RNA–Protein interactions for RNA: ENST00000588631.5

PIK3C3-209, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 4

Gene PIK3C3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-209ENST00000588631 AEBP2Q6ZN18 517 aaPredicted RBP27.17■■□□□ 1.94
PIK3C3-209ENST00000588631 CHIC1Q5VXU3 224 aa25.68■■□□□ 1.7
PIK3C3-209ENST00000588631 SENP3Q9H4L4 574 aaPredicted RBP23.17■■□□□ 1.3
PIK3C3-209ENST00000588631 PHF23Q9BUL5 403 aaPredicted RBP22.83■■□□□ 1.25
PIK3C3-209ENST00000588631 FOXD1Q16676 465 aa21.6■■□□□ 1.05
PIK3C3-209ENST00000588631 PLPPR3Q6T4P5 718 aa20.45■□□□□ 0.86
PIK3C3-209ENST00000588631 MSH5O43196 834 aa20.26■□□□□ 0.83
PIK3C3-209ENST00000588631 PIAS4Q8N2W9 510 aaPredicted RBP20.14■□□□□ 0.81
PIK3C3-209ENST00000588631 PPP6R1Q9UPN7 881 aa20.12■□□□□ 0.81
PIK3C3-209ENST00000588631 ADRA2BP18089 450 aa20.02■□□□□ 0.8
PIK3C3-209ENST00000588631 POTEDQ86YR6 584 aa19.97■□□□□ 0.79
PIK3C3-209ENST00000588631 MAPK8IP2Q13387 824 aaPredicted RBP18.42■□□□□ 0.54
PIK3C3-209ENST00000588631 DMRT2Q9Y5R5 561 aa18.37■□□□□ 0.53
PIK3C3-209ENST00000588631 SCAF1Q9H7N4 1312 aaKnown RBP18.28■□□□□ 0.52
PIK3C3-209ENST00000588631 PPP4R3CPQ6ZMV5 832 aa17.9■□□□□ 0.46
PIK3C3-209ENST00000588631 HOXD11P31277 338 aaPredicted RBP17.67■□□□□ 0.42
PIK3C3-209ENST00000588631 CNKSR2Q8WXI2 1034 aa17.6■□□□□ 0.41
PIK3C3-209ENST00000588631 DCAF8L1A6NGE4 600 aa17.51■□□□□ 0.39
PIK3C3-209ENST00000588631 RNF216Q9NWF9 866 aaPredicted RBP17.48■□□□□ 0.39
PIK3C3-209ENST00000588631 CACNB1Q02641 598 aaPredicted RBP17.4■□□□□ 0.38
PIK3C3-209ENST00000588631 RNF39Q9H2S5 420 aa17.3■□□□□ 0.36
PIK3C3-209ENST00000588631 NCBP3Q53F19 620 aaKnown RBP17.15■□□□□ 0.34
PIK3C3-209ENST00000588631 DNAJC5BQ9UF47 199 aa17.1■□□□□ 0.33
PIK3C3-209ENST00000588631 C1QBPQ07021 282 aaKnown RBP17.02■□□□□ 0.32
PIK3C3-209ENST00000588631 NPM3O75607 178 aaKnown RBP16.95■□□□□ 0.3
PIK3C3-209ENST00000588631 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.74■□□□□ 0.27
PIK3C3-209ENST00000588631 KCNA4P22459 653 aa16.52■□□□□ 0.24
PIK3C3-209ENST00000588631 U3KPZ7 1027 aaPredicted RBP16.45■□□□□ 0.22
PIK3C3-209ENST00000588631 SLC4A2P04920 1241 aa16.23■□□□□ 0.19
PIK3C3-209ENST00000588631 SPINK5Q9NQ38 1064 aaPredicted RBP16.22■□□□□ 0.19
PIK3C3-209ENST00000588631 CAPN15O75808 1086 aa16.15■□□□□ 0.18
PIK3C3-209ENST00000588631 DSG3P32926 999 aa16.15■□□□□ 0.18
PIK3C3-209ENST00000588631 APLP2Q06481 763 aa15.93■□□□□ 0.14
PIK3C3-209ENST00000588631 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.9■□□□□ 0.14
PIK3C3-209ENST00000588631 HNRNPUL2Q1KMD3 747 aaKnown RBP15.9■□□□□ 0.14
PIK3C3-209ENST00000588631 ZNF219Q9P2Y4 722 aaPredicted RBP15.88■□□□□ 0.13
PIK3C3-209ENST00000588631 TRHP20396 242 aaPredicted RBP15.86■□□□□ 0.13
PIK3C3-209ENST00000588631 SAMD1Q6SPF0 538 aaPredicted RBP15.82■□□□□ 0.12
PIK3C3-209ENST00000588631 ABCB7O75027 752 aa15.79■□□□□ 0.12
PIK3C3-209ENST00000588631 MYCNP04198 464 aaPredicted RBP15.67■□□□□ 0.1
PIK3C3-209ENST00000588631 POTEHQ6S545 545 aa15.62■□□□□ 0.09
PIK3C3-209ENST00000588631 SLC4A1APQ9BWU0 796 aaKnown RBP15.55■□□□□ 0.08
PIK3C3-209ENST00000588631 FOXD4L1Q9NU39 408 aa15.46■□□□□ 0.07
PIK3C3-209ENST00000588631 POLA2Q14181 598 aa15.43■□□□□ 0.06
PIK3C3-209ENST00000588631 RBM42Q9BTD8 480 aaKnown RBP15.39■□□□□ 0.05
PIK3C3-209ENST00000588631 ATF5Q9Y2D1 282 aaPredicted RBP15.33■□□□□ 0.04
PIK3C3-209ENST00000588631 ZBTB22O15209 634 aa15.22■□□□□ 0.03
PIK3C3-209ENST00000588631 ZBTB12Q9Y330 459 aaPredicted RBP15.13■□□□□ 0.01
PIK3C3-209ENST00000588631 CHRDL2Q6WN34 429 aa15.1■□□□□ 0.01
PIK3C3-209ENST00000588631 AKT1S1Q96B36 256 aa15.02■□□□□ -0
PIK3C3-209ENST00000588631 ATXN8OSP0DMR3 200 aa15□□□□□ -0.01
PIK3C3-209ENST00000588631 OSCARQ8IYS5 282 aa14.98□□□□□ -0.01
PIK3C3-209ENST00000588631 REM2Q8IYK8 340 aaPredicted RBP14.87□□□□□ -0.03
PIK3C3-209ENST00000588631 PITPNM1O00562 1244 aa14.74□□□□□ -0.05
PIK3C3-209ENST00000588631 PIP4P2Q8N4L2 257 aa14.73□□□□□ -0.05
PIK3C3-209ENST00000588631 FBLN2P98095 1184 aa14.69□□□□□ -0.06
PIK3C3-209ENST00000588631 SPDYE2BA6NHP3 402 aa14.67□□□□□ -0.06
PIK3C3-209ENST00000588631 SPDYE6P0CI01 402 aa14.67□□□□□ -0.06
PIK3C3-209ENST00000588631 SPDYE2Q495Y8 402 aa14.67□□□□□ -0.06
PIK3C3-209ENST00000588631 FXR2P51116 673 aaKnown RBP eCLIP14.64□□□□□ -0.07
PIK3C3-209ENST00000588631 MKRN4PQ13434 485 aaPredicted RBP14.63□□□□□ -0.07
PIK3C3-209ENST00000588631 SP7Q8TDD2 431 aaPredicted RBP14.59□□□□□ -0.07
PIK3C3-209ENST00000588631 SSUH2Q9Y2M2 353 aa14.5□□□□□ -0.09
PIK3C3-209ENST00000588631 ZNF692Q9BU19 519 aaPredicted RBP14.43□□□□□ -0.1
PIK3C3-209ENST00000588631 HAX1O00165 279 aa14.42□□□□□ -0.1
PIK3C3-209ENST00000588631 SPDYE1Q8NFV5 336 aaPredicted RBP14.42□□□□□ -0.1
PIK3C3-209ENST00000588631 CSRNP3Q8WYN3 585 aa14.39□□□□□ -0.11
PIK3C3-209ENST00000588631 CLEC11AQ9Y240 323 aa14.35□□□□□ -0.11
PIK3C3-209ENST00000588631 PRKAR2AP13861 404 aaKnown RBP14.32□□□□□ -0.12
PIK3C3-209ENST00000588631 EVX2Q03828 476 aa14.3□□□□□ -0.12
PIK3C3-209ENST00000588631 PABPN1Q86U42 306 aaKnown RBP eCLIP14.23□□□□□ -0.13
PIK3C3-209ENST00000588631 C19orf67A6NJJ6 358 aa14.17□□□□□ -0.14
PIK3C3-209ENST00000588631 CHADLQ6NUI6 762 aa14.13□□□□□ -0.15
PIK3C3-209ENST00000588631 PRR29P0C7W0 189 aa14.12□□□□□ -0.15
PIK3C3-209ENST00000588631 EHMT2Q96KQ7 1210 aa14.08□□□□□ -0.16
PIK3C3-209ENST00000588631 GABBR2O75899 941 aa13.96□□□□□ -0.17
PIK3C3-209ENST00000588631 FARP1Q9Y4F1 1045 aaPredicted RBP13.93□□□□□ -0.18
PIK3C3-209ENST00000588631 CD44P16070 742 aaKnown RBP13.86□□□□□ -0.19
PIK3C3-209ENST00000588631 SPDYE4A6NLX3 237 aa13.84□□□□□ -0.19
PIK3C3-209ENST00000588631 STAG3Q9UJ98 1225 aa13.81□□□□□ -0.2
PIK3C3-209ENST00000588631 CREBZFQ9NS37 354 aa13.8□□□□□ -0.2
PIK3C3-209ENST00000588631 CLCN6P51797 869 aa13.71□□□□□ -0.21
PIK3C3-209ENST00000588631 POTEIP0CG38 1075 aa13.7□□□□□ -0.22
PIK3C3-209ENST00000588631 ZNF579Q8NAF0 562 aaKnown RBP13.69□□□□□ -0.22
PIK3C3-209ENST00000588631 LHX8Q68G74 356 aa13.66□□□□□ -0.22
PIK3C3-209ENST00000588631 ZRANB1Q9UGI0 708 aa13.64□□□□□ -0.23
PIK3C3-209ENST00000588631 MNX1P50219 401 aaPredicted RBP13.58□□□□□ -0.24
PIK3C3-209ENST00000588631 PROM2Q8N271 834 aa13.58□□□□□ -0.24
PIK3C3-209ENST00000588631 DCBLD2Q96PD2 775 aa13.52□□□□□ -0.25
PIK3C3-209ENST00000588631 GALR2O43603 387 aaPredicted RBP13.51□□□□□ -0.25
PIK3C3-209ENST00000588631 NPM1P06748 294 aaKnown RBP eCLIP13.49□□□□□ -0.25
PIK3C3-209ENST00000588631 PAK3O75914 559 aaPredicted RBP13.48□□□□□ -0.25
PIK3C3-209ENST00000588631 PHF12Q96QT6 1004 aa13.46□□□□□ -0.25
PIK3C3-209ENST00000588631 MS4A3Q96HJ5 214 aa13.29□□□□□ -0.28
PIK3C3-209ENST00000588631 PELP1Q8IZL8 1130 aaKnown RBP13.26□□□□□ -0.29
PIK3C3-209ENST00000588631 CCDC61Q9Y6R9 512 aa13.25□□□□□ -0.29
PIK3C3-209ENST00000588631 POTEB2H3BUK9 544 aa13.24□□□□□ -0.29
PIK3C3-209ENST00000588631 ASTLQ6HA08 431 aaPredicted RBP13.24□□□□□ -0.29
PIK3C3-209ENST00000588631 TSPYL2Q9H2G4 693 aaPredicted RBP13.23□□□□□ -0.29
PIK3C3-209ENST00000588631 OTUD5Q96G74 571 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms