RNA–Protein interactions for RNA: ENST00000588977.1

CPD-210, Transcript of carboxypeptidase D, humanhuman

TSL 5

Gene CPD, Length 357 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPD-210ENST00000588977 AEBP2Q6ZN18 517 aaPredicted RBP22.48■■□□□ 1.19
CPD-210ENST00000588977 CHIC1Q5VXU3 224 aa22.09■■□□□ 1.13
CPD-210ENST00000588977 PHF23Q9BUL5 403 aaPredicted RBP19.43■□□□□ 0.7
CPD-210ENST00000588977 SENP3Q9H4L4 574 aaPredicted RBP19.07■□□□□ 0.64
CPD-210ENST00000588977 PLPPR3Q6T4P5 718 aa18■□□□□ 0.47
CPD-210ENST00000588977 FOXD1Q16676 465 aa17.67■□□□□ 0.42
CPD-210ENST00000588977 ADRA2BP18089 450 aa17.09■□□□□ 0.33
CPD-210ENST00000588977 PPP6R1Q9UPN7 881 aa17.09■□□□□ 0.33
CPD-210ENST00000588977 PIAS4Q8N2W9 510 aaPredicted RBP16.7■□□□□ 0.26
CPD-210ENST00000588977 MSH5O43196 834 aa16.25■□□□□ 0.19
CPD-210ENST00000588977 PPP4R3CPQ6ZMV5 832 aa15.87■□□□□ 0.13
CPD-210ENST00000588977 KCNA4P22459 653 aa15.66■□□□□ 0.1
CPD-210ENST00000588977 SCAF1Q9H7N4 1312 aaKnown RBP15.65■□□□□ 0.1
CPD-210ENST00000588977 NCBP3Q53F19 620 aaKnown RBP15.5■□□□□ 0.07
CPD-210ENST00000588977 MAPK8IP2Q13387 824 aaPredicted RBP15.45■□□□□ 0.06
CPD-210ENST00000588977 CNKSR2Q8WXI2 1034 aa15.4■□□□□ 0.06
CPD-210ENST00000588977 NPM3O75607 178 aaKnown RBP15.27■□□□□ 0.04
CPD-210ENST00000588977 DMRT2Q9Y5R5 561 aa15.24■□□□□ 0.03
CPD-210ENST00000588977 RNF216Q9NWF9 866 aaPredicted RBP15.07■□□□□ 0
CPD-210ENST00000588977 HOXD11P31277 338 aaPredicted RBP14.98□□□□□ -0.01
CPD-210ENST00000588977 SLC4A1APQ9BWU0 796 aaKnown RBP14.94□□□□□ -0.02
CPD-210ENST00000588977 DNAJC5BQ9UF47 199 aa14.83□□□□□ -0.04
CPD-210ENST00000588977 EHMT2Q96KQ7 1210 aa14.66□□□□□ -0.06
CPD-210ENST00000588977 POTEDQ86YR6 584 aa14.56□□□□□ -0.08
CPD-210ENST00000588977 DCAF8L1A6NGE4 600 aa14.55□□□□□ -0.08
CPD-210ENST00000588977 CSRNP3Q8WYN3 585 aa14.43□□□□□ -0.1
CPD-210ENST00000588977 ZBTB22O15209 634 aa14.41□□□□□ -0.1
CPD-210ENST00000588977 SLC4A2P04920 1241 aa14.39□□□□□ -0.11
CPD-210ENST00000588977 FOXD4L1Q9NU39 408 aa14.38□□□□□ -0.11
CPD-210ENST00000588977 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.26□□□□□ -0.13
CPD-210ENST00000588977 MYCNP04198 464 aaPredicted RBP14.12□□□□□ -0.15
CPD-210ENST00000588977 U3KPZ7 1027 aaPredicted RBP14.06□□□□□ -0.16
CPD-210ENST00000588977 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.93□□□□□ -0.18
CPD-210ENST00000588977 HNRNPUL2Q1KMD3 747 aaKnown RBP13.93□□□□□ -0.18
CPD-210ENST00000588977 RNF39Q9H2S5 420 aa13.93□□□□□ -0.18
CPD-210ENST00000588977 SAMD1Q6SPF0 538 aaPredicted RBP13.88□□□□□ -0.19
CPD-210ENST00000588977 ATXN8OSP0DMR3 200 aa13.86□□□□□ -0.19
CPD-210ENST00000588977 C1QBPQ07021 282 aaKnown RBP13.78□□□□□ -0.2
CPD-210ENST00000588977 APLP2Q06481 763 aa13.76□□□□□ -0.21
CPD-210ENST00000588977 ATF5Q9Y2D1 282 aaPredicted RBP13.71□□□□□ -0.21
CPD-210ENST00000588977 SPINK5Q9NQ38 1064 aaPredicted RBP13.62□□□□□ -0.23
CPD-210ENST00000588977 CAPN15O75808 1086 aa13.56□□□□□ -0.24
CPD-210ENST00000588977 ZNF219Q9P2Y4 722 aaPredicted RBP13.54□□□□□ -0.24
CPD-210ENST00000588977 TRHP20396 242 aaPredicted RBP13.52□□□□□ -0.25
CPD-210ENST00000588977 CACNB1Q02641 598 aaPredicted RBP13.46□□□□□ -0.25
CPD-210ENST00000588977 POLA2Q14181 598 aa13.33□□□□□ -0.28
CPD-210ENST00000588977 ABCB7O75027 752 aa13.31□□□□□ -0.28
CPD-210ENST00000588977 DSG3P32926 999 aa13.3□□□□□ -0.28
CPD-210ENST00000588977 FBLN2P98095 1184 aa13.14□□□□□ -0.31
CPD-210ENST00000588977 ZBTB12Q9Y330 459 aaPredicted RBP13.14□□□□□ -0.31
CPD-210ENST00000588977 MKRN4PQ13434 485 aaPredicted RBP13.13□□□□□ -0.31
CPD-210ENST00000588977 FKBP8Q14318 412 aa13.04□□□□□ -0.32
CPD-210ENST00000588977 SPDYE4A6NLX3 237 aa12.9□□□□□ -0.34
CPD-210ENST00000588977 OSCARQ8IYS5 282 aa12.89□□□□□ -0.35
CPD-210ENST00000588977 SPDYE2BA6NHP3 402 aa12.8□□□□□ -0.36
CPD-210ENST00000588977 SPDYE6P0CI01 402 aa12.8□□□□□ -0.36
CPD-210ENST00000588977 SPDYE2Q495Y8 402 aa12.8□□□□□ -0.36
CPD-210ENST00000588977 ZNF692Q9BU19 519 aaPredicted RBP12.75□□□□□ -0.37
CPD-210ENST00000588977 PROM2Q8N271 834 aa12.73□□□□□ -0.37
CPD-210ENST00000588977 SSUH2Q9Y2M2 353 aa12.71□□□□□ -0.37
CPD-210ENST00000588977 RBM42Q9BTD8 480 aaKnown RBP12.68□□□□□ -0.38
CPD-210ENST00000588977 PABPN1Q86U42 306 aaKnown RBP eCLIP12.59□□□□□ -0.39
CPD-210ENST00000588977 AKT1S1Q96B36 256 aa12.55□□□□□ -0.4
CPD-210ENST00000588977 FBXO3Q9UK99 471 aa12.54□□□□□ -0.4
CPD-210ENST00000588977 REM2Q8IYK8 340 aaPredicted RBP12.42□□□□□ -0.42
CPD-210ENST00000588977 STAG3Q9UJ98 1225 aa12.41□□□□□ -0.42
CPD-210ENST00000588977 VASPP50552 380 aaPredicted RBP12.38□□□□□ -0.43
CPD-210ENST00000588977 SPDYE1Q8NFV5 336 aaPredicted RBP12.38□□□□□ -0.43
CPD-210ENST00000588977 CLEC11AQ9Y240 323 aa12.3□□□□□ -0.44
CPD-210ENST00000588977 PITPNM1O00562 1244 aa12.29□□□□□ -0.44
CPD-210ENST00000588977 PRR29P0C7W0 189 aa12.22□□□□□ -0.45
CPD-210ENST00000588977 PLCD3Q8N3E9 789 aa12.21□□□□□ -0.45
CPD-210ENST00000588977 IFNLR1Q8IU57 520 aaPredicted RBP12.2□□□□□ -0.46
CPD-210ENST00000588977 MIER1Q8N108 512 aa12.2□□□□□ -0.46
CPD-210ENST00000588977 PLEKHG5O94827 1062 aa12.15□□□□□ -0.46
CPD-210ENST00000588977 AMER1Q5JTC6 1135 aaPredicted RBP12.13□□□□□ -0.47
CPD-210ENST00000588977 KLHL34Q8N239 644 aa12.11□□□□□ -0.47
CPD-210ENST00000588977 CHRDL2Q6WN34 429 aa12.1□□□□□ -0.47
CPD-210ENST00000588977 CREBZFQ9NS37 354 aa12.1□□□□□ -0.47
CPD-210ENST00000588977 RTN4Q9NQC3 1192 aaKnown RBP12.08□□□□□ -0.48
CPD-210ENST00000588977 ZBTB47Q9UFB7 747 aaPredicted RBP12.08□□□□□ -0.48
CPD-210ENST00000588977 SPOCK2Q92563 424 aa12.05□□□□□ -0.48
CPD-210ENST00000588977 FXR2P51116 673 aaKnown RBP eCLIP12.03□□□□□ -0.48
CPD-210ENST00000588977 MNX1P50219 401 aaPredicted RBP11.99□□□□□ -0.49
CPD-210ENST00000588977 CHADLQ6NUI6 762 aa11.99□□□□□ -0.49
CPD-210ENST00000588977 PRKAR2AP13861 404 aaKnown RBP11.97□□□□□ -0.49
CPD-210ENST00000588977 PIP4P2Q8N4L2 257 aa11.97□□□□□ -0.49
CPD-210ENST00000588977 NPM1P06748 294 aaKnown RBP eCLIP11.9□□□□□ -0.5
CPD-210ENST00000588977 NUBP1P53384 320 aa11.9□□□□□ -0.5
CPD-210ENST00000588977 FARP1Q9Y4F1 1045 aaPredicted RBP11.9□□□□□ -0.5
CPD-210ENST00000588977 PKD2Q13563 968 aa11.85□□□□□ -0.51
CPD-210ENST00000588977 RASEFQ8IZ41 740 aa11.82□□□□□ -0.52
CPD-210ENST00000588977 CIZ1Q9ULV3 898 aaPredicted RBP11.82□□□□□ -0.52
CPD-210ENST00000588977 FAM212AQ96EL1 285 aa11.81□□□□□ -0.52
CPD-210ENST00000588977 GSE1Q14687 1217 aa11.8□□□□□ -0.52
CPD-210ENST00000588977 DCAF8Q5TAQ9 597 aa11.78□□□□□ -0.52
CPD-210ENST00000588977 ECM2O94769 699 aaPredicted RBP11.76□□□□□ -0.53
CPD-210ENST00000588977 TRIM41Q8WV44 630 aa11.74□□□□□ -0.53
CPD-210ENST00000588977 TSPYL2Q9H2G4 693 aaPredicted RBP11.7□□□□□ -0.54
CPD-210ENST00000588977 PAK3O75914 559 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms