RNA–Protein interactions for RNA: ENST00000593985.5

LINC01858-202, Transcript of long intergenic non-protein coding RNA 1858, humanhuman

TSL 3

Gene LINC01858, Length 426 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01858-202ENST00000593985 AEBP2Q6ZN18 517 aaPredicted RBP36.79■■■■□ 3.48
LINC01858-202ENST00000593985 CHIC1Q5VXU3 224 aa35.42■■■■□ 3.26
LINC01858-202ENST00000593985 SENP3Q9H4L4 574 aaPredicted RBP31.35■■■□□ 2.61
LINC01858-202ENST00000593985 PHF23Q9BUL5 403 aaPredicted RBP31.06■■■□□ 2.56
LINC01858-202ENST00000593985 FOXD1Q16676 465 aa29.13■■■□□ 2.25
LINC01858-202ENST00000593985 PLPPR3Q6T4P5 718 aa28.51■■■□□ 2.15
LINC01858-202ENST00000593985 PPP6R1Q9UPN7 881 aa27.58■■■□□ 2.01
LINC01858-202ENST00000593985 ADRA2BP18089 450 aa27.5■■□□□ 1.99
LINC01858-202ENST00000593985 PIAS4Q8N2W9 510 aaPredicted RBP27.31■■□□□ 1.96
LINC01858-202ENST00000593985 MSH5O43196 834 aa27.12■■□□□ 1.93
LINC01858-202ENST00000593985 POTEDQ86YR6 584 aa25.64■■□□□ 1.7
LINC01858-202ENST00000593985 SCAF1Q9H7N4 1312 aaKnown RBP25.23■■□□□ 1.63
LINC01858-202ENST00000593985 MAPK8IP2Q13387 824 aaPredicted RBP25.1■■□□□ 1.61
LINC01858-202ENST00000593985 PPP4R3CPQ6ZMV5 832 aa25.02■■□□□ 1.6
LINC01858-202ENST00000593985 DMRT2Q9Y5R5 561 aa24.94■■□□□ 1.58
LINC01858-202ENST00000593985 CNKSR2Q8WXI2 1034 aa24.48■■□□□ 1.51
LINC01858-202ENST00000593985 NCBP3Q53F19 620 aaKnown RBP24.24■■□□□ 1.47
LINC01858-202ENST00000593985 HOXD11P31277 338 aaPredicted RBP24.21■■□□□ 1.47
LINC01858-202ENST00000593985 RNF216Q9NWF9 866 aaPredicted RBP24.15■■□□□ 1.46
LINC01858-202ENST00000593985 NPM3O75607 178 aaKnown RBP23.85■■□□□ 1.41
LINC01858-202ENST00000593985 KCNA4P22459 653 aa23.79■■□□□ 1.4
LINC01858-202ENST00000593985 DCAF8L1A6NGE4 600 aa23.78■■□□□ 1.4
LINC01858-202ENST00000593985 DNAJC5BQ9UF47 199 aa23.39■■□□□ 1.33
LINC01858-202ENST00000593985 RNF39Q9H2S5 420 aa23.19■■□□□ 1.3
LINC01858-202ENST00000593985 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.01■■□□□ 1.27
LINC01858-202ENST00000593985 CACNB1Q02641 598 aaPredicted RBP22.94■■□□□ 1.26
LINC01858-202ENST00000593985 C1QBPQ07021 282 aaKnown RBP22.89■■□□□ 1.25
LINC01858-202ENST00000593985 SLC4A2P04920 1241 aa22.67■■□□□ 1.22
LINC01858-202ENST00000593985 U3KPZ7 1027 aaPredicted RBP22.59■■□□□ 1.21
LINC01858-202ENST00000593985 SLC4A1APQ9BWU0 796 aaKnown RBP22.56■■□□□ 1.2
LINC01858-202ENST00000593985 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.17■■□□□ 1.14
LINC01858-202ENST00000593985 HNRNPUL2Q1KMD3 747 aaKnown RBP22.17■■□□□ 1.14
LINC01858-202ENST00000593985 SPINK5Q9NQ38 1064 aaPredicted RBP22.1■■□□□ 1.13
LINC01858-202ENST00000593985 FOXD4L1Q9NU39 408 aa22.08■■□□□ 1.13
LINC01858-202ENST00000593985 MYCNP04198 464 aaPredicted RBP22.07■■□□□ 1.12
LINC01858-202ENST00000593985 APLP2Q06481 763 aa22.06■■□□□ 1.12
LINC01858-202ENST00000593985 SAMD1Q6SPF0 538 aaPredicted RBP22.06■■□□□ 1.12
LINC01858-202ENST00000593985 CAPN15O75808 1086 aa22.03■■□□□ 1.12
LINC01858-202ENST00000593985 ZBTB22O15209 634 aa21.88■■□□□ 1.09
LINC01858-202ENST00000593985 DSG3P32926 999 aa21.84■■□□□ 1.09
LINC01858-202ENST00000593985 ZNF219Q9P2Y4 722 aaPredicted RBP21.83■■□□□ 1.09
LINC01858-202ENST00000593985 TRHP20396 242 aaPredicted RBP21.78■■□□□ 1.08
LINC01858-202ENST00000593985 ABCB7O75027 752 aa21.54■■□□□ 1.04
LINC01858-202ENST00000593985 ATF5Q9Y2D1 282 aaPredicted RBP21.47■■□□□ 1.03
LINC01858-202ENST00000593985 ATXN8OSP0DMR3 200 aa21.42■■□□□ 1.02
LINC01858-202ENST00000593985 POLA2Q14181 598 aa21.34■■□□□ 1.01
LINC01858-202ENST00000593985 CSRNP3Q8WYN3 585 aa21.3■■□□□ 1
LINC01858-202ENST00000593985 EHMT2Q96KQ7 1210 aa21.2■□□□□ 0.98
LINC01858-202ENST00000593985 ZBTB12Q9Y330 459 aaPredicted RBP21.01■□□□□ 0.95
LINC01858-202ENST00000593985 RBM42Q9BTD8 480 aaKnown RBP20.86■□□□□ 0.93
LINC01858-202ENST00000593985 FBLN2P98095 1184 aa20.65■□□□□ 0.9
LINC01858-202ENST00000593985 OSCARQ8IYS5 282 aa20.62■□□□□ 0.89
LINC01858-202ENST00000593985 MKRN4PQ13434 485 aaPredicted RBP20.54■□□□□ 0.88
LINC01858-202ENST00000593985 AKT1S1Q96B36 256 aa20.48■□□□□ 0.87
LINC01858-202ENST00000593985 SPDYE2BA6NHP3 402 aa20.39■□□□□ 0.85
LINC01858-202ENST00000593985 SPDYE6P0CI01 402 aa20.39■□□□□ 0.85
LINC01858-202ENST00000593985 SPDYE2Q495Y8 402 aa20.39■□□□□ 0.85
LINC01858-202ENST00000593985 REM2Q8IYK8 340 aaPredicted RBP20.26■□□□□ 0.83
LINC01858-202ENST00000593985 POTEHQ6S545 545 aa20.19■□□□□ 0.82
LINC01858-202ENST00000593985 CHRDL2Q6WN34 429 aa20.19■□□□□ 0.82
LINC01858-202ENST00000593985 ZNF692Q9BU19 519 aaPredicted RBP20.17■□□□□ 0.82
LINC01858-202ENST00000593985 SSUH2Q9Y2M2 353 aa20.17■□□□□ 0.82
LINC01858-202ENST00000593985 PITPNM1O00562 1244 aa20.02■□□□□ 0.8
LINC01858-202ENST00000593985 SPDYE1Q8NFV5 336 aaPredicted RBP19.91■□□□□ 0.78
LINC01858-202ENST00000593985 PABPN1Q86U42 306 aaKnown RBP eCLIP19.88■□□□□ 0.77
LINC01858-202ENST00000593985 SPDYE4A6NLX3 237 aa19.81■□□□□ 0.76
LINC01858-202ENST00000593985 PIP4P2Q8N4L2 257 aa19.81■□□□□ 0.76
LINC01858-202ENST00000593985 FXR2P51116 673 aaKnown RBP eCLIP19.79■□□□□ 0.76
LINC01858-202ENST00000593985 CLEC11AQ9Y240 323 aa19.76■□□□□ 0.75
LINC01858-202ENST00000593985 PRR29P0C7W0 189 aa19.55■□□□□ 0.72
LINC01858-202ENST00000593985 PRKAR2AP13861 404 aaKnown RBP19.5■□□□□ 0.71
LINC01858-202ENST00000593985 STAG3Q9UJ98 1225 aa19.49■□□□□ 0.71
LINC01858-202ENST00000593985 PROM2Q8N271 834 aa19.47■□□□□ 0.71
LINC01858-202ENST00000593985 CHADLQ6NUI6 762 aa19.33■□□□□ 0.68
LINC01858-202ENST00000593985 HAX1O00165 279 aa19.29■□□□□ 0.68
LINC01858-202ENST00000593985 FKBP8Q14318 412 aa19.25■□□□□ 0.67
LINC01858-202ENST00000593985 CREBZFQ9NS37 354 aa19.18■□□□□ 0.66
LINC01858-202ENST00000593985 SP7Q8TDD2 431 aaPredicted RBP19.16■□□□□ 0.66
LINC01858-202ENST00000593985 FARP1Q9Y4F1 1045 aaPredicted RBP19.16■□□□□ 0.66
LINC01858-202ENST00000593985 C19orf67A6NJJ6 358 aa19.13■□□□□ 0.65
LINC01858-202ENST00000593985 EVX2Q03828 476 aa19.08■□□□□ 0.64
LINC01858-202ENST00000593985 MNX1P50219 401 aaPredicted RBP18.94■□□□□ 0.62
LINC01858-202ENST00000593985 CD44P16070 742 aaKnown RBP18.91■□□□□ 0.62
LINC01858-202ENST00000593985 NPM1P06748 294 aaKnown RBP eCLIP18.86■□□□□ 0.61
LINC01858-202ENST00000593985 MIER1Q8N108 512 aa18.82■□□□□ 0.6
LINC01858-202ENST00000593985 PLEKHG5O94827 1062 aa18.8■□□□□ 0.6
LINC01858-202ENST00000593985 FBXO3Q9UK99 471 aa18.8■□□□□ 0.6
LINC01858-202ENST00000593985 PLCD3Q8N3E9 789 aa18.73■□□□□ 0.59
LINC01858-202ENST00000593985 GABBR2O75899 941 aa18.71■□□□□ 0.59
LINC01858-202ENST00000593985 ZRANB1Q9UGI0 708 aa18.71■□□□□ 0.59
LINC01858-202ENST00000593985 ZNF579Q8NAF0 562 aaKnown RBP18.69■□□□□ 0.58
LINC01858-202ENST00000593985 PAK3O75914 559 aaPredicted RBP18.68■□□□□ 0.58
LINC01858-202ENST00000593985 CLCN6P51797 869 aa18.68■□□□□ 0.58
LINC01858-202ENST00000593985 ZBTB47Q9UFB7 747 aaPredicted RBP18.62■□□□□ 0.57
LINC01858-202ENST00000593985 VASPP50552 380 aaPredicted RBP18.53■□□□□ 0.56
LINC01858-202ENST00000593985 TSPYL2Q9H2G4 693 aaPredicted RBP18.48■□□□□ 0.55
LINC01858-202ENST00000593985 PHF12Q96QT6 1004 aa18.47■□□□□ 0.55
LINC01858-202ENST00000593985 RASEFQ8IZ41 740 aa18.46■□□□□ 0.55
LINC01858-202ENST00000593985 NUBP1P53384 320 aa18.44■□□□□ 0.54
LINC01858-202ENST00000593985 CCDC61Q9Y6R9 512 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms