PIK3C3-216ENST00000597477 REM2Q8IYK8 340 aaPredicted RBP15.39■□□□□ 0.05
PIK3C3-216ENST00000597477 PIP4P2Q8N4L2 257 aa15.33■□□□□ 0.04
PIK3C3-216ENST00000597477 SP7Q8TDD2 431 aaPredicted RBP15.29■□□□□ 0.04
PIK3C3-216ENST00000597477 PITPNM1O00562 1244 aa15.26■□□□□ 0.03
PIK3C3-216ENST00000597477 FXR2P51116 673 aaKnown RBP eCLIP15.2■□□□□ 0.02
PIK3C3-216ENST00000597477 ATXN8OSP0DMR3 200 aa15.15■□□□□ 0.02
PIK3C3-216ENST00000597477 EVX2Q03828 476 aa15.02■□□□□ -0
PIK3C3-216ENST00000597477 MKRN4PQ13434 485 aaPredicted RBP15.02■□□□□ -0
PIK3C3-216ENST00000597477 SPDYE2BA6NHP3 402 aa14.99□□□□□ -0.01
PIK3C3-216ENST00000597477 HAX1O00165 279 aa14.99□□□□□ -0.01
PIK3C3-216ENST00000597477 SPDYE6P0CI01 402 aa14.99□□□□□ -0.01
PIK3C3-216ENST00000597477 SPDYE2Q495Y8 402 aa14.99□□□□□ -0.01
PIK3C3-216ENST00000597477 FBLN2P98095 1184 aa14.89□□□□□ -0.03
PIK3C3-216ENST00000597477 SSUH2Q9Y2M2 353 aa14.87□□□□□ -0.03
PIK3C3-216ENST00000597477 PRKAR2AP13861 404 aaKnown RBP14.79□□□□□ -0.04
PIK3C3-216ENST00000597477 SPDYE1Q8NFV5 336 aaPredicted RBP14.76□□□□□ -0.05
PIK3C3-216ENST00000597477 CLEC11AQ9Y240 323 aa14.73□□□□□ -0.05
PIK3C3-216ENST00000597477 C19orf67A6NJJ6 358 aa14.72□□□□□ -0.05
PIK3C3-216ENST00000597477 ZNF692Q9BU19 519 aaPredicted RBP14.72□□□□□ -0.05
PIK3C3-216ENST00000597477 CHADLQ6NUI6 762 aa14.61□□□□□ -0.07
PIK3C3-216ENST00000597477 GABBR2O75899 941 aa14.55□□□□□ -0.08
PIK3C3-216ENST00000597477 PABPN1Q86U42 306 aaKnown RBP eCLIP14.55□□□□□ -0.08
PIK3C3-216ENST00000597477 PRR29P0C7W0 189 aa14.45□□□□□ -0.1
PIK3C3-216ENST00000597477 CSRNP3Q8WYN3 585 aa14.42□□□□□ -0.1
PIK3C3-216ENST00000597477 POTEIP0CG38 1075 aa14.36□□□□□ -0.11
PIK3C3-216ENST00000597477 FARP1Q9Y4F1 1045 aaPredicted RBP14.33□□□□□ -0.12
PIK3C3-216ENST00000597477 LHX8Q68G74 356 aa14.31□□□□□ -0.12
PIK3C3-216ENST00000597477 CD44P16070 742 aaKnown RBP14.29□□□□□ -0.12
PIK3C3-216ENST00000597477 CREBZFQ9NS37 354 aa14.18□□□□□ -0.14
PIK3C3-216ENST00000597477 ZNF579Q8NAF0 562 aaKnown RBP14.12□□□□□ -0.15
PIK3C3-216ENST00000597477 CLCN6P51797 869 aa14.07□□□□□ -0.16
PIK3C3-216ENST00000597477 ZRANB1Q9UGI0 708 aa14.02□□□□□ -0.17
PIK3C3-216ENST00000597477 GALR2O43603 387 aaPredicted RBP14□□□□□ -0.17
PIK3C3-216ENST00000597477 SPDYE4A6NLX3 237 aa13.99□□□□□ -0.17
PIK3C3-216ENST00000597477 MNX1P50219 401 aaPredicted RBP13.98□□□□□ -0.17
PIK3C3-216ENST00000597477 STAG3Q9UJ98 1225 aa13.98□□□□□ -0.17
PIK3C3-216ENST00000597477 EHMT2Q96KQ7 1210 aa13.94□□□□□ -0.18
PIK3C3-216ENST00000597477 DCBLD2Q96PD2 775 aa13.94□□□□□ -0.18
PIK3C3-216ENST00000597477 PHF12Q96QT6 1004 aa13.89□□□□□ -0.19
PIK3C3-216ENST00000597477 POTEB2H3BUK9 544 aa13.88□□□□□ -0.19
PIK3C3-216ENST00000597477 OTUD5Q96G74 571 aa13.83□□□□□ -0.2
PIK3C3-216ENST00000597477 PELP1Q8IZL8 1130 aaKnown RBP13.81□□□□□ -0.2
PIK3C3-216ENST00000597477 PROM2Q8N271 834 aa13.79□□□□□ -0.2
PIK3C3-216ENST00000597477 PAK3O75914 559 aaPredicted RBP13.71□□□□□ -0.21
PIK3C3-216ENST00000597477 NPM1P06748 294 aaKnown RBP eCLIP13.7□□□□□ -0.22
PIK3C3-216ENST00000597477 MS4A3Q96HJ5 214 aa13.7□□□□□ -0.22
PIK3C3-216ENST00000597477 ASTLQ6HA08 431 aaPredicted RBP13.68□□□□□ -0.22
PIK3C3-216ENST00000597477 POTEJP0CG39 1038 aa13.66□□□□□ -0.22
PIK3C3-216ENST00000597477 ATMINO43313 823 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms