RNA–Protein interactions for RNA: ENST00000588904.1

LINC01535-203, Transcript of long intergenic non-protein coding RNA 1535, humanhuman

TSL 3

Gene LINC01535, Length 257 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01535-203ENST00000588904 AEBP2Q6ZN18 517 aaPredicted RBP16.68■□□□□ 0.26
LINC01535-203ENST00000588904 CHIC1Q5VXU3 224 aa16.07■□□□□ 0.16
LINC01535-203ENST00000588904 PHF23Q9BUL5 403 aaPredicted RBP14.2□□□□□ -0.14
LINC01535-203ENST00000588904 SENP3Q9H4L4 574 aaPredicted RBP14.01□□□□□ -0.17
LINC01535-203ENST00000588904 FOXD1Q16676 465 aa13.12□□□□□ -0.31
LINC01535-203ENST00000588904 PLPPR3Q6T4P5 718 aa12.92□□□□□ -0.34
LINC01535-203ENST00000588904 PPP6R1Q9UPN7 881 aa12.58□□□□□ -0.4
LINC01535-203ENST00000588904 ADRA2BP18089 450 aa12.51□□□□□ -0.41
LINC01535-203ENST00000588904 PIAS4Q8N2W9 510 aaPredicted RBP12.27□□□□□ -0.45
LINC01535-203ENST00000588904 MSH5O43196 834 aa12.02□□□□□ -0.49
LINC01535-203ENST00000588904 MAPK8IP2Q13387 824 aaPredicted RBP11.42□□□□□ -0.58
LINC01535-203ENST00000588904 PPP4R3CPQ6ZMV5 832 aa11.41□□□□□ -0.58
LINC01535-203ENST00000588904 POTEDQ86YR6 584 aa11.29□□□□□ -0.6
LINC01535-203ENST00000588904 SCAF1Q9H7N4 1312 aaKnown RBP11.26□□□□□ -0.61
LINC01535-203ENST00000588904 DMRT2Q9Y5R5 561 aa11.21□□□□□ -0.61
LINC01535-203ENST00000588904 CNKSR2Q8WXI2 1034 aa11.09□□□□□ -0.63
LINC01535-203ENST00000588904 KCNA4P22459 653 aa11.06□□□□□ -0.64
LINC01535-203ENST00000588904 NCBP3Q53F19 620 aaKnown RBP10.96□□□□□ -0.65
LINC01535-203ENST00000588904 NPM3O75607 178 aaKnown RBP10.95□□□□□ -0.66
LINC01535-203ENST00000588904 HOXD11P31277 338 aaPredicted RBP10.94□□□□□ -0.66
LINC01535-203ENST00000588904 RNF216Q9NWF9 866 aaPredicted RBP10.91□□□□□ -0.66
LINC01535-203ENST00000588904 DCAF8L1A6NGE4 600 aa10.66□□□□□ -0.7
LINC01535-203ENST00000588904 DNAJC5BQ9UF47 199 aa10.62□□□□□ -0.71
LINC01535-203ENST00000588904 SLC4A1APQ9BWU0 796 aaKnown RBP10.42□□□□□ -0.74
LINC01535-203ENST00000588904 SLC4A2P04920 1241 aa10.41□□□□□ -0.74
LINC01535-203ENST00000588904 RNF39Q9H2S5 420 aa10.37□□□□□ -0.75
LINC01535-203ENST00000588904 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.34□□□□□ -0.75
LINC01535-203ENST00000588904 U3KPZ7 1027 aaPredicted RBP10.27□□□□□ -0.77
LINC01535-203ENST00000588904 ZBTB22O15209 634 aa10.24□□□□□ -0.77
LINC01535-203ENST00000588904 C1QBPQ07021 282 aaKnown RBP10.16□□□□□ -0.78
LINC01535-203ENST00000588904 FOXD4L1Q9NU39 408 aa10.14□□□□□ -0.79
LINC01535-203ENST00000588904 CACNB1Q02641 598 aaPredicted RBP10.13□□□□□ -0.79
LINC01535-203ENST00000588904 MYCNP04198 464 aaPredicted RBP10.05□□□□□ -0.8
LINC01535-203ENST00000588904 SPINK5Q9NQ38 1064 aaPredicted RBP10.04□□□□□ -0.8
LINC01535-203ENST00000588904 CSRNP3Q8WYN3 585 aa10.02□□□□□ -0.81
LINC01535-203ENST00000588904 EHMT2Q96KQ7 1210 aa10.02□□□□□ -0.81
LINC01535-203ENST00000588904 ATF5Q9Y2D1 282 aaPredicted RBP9.93□□□□□ -0.82
LINC01535-203ENST00000588904 SAMD1Q6SPF0 538 aaPredicted RBP9.92□□□□□ -0.82
LINC01535-203ENST00000588904 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.91□□□□□ -0.82
LINC01535-203ENST00000588904 HNRNPUL2Q1KMD3 747 aaKnown RBP9.91□□□□□ -0.82
LINC01535-203ENST00000588904 CAPN15O75808 1086 aa9.9□□□□□ -0.82
LINC01535-203ENST00000588904 TRHP20396 242 aaPredicted RBP9.84□□□□□ -0.83
LINC01535-203ENST00000588904 DSG3P32926 999 aa9.84□□□□□ -0.83
LINC01535-203ENST00000588904 APLP2Q06481 763 aa9.8□□□□□ -0.84
LINC01535-203ENST00000588904 ZNF219Q9P2Y4 722 aaPredicted RBP9.79□□□□□ -0.84
LINC01535-203ENST00000588904 ABCB7O75027 752 aa9.77□□□□□ -0.85
LINC01535-203ENST00000588904 ATXN8OSP0DMR3 200 aa9.76□□□□□ -0.85
LINC01535-203ENST00000588904 POLA2Q14181 598 aa9.65□□□□□ -0.86
LINC01535-203ENST00000588904 MKRN4PQ13434 485 aaPredicted RBP9.47□□□□□ -0.89
LINC01535-203ENST00000588904 OSCARQ8IYS5 282 aa9.38□□□□□ -0.91
LINC01535-203ENST00000588904 ZBTB12Q9Y330 459 aaPredicted RBP9.38□□□□□ -0.91
LINC01535-203ENST00000588904 FBLN2P98095 1184 aa9.31□□□□□ -0.92
LINC01535-203ENST00000588904 RBM42Q9BTD8 480 aaKnown RBP9.25□□□□□ -0.93
LINC01535-203ENST00000588904 SPDYE2BA6NHP3 402 aa9.19□□□□□ -0.94
LINC01535-203ENST00000588904 SPDYE6P0CI01 402 aa9.19□□□□□ -0.94
LINC01535-203ENST00000588904 SPDYE2Q495Y8 402 aa9.19□□□□□ -0.94
LINC01535-203ENST00000588904 SSUH2Q9Y2M2 353 aa9.18□□□□□ -0.94
LINC01535-203ENST00000588904 AKT1S1Q96B36 256 aa9.16□□□□□ -0.94
LINC01535-203ENST00000588904 ZNF692Q9BU19 519 aaPredicted RBP9.13□□□□□ -0.95
LINC01535-203ENST00000588904 REM2Q8IYK8 340 aaPredicted RBP9.12□□□□□ -0.95
LINC01535-203ENST00000588904 SPDYE4A6NLX3 237 aa9.08□□□□□ -0.96
LINC01535-203ENST00000588904 PITPNM1O00562 1244 aa9.04□□□□□ -0.96
LINC01535-203ENST00000588904 PABPN1Q86U42 306 aaKnown RBP eCLIP9.04□□□□□ -0.96
LINC01535-203ENST00000588904 FKBP8Q14318 412 aa9□□□□□ -0.97
LINC01535-203ENST00000588904 PROM2Q8N271 834 aa9□□□□□ -0.97
LINC01535-203ENST00000588904 CHRDL2Q6WN34 429 aa8.99□□□□□ -0.97
LINC01535-203ENST00000588904 SPDYE1Q8NFV5 336 aaPredicted RBP8.92□□□□□ -0.98
LINC01535-203ENST00000588904 CLEC11AQ9Y240 323 aa8.92□□□□□ -0.98
LINC01535-203ENST00000588904 FXR2P51116 673 aaKnown RBP eCLIP8.89□□□□□ -0.99
LINC01535-203ENST00000588904 PIP4P2Q8N4L2 257 aa8.89□□□□□ -0.99
LINC01535-203ENST00000588904 POTEHQ6S545 545 aa8.87□□□□□ -0.99
LINC01535-203ENST00000588904 CHADLQ6NUI6 762 aa8.81□□□□□ -1
LINC01535-203ENST00000588904 PRR29P0C7W0 189 aa8.8□□□□□ -1
LINC01535-203ENST00000588904 PRKAR2AP13861 404 aaKnown RBP8.77□□□□□ -1.01
LINC01535-203ENST00000588904 STAG3Q9UJ98 1225 aa8.77□□□□□ -1.01
LINC01535-203ENST00000588904 CREBZFQ9NS37 354 aa8.76□□□□□ -1.01
LINC01535-203ENST00000588904 MNX1P50219 401 aaPredicted RBP8.69□□□□□ -1.02
LINC01535-203ENST00000588904 FARP1Q9Y4F1 1045 aaPredicted RBP8.64□□□□□ -1.03
LINC01535-203ENST00000588904 EVX2Q03828 476 aa8.63□□□□□ -1.03
LINC01535-203ENST00000588904 FBXO3Q9UK99 471 aa8.6□□□□□ -1.03
LINC01535-203ENST00000588904 VASPP50552 380 aaPredicted RBP8.59□□□□□ -1.03
LINC01535-203ENST00000588904 C19orf67A6NJJ6 358 aa8.58□□□□□ -1.04
LINC01535-203ENST00000588904 MIER1Q8N108 512 aa8.58□□□□□ -1.04
LINC01535-203ENST00000588904 HAX1O00165 279 aa8.56□□□□□ -1.04
LINC01535-203ENST00000588904 PLCD3Q8N3E9 789 aa8.55□□□□□ -1.04
LINC01535-203ENST00000588904 IFNLR1Q8IU57 520 aaPredicted RBP8.52□□□□□ -1.05
LINC01535-203ENST00000588904 CD44P16070 742 aaKnown RBP8.5□□□□□ -1.05
LINC01535-203ENST00000588904 NUBP1P53384 320 aa8.48□□□□□ -1.05
LINC01535-203ENST00000588904 RASEFQ8IZ41 740 aa8.48□□□□□ -1.05
LINC01535-203ENST00000588904 NPM1P06748 294 aaKnown RBP eCLIP8.47□□□□□ -1.05
LINC01535-203ENST00000588904 SP7Q8TDD2 431 aaPredicted RBP8.46□□□□□ -1.06
LINC01535-203ENST00000588904 PLEKHG5O94827 1062 aa8.44□□□□□ -1.06
LINC01535-203ENST00000588904 ZRANB1Q9UGI0 708 aa8.43□□□□□ -1.06
LINC01535-203ENST00000588904 TSPYL2Q9H2G4 693 aaPredicted RBP8.41□□□□□ -1.06
LINC01535-203ENST00000588904 ZNF579Q8NAF0 562 aaKnown RBP8.4□□□□□ -1.06
LINC01535-203ENST00000588904 PHF12Q96QT6 1004 aa8.4□□□□□ -1.06
LINC01535-203ENST00000588904 ZBTB47Q9UFB7 747 aaPredicted RBP8.4□□□□□ -1.06
LINC01535-203ENST00000588904 CCDC61Q9Y6R9 512 aa8.4□□□□□ -1.06
LINC01535-203ENST00000588904 KLHL34Q8N239 644 aa8.39□□□□□ -1.07
LINC01535-203ENST00000588904 GABBR2O75899 941 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms