RNA–Protein interactions for RNA: ENST00000589482.1

ABCA6-203, Transcript of ATP binding cassette subfamily A member 6, humanhuman

TSL 3

Gene ABCA6, Length 447 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6-203ENST00000589482 AEBP2Q6ZN18 517 aaPredicted RBP20.25■□□□□ 0.83
ABCA6-203ENST00000589482 CHIC1Q5VXU3 224 aa19.05■□□□□ 0.64
ABCA6-203ENST00000589482 SENP3Q9H4L4 574 aaPredicted RBP17.35■□□□□ 0.37
ABCA6-203ENST00000589482 PHF23Q9BUL5 403 aaPredicted RBP17.06■□□□□ 0.32
ABCA6-203ENST00000589482 FOXD1Q16676 465 aa16.16■□□□□ 0.18
ABCA6-203ENST00000589482 MSH5O43196 834 aa15.25■□□□□ 0.03
ABCA6-203ENST00000589482 POTEDQ86YR6 584 aa15.22■□□□□ 0.03
ABCA6-203ENST00000589482 PLPPR3Q6T4P5 718 aa15.13■□□□□ 0.01
ABCA6-203ENST00000589482 PIAS4Q8N2W9 510 aaPredicted RBP15.06■□□□□ 0
ABCA6-203ENST00000589482 PPP6R1Q9UPN7 881 aa14.92□□□□□ -0.02
ABCA6-203ENST00000589482 ADRA2BP18089 450 aa14.85□□□□□ -0.03
ABCA6-203ENST00000589482 DMRT2Q9Y5R5 561 aa13.72□□□□□ -0.21
ABCA6-203ENST00000589482 MAPK8IP2Q13387 824 aaPredicted RBP13.7□□□□□ -0.22
ABCA6-203ENST00000589482 SCAF1Q9H7N4 1312 aaKnown RBP13.65□□□□□ -0.22
ABCA6-203ENST00000589482 PPP4R3CPQ6ZMV5 832 aa13.21□□□□□ -0.29
ABCA6-203ENST00000589482 CACNB1Q02641 598 aaPredicted RBP13.18□□□□□ -0.3
ABCA6-203ENST00000589482 HOXD11P31277 338 aaPredicted RBP13.14□□□□□ -0.31
ABCA6-203ENST00000589482 DCAF8L1A6NGE4 600 aa13.11□□□□□ -0.31
ABCA6-203ENST00000589482 CNKSR2Q8WXI2 1034 aa13.03□□□□□ -0.32
ABCA6-203ENST00000589482 RNF39Q9H2S5 420 aa12.98□□□□□ -0.33
ABCA6-203ENST00000589482 RNF216Q9NWF9 866 aaPredicted RBP12.98□□□□□ -0.33
ABCA6-203ENST00000589482 C1QBPQ07021 282 aaKnown RBP12.8□□□□□ -0.36
ABCA6-203ENST00000589482 DNAJC5BQ9UF47 199 aa12.78□□□□□ -0.36
ABCA6-203ENST00000589482 NCBP3Q53F19 620 aaKnown RBP12.66□□□□□ -0.38
ABCA6-203ENST00000589482 NPM3O75607 178 aaKnown RBP12.55□□□□□ -0.4
ABCA6-203ENST00000589482 KCNA4P22459 653 aa12.53□□□□□ -0.4
ABCA6-203ENST00000589482 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.48□□□□□ -0.41
ABCA6-203ENST00000589482 U3KPZ7 1027 aaPredicted RBP12.21□□□□□ -0.45
ABCA6-203ENST00000589482 CAPN15O75808 1086 aa12.07□□□□□ -0.48
ABCA6-203ENST00000589482 DSG3P32926 999 aa12.07□□□□□ -0.48
ABCA6-203ENST00000589482 SPINK5Q9NQ38 1064 aaPredicted RBP12.07□□□□□ -0.48
ABCA6-203ENST00000589482 SLC4A2P04920 1241 aa11.98□□□□□ -0.49
ABCA6-203ENST00000589482 POTEHQ6S545 545 aa11.9□□□□□ -0.5
ABCA6-203ENST00000589482 APLP2Q06481 763 aa11.89□□□□□ -0.51
ABCA6-203ENST00000589482 ZNF219Q9P2Y4 722 aaPredicted RBP11.84□□□□□ -0.51
ABCA6-203ENST00000589482 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.83□□□□□ -0.52
ABCA6-203ENST00000589482 HNRNPUL2Q1KMD3 747 aaKnown RBP11.83□□□□□ -0.52
ABCA6-203ENST00000589482 TRHP20396 242 aaPredicted RBP11.81□□□□□ -0.52
ABCA6-203ENST00000589482 SLC4A1APQ9BWU0 796 aaKnown RBP11.8□□□□□ -0.52
ABCA6-203ENST00000589482 ABCB7O75027 752 aa11.76□□□□□ -0.53
ABCA6-203ENST00000589482 SAMD1Q6SPF0 538 aaPredicted RBP11.74□□□□□ -0.53
ABCA6-203ENST00000589482 ZBTB22O15209 634 aa11.6□□□□□ -0.55
ABCA6-203ENST00000589482 RBM42Q9BTD8 480 aaKnown RBP11.56□□□□□ -0.56
ABCA6-203ENST00000589482 FOXD4L1Q9NU39 408 aa11.56□□□□□ -0.56
ABCA6-203ENST00000589482 MYCNP04198 464 aaPredicted RBP11.55□□□□□ -0.56
ABCA6-203ENST00000589482 POLA2Q14181 598 aa11.46□□□□□ -0.57
ABCA6-203ENST00000589482 CHRDL2Q6WN34 429 aa11.36□□□□□ -0.59
ABCA6-203ENST00000589482 ATF5Q9Y2D1 282 aaPredicted RBP11.36□□□□□ -0.59
ABCA6-203ENST00000589482 ZBTB12Q9Y330 459 aaPredicted RBP11.26□□□□□ -0.61
ABCA6-203ENST00000589482 CSRNP3Q8WYN3 585 aa11.25□□□□□ -0.61
ABCA6-203ENST00000589482 AKT1S1Q96B36 256 aa11.23□□□□□ -0.61
ABCA6-203ENST00000589482 ATXN8OSP0DMR3 200 aa11.2□□□□□ -0.62
ABCA6-203ENST00000589482 OSCARQ8IYS5 282 aa11.11□□□□□ -0.63
ABCA6-203ENST00000589482 REM2Q8IYK8 340 aaPredicted RBP11.1□□□□□ -0.63
ABCA6-203ENST00000589482 EHMT2Q96KQ7 1210 aa11.1□□□□□ -0.63
ABCA6-203ENST00000589482 SP7Q8TDD2 431 aaPredicted RBP11.06□□□□□ -0.64
ABCA6-203ENST00000589482 PIP4P2Q8N4L2 257 aa11.04□□□□□ -0.64
ABCA6-203ENST00000589482 PITPNM1O00562 1244 aa10.99□□□□□ -0.65
ABCA6-203ENST00000589482 FXR2P51116 673 aaKnown RBP eCLIP10.95□□□□□ -0.66
ABCA6-203ENST00000589482 SPDYE2BA6NHP3 402 aa10.89□□□□□ -0.67
ABCA6-203ENST00000589482 SPDYE6P0CI01 402 aa10.89□□□□□ -0.67
ABCA6-203ENST00000589482 SPDYE2Q495Y8 402 aa10.89□□□□□ -0.67
ABCA6-203ENST00000589482 HAX1O00165 279 aa10.88□□□□□ -0.67
ABCA6-203ENST00000589482 FBLN2P98095 1184 aa10.86□□□□□ -0.67
ABCA6-203ENST00000589482 MKRN4PQ13434 485 aaPredicted RBP10.86□□□□□ -0.67
ABCA6-203ENST00000589482 SPDYE1Q8NFV5 336 aaPredicted RBP10.74□□□□□ -0.69
ABCA6-203ENST00000589482 EVX2Q03828 476 aa10.71□□□□□ -0.69
ABCA6-203ENST00000589482 SSUH2Q9Y2M2 353 aa10.71□□□□□ -0.69
ABCA6-203ENST00000589482 PRKAR2AP13861 404 aaKnown RBP10.7□□□□□ -0.7
ABCA6-203ENST00000589482 ZNF692Q9BU19 519 aaPredicted RBP10.69□□□□□ -0.7
ABCA6-203ENST00000589482 CLEC11AQ9Y240 323 aa10.69□□□□□ -0.7
ABCA6-203ENST00000589482 C19orf67A6NJJ6 358 aa10.6□□□□□ -0.71
ABCA6-203ENST00000589482 PABPN1Q86U42 306 aaKnown RBP eCLIP10.51□□□□□ -0.73
ABCA6-203ENST00000589482 PRR29P0C7W0 189 aa10.5□□□□□ -0.73
ABCA6-203ENST00000589482 CHADLQ6NUI6 762 aa10.5□□□□□ -0.73
ABCA6-203ENST00000589482 GABBR2O75899 941 aa10.49□□□□□ -0.73
ABCA6-203ENST00000589482 FARP1Q9Y4F1 1045 aaPredicted RBP10.36□□□□□ -0.75
ABCA6-203ENST00000589482 SPDYE4A6NLX3 237 aa10.35□□□□□ -0.75
ABCA6-203ENST00000589482 CD44P16070 742 aaKnown RBP10.35□□□□□ -0.75
ABCA6-203ENST00000589482 LHX8Q68G74 356 aa10.35□□□□□ -0.75
ABCA6-203ENST00000589482 CLCN6P51797 869 aa10.31□□□□□ -0.76
ABCA6-203ENST00000589482 PROM2Q8N271 834 aa10.3□□□□□ -0.76
ABCA6-203ENST00000589482 POTEIP0CG38 1075 aa10.25□□□□□ -0.77
ABCA6-203ENST00000589482 STAG3Q9UJ98 1225 aa10.22□□□□□ -0.77
ABCA6-203ENST00000589482 ZNF579Q8NAF0 562 aaKnown RBP10.2□□□□□ -0.78
ABCA6-203ENST00000589482 CREBZFQ9NS37 354 aa10.19□□□□□ -0.78
ABCA6-203ENST00000589482 DCBLD2Q96PD2 775 aa10.16□□□□□ -0.78
ABCA6-203ENST00000589482 ZRANB1Q9UGI0 708 aa10.16□□□□□ -0.78
ABCA6-203ENST00000589482 FKBP8Q14318 412 aa10.07□□□□□ -0.8
ABCA6-203ENST00000589482 GALR2O43603 387 aaPredicted RBP10.06□□□□□ -0.8
ABCA6-203ENST00000589482 PAK3O75914 559 aaPredicted RBP10.06□□□□□ -0.8
ABCA6-203ENST00000589482 NPM1P06748 294 aaKnown RBP eCLIP10.01□□□□□ -0.81
ABCA6-203ENST00000589482 MNX1P50219 401 aaPredicted RBP10.01□□□□□ -0.81
ABCA6-203ENST00000589482 PHF12Q96QT6 1004 aa9.98□□□□□ -0.81
ABCA6-203ENST00000589482 OTUD5Q96G74 571 aa9.92□□□□□ -0.82
ABCA6-203ENST00000589482 POTEB2H3BUK9 544 aa9.9□□□□□ -0.82
ABCA6-203ENST00000589482 PELP1Q8IZL8 1130 aaKnown RBP9.87□□□□□ -0.83
ABCA6-203ENST00000589482 MS4A3Q96HJ5 214 aa9.87□□□□□ -0.83
ABCA6-203ENST00000589482 ASTLQ6HA08 431 aaPredicted RBP9.86□□□□□ -0.83
ABCA6-203ENST00000589482 PLSCR2Q9NRY7 297 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms