RNA–Protein interactions for RNA: ENST00000592294.1

CCDC68-206, Transcript of coiled-coil domain containing 68, humanhuman

TSL 5

Gene CCDC68, Length 581 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68-206ENST00000592294 AEBP2Q6ZN18 517 aaPredicted RBP23.48■■□□□ 1.35
CCDC68-206ENST00000592294 CHIC1Q5VXU3 224 aa22.41■■□□□ 1.18
CCDC68-206ENST00000592294 SENP3Q9H4L4 574 aaPredicted RBP20■□□□□ 0.79
CCDC68-206ENST00000592294 PHF23Q9BUL5 403 aaPredicted RBP19.78■□□□□ 0.76
CCDC68-206ENST00000592294 FOXD1Q16676 465 aa18.69■□□□□ 0.58
CCDC68-206ENST00000592294 PLPPR3Q6T4P5 718 aa17.96■□□□□ 0.47
CCDC68-206ENST00000592294 POTEDQ86YR6 584 aa17.95■□□□□ 0.46
CCDC68-206ENST00000592294 MSH5O43196 834 aa17.57■□□□□ 0.4
CCDC68-206ENST00000592294 PPP6R1Q9UPN7 881 aa17.54■□□□□ 0.4
CCDC68-206ENST00000592294 ADRA2BP18089 450 aa17.48■□□□□ 0.39
CCDC68-206ENST00000592294 PIAS4Q8N2W9 510 aaPredicted RBP17.44■□□□□ 0.38
CCDC68-206ENST00000592294 MAPK8IP2Q13387 824 aaPredicted RBP16.02■□□□□ 0.16
CCDC68-206ENST00000592294 SCAF1Q9H7N4 1312 aaKnown RBP16■□□□□ 0.15
CCDC68-206ENST00000592294 DMRT2Q9Y5R5 561 aa15.88■□□□□ 0.13
CCDC68-206ENST00000592294 PPP4R3CPQ6ZMV5 832 aa15.76■□□□□ 0.11
CCDC68-206ENST00000592294 CNKSR2Q8WXI2 1034 aa15.44■□□□□ 0.06
CCDC68-206ENST00000592294 HOXD11P31277 338 aaPredicted RBP15.35■□□□□ 0.05
CCDC68-206ENST00000592294 CACNB1Q02641 598 aaPredicted RBP15.29■□□□□ 0.04
CCDC68-206ENST00000592294 RNF216Q9NWF9 866 aaPredicted RBP15.26■□□□□ 0.03
CCDC68-206ENST00000592294 DCAF8L1A6NGE4 600 aa15.22■□□□□ 0.03
CCDC68-206ENST00000592294 NCBP3Q53F19 620 aaKnown RBP15.19■□□□□ 0.02
CCDC68-206ENST00000592294 RNF39Q9H2S5 420 aa15.03■□□□□ -0
CCDC68-206ENST00000592294 NPM3O75607 178 aaKnown RBP14.97□□□□□ -0.01
CCDC68-206ENST00000592294 DNAJC5BQ9UF47 199 aa14.81□□□□□ -0.04
CCDC68-206ENST00000592294 KCNA4P22459 653 aa14.79□□□□□ -0.04
CCDC68-206ENST00000592294 C1QBPQ07021 282 aaKnown RBP14.74□□□□□ -0.05
CCDC68-206ENST00000592294 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.62□□□□□ -0.07
CCDC68-206ENST00000592294 U3KPZ7 1027 aaPredicted RBP14.33□□□□□ -0.12
CCDC68-206ENST00000592294 SLC4A2P04920 1241 aa14.27□□□□□ -0.13
CCDC68-206ENST00000592294 SPINK5Q9NQ38 1064 aaPredicted RBP14.09□□□□□ -0.15
CCDC68-206ENST00000592294 CAPN15O75808 1086 aa14.05□□□□□ -0.16
CCDC68-206ENST00000592294 SLC4A1APQ9BWU0 796 aaKnown RBP13.98□□□□□ -0.17
CCDC68-206ENST00000592294 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.97□□□□□ -0.17
CCDC68-206ENST00000592294 HNRNPUL2Q1KMD3 747 aaKnown RBP13.97□□□□□ -0.17
CCDC68-206ENST00000592294 DSG3P32926 999 aa13.95□□□□□ -0.18
CCDC68-206ENST00000592294 POTEHQ6S545 545 aa13.94□□□□□ -0.18
CCDC68-206ENST00000592294 APLP2Q06481 763 aa13.93□□□□□ -0.18
CCDC68-206ENST00000592294 SAMD1Q6SPF0 538 aaPredicted RBP13.89□□□□□ -0.19
CCDC68-206ENST00000592294 EHMT2Q96KQ7 1210 aa13.89□□□□□ -0.19
CCDC68-206ENST00000592294 TRHP20396 242 aaPredicted RBP13.86□□□□□ -0.19
CCDC68-206ENST00000592294 ZNF219Q9P2Y4 722 aaPredicted RBP13.84□□□□□ -0.19
CCDC68-206ENST00000592294 MYCNP04198 464 aaPredicted RBP13.83□□□□□ -0.2
CCDC68-206ENST00000592294 FOXD4L1Q9NU39 408 aa13.75□□□□□ -0.21
CCDC68-206ENST00000592294 ABCB7O75027 752 aa13.74□□□□□ -0.21
CCDC68-206ENST00000592294 ZBTB22O15209 634 aa13.6□□□□□ -0.23
CCDC68-206ENST00000592294 CSRNP3Q8WYN3 585 aa13.57□□□□□ -0.24
CCDC68-206ENST00000592294 POLA2Q14181 598 aa13.53□□□□□ -0.24
CCDC68-206ENST00000592294 ATF5Q9Y2D1 282 aaPredicted RBP13.53□□□□□ -0.24
CCDC68-206ENST00000592294 ATXN8OSP0DMR3 200 aa13.34□□□□□ -0.27
CCDC68-206ENST00000592294 RBM42Q9BTD8 480 aaKnown RBP13.3□□□□□ -0.28
CCDC68-206ENST00000592294 ZBTB12Q9Y330 459 aaPredicted RBP13.25□□□□□ -0.29
CCDC68-206ENST00000592294 CHRDL2Q6WN34 429 aa13.12□□□□□ -0.31
CCDC68-206ENST00000592294 OSCARQ8IYS5 282 aa13.07□□□□□ -0.32
CCDC68-206ENST00000592294 AKT1S1Q96B36 256 aa13.03□□□□□ -0.32
CCDC68-206ENST00000592294 FBLN2P98095 1184 aa12.98□□□□□ -0.33
CCDC68-206ENST00000592294 REM2Q8IYK8 340 aaPredicted RBP12.91□□□□□ -0.34
CCDC68-206ENST00000592294 MKRN4PQ13434 485 aaPredicted RBP12.9□□□□□ -0.34
CCDC68-206ENST00000592294 SP7Q8TDD2 431 aaPredicted RBP12.86□□□□□ -0.35
CCDC68-206ENST00000592294 SPDYE2BA6NHP3 402 aa12.85□□□□□ -0.35
CCDC68-206ENST00000592294 SPDYE6P0CI01 402 aa12.85□□□□□ -0.35
CCDC68-206ENST00000592294 SPDYE2Q495Y8 402 aa12.85□□□□□ -0.35
CCDC68-206ENST00000592294 PITPNM1O00562 1244 aa12.76□□□□□ -0.37
CCDC68-206ENST00000592294 PIP4P2Q8N4L2 257 aa12.75□□□□□ -0.37
CCDC68-206ENST00000592294 ZNF692Q9BU19 519 aaPredicted RBP12.73□□□□□ -0.37
CCDC68-206ENST00000592294 SSUH2Q9Y2M2 353 aa12.69□□□□□ -0.38
CCDC68-206ENST00000592294 FXR2P51116 673 aaKnown RBP eCLIP12.64□□□□□ -0.39
CCDC68-206ENST00000592294 SPDYE1Q8NFV5 336 aaPredicted RBP12.6□□□□□ -0.39
CCDC68-206ENST00000592294 CLEC11AQ9Y240 323 aa12.57□□□□□ -0.4
CCDC68-206ENST00000592294 HAX1O00165 279 aa12.53□□□□□ -0.4
CCDC68-206ENST00000592294 PABPN1Q86U42 306 aaKnown RBP eCLIP12.53□□□□□ -0.4
CCDC68-206ENST00000592294 EVX2Q03828 476 aa12.51□□□□□ -0.41
CCDC68-206ENST00000592294 PRKAR2AP13861 404 aaKnown RBP12.44□□□□□ -0.42
CCDC68-206ENST00000592294 PRR29P0C7W0 189 aa12.39□□□□□ -0.43
CCDC68-206ENST00000592294 SPDYE4A6NLX3 237 aa12.35□□□□□ -0.43
CCDC68-206ENST00000592294 CHADLQ6NUI6 762 aa12.32□□□□□ -0.44
CCDC68-206ENST00000592294 C19orf67A6NJJ6 358 aa12.24□□□□□ -0.45
CCDC68-206ENST00000592294 STAG3Q9UJ98 1225 aa12.22□□□□□ -0.45
CCDC68-206ENST00000592294 FKBP8Q14318 412 aa12.2□□□□□ -0.46
CCDC68-206ENST00000592294 FARP1Q9Y4F1 1045 aaPredicted RBP12.16□□□□□ -0.46
CCDC68-206ENST00000592294 GABBR2O75899 941 aa12.14□□□□□ -0.47
CCDC68-206ENST00000592294 CREBZFQ9NS37 354 aa12.1□□□□□ -0.47
CCDC68-206ENST00000592294 PROM2Q8N271 834 aa12.07□□□□□ -0.48
CCDC68-206ENST00000592294 CD44P16070 742 aaKnown RBP12.04□□□□□ -0.48
CCDC68-206ENST00000592294 LHX8Q68G74 356 aa12.04□□□□□ -0.48
CCDC68-206ENST00000592294 POTEIP0CG38 1075 aa11.96□□□□□ -0.49
CCDC68-206ENST00000592294 MNX1P50219 401 aaPredicted RBP11.93□□□□□ -0.5
CCDC68-206ENST00000592294 ZRANB1Q9UGI0 708 aa11.9□□□□□ -0.5
CCDC68-206ENST00000592294 NPM1P06748 294 aaKnown RBP eCLIP11.89□□□□□ -0.51
CCDC68-206ENST00000592294 CLCN6P51797 869 aa11.88□□□□□ -0.51
CCDC68-206ENST00000592294 ZNF579Q8NAF0 562 aaKnown RBP11.87□□□□□ -0.51
CCDC68-206ENST00000592294 SLC24A1O60721 1099 aa11.83□□□□□ -0.52
CCDC68-206ENST00000592294 RTN4Q9NQC3 1192 aaKnown RBP11.83□□□□□ -0.52
CCDC68-206ENST00000592294 PAK3O75914 559 aaPredicted RBP11.82□□□□□ -0.52
CCDC68-206ENST00000592294 MIER1Q8N108 512 aa11.79□□□□□ -0.52
CCDC68-206ENST00000592294 PLEKHG5O94827 1062 aa11.75□□□□□ -0.53
CCDC68-206ENST00000592294 PHF12Q96QT6 1004 aa11.73□□□□□ -0.53
CCDC68-206ENST00000592294 AMER1Q5JTC6 1135 aaPredicted RBP11.72□□□□□ -0.53
CCDC68-206ENST00000592294 GALR2O43603 387 aaPredicted RBP11.71□□□□□ -0.53
CCDC68-206ENST00000592294 DCBLD2Q96PD2 775 aa11.71□□□□□ -0.53
CCDC68-206ENST00000592294 PLCD3Q8N3E9 789 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms