RNA–Protein interactions for RNA: ENST00000588276.5

BECN1-208, Transcript of beclin 1, humanhuman

TSL 3

Gene BECN1, Length 769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-208ENST00000588276 AEBP2Q6ZN18 517 aaPredicted RBP31.08■■■□□ 2.57
BECN1-208ENST00000588276 CHIC1Q5VXU3 224 aa30.43■■■□□ 2.46
BECN1-208ENST00000588276 PHF23Q9BUL5 403 aaPredicted RBP26.75■■□□□ 1.87
BECN1-208ENST00000588276 SENP3Q9H4L4 574 aaPredicted RBP26.38■■□□□ 1.81
BECN1-208ENST00000588276 PLPPR3Q6T4P5 718 aa24.73■■□□□ 1.55
BECN1-208ENST00000588276 FOXD1Q16676 465 aa24.46■■□□□ 1.51
BECN1-208ENST00000588276 PPP6R1Q9UPN7 881 aa23.57■■□□□ 1.36
BECN1-208ENST00000588276 ADRA2BP18089 450 aa23.55■■□□□ 1.36
BECN1-208ENST00000588276 PIAS4Q8N2W9 510 aaPredicted RBP23.08■■□□□ 1.29
BECN1-208ENST00000588276 MSH5O43196 834 aa22.55■■□□□ 1.2
BECN1-208ENST00000588276 PPP4R3CPQ6ZMV5 832 aa21.79■■□□□ 1.08
BECN1-208ENST00000588276 SCAF1Q9H7N4 1312 aaKnown RBP21.55■■□□□ 1.04
BECN1-208ENST00000588276 KCNA4P22459 653 aa21.35■■□□□ 1.01
BECN1-208ENST00000588276 MAPK8IP2Q13387 824 aaPredicted RBP21.34■■□□□ 1.01
BECN1-208ENST00000588276 NCBP3Q53F19 620 aaKnown RBP21.24■□□□□ 0.99
BECN1-208ENST00000588276 CNKSR2Q8WXI2 1034 aa21.18■□□□□ 0.98
BECN1-208ENST00000588276 DMRT2Q9Y5R5 561 aa21.07■□□□□ 0.96
BECN1-208ENST00000588276 NPM3O75607 178 aaKnown RBP20.93■□□□□ 0.94
BECN1-208ENST00000588276 RNF216Q9NWF9 866 aaPredicted RBP20.75■□□□□ 0.91
BECN1-208ENST00000588276 HOXD11P31277 338 aaPredicted RBP20.66■□□□□ 0.9
BECN1-208ENST00000588276 POTEDQ86YR6 584 aa20.59■□□□□ 0.89
BECN1-208ENST00000588276 DNAJC5BQ9UF47 199 aa20.36■□□□□ 0.85
BECN1-208ENST00000588276 SLC4A1APQ9BWU0 796 aaKnown RBP20.34■□□□□ 0.85
BECN1-208ENST00000588276 DCAF8L1A6NGE4 600 aa20.11■□□□□ 0.81
BECN1-208ENST00000588276 EHMT2Q96KQ7 1210 aa19.81■□□□□ 0.76
BECN1-208ENST00000588276 SLC4A2P04920 1241 aa19.75■□□□□ 0.75
BECN1-208ENST00000588276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.66■□□□□ 0.74
BECN1-208ENST00000588276 ZBTB22O15209 634 aa19.65■□□□□ 0.74
BECN1-208ENST00000588276 FOXD4L1Q9NU39 408 aa19.65■□□□□ 0.74
BECN1-208ENST00000588276 CSRNP3Q8WYN3 585 aa19.58■□□□□ 0.72
BECN1-208ENST00000588276 U3KPZ7 1027 aaPredicted RBP19.37■□□□□ 0.69
BECN1-208ENST00000588276 MYCNP04198 464 aaPredicted RBP19.36■□□□□ 0.69
BECN1-208ENST00000588276 RNF39Q9H2S5 420 aa19.32■□□□□ 0.68
BECN1-208ENST00000588276 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.15■□□□□ 0.66
BECN1-208ENST00000588276 HNRNPUL2Q1KMD3 747 aaKnown RBP19.15■□□□□ 0.66
BECN1-208ENST00000588276 C1QBPQ07021 282 aaKnown RBP19.09■□□□□ 0.65
BECN1-208ENST00000588276 SAMD1Q6SPF0 538 aaPredicted RBP19.08■□□□□ 0.64
BECN1-208ENST00000588276 ATXN8OSP0DMR3 200 aa18.96■□□□□ 0.63
BECN1-208ENST00000588276 APLP2Q06481 763 aa18.94■□□□□ 0.62
BECN1-208ENST00000588276 ATF5Q9Y2D1 282 aaPredicted RBP18.8■□□□□ 0.6
BECN1-208ENST00000588276 SPINK5Q9NQ38 1064 aaPredicted RBP18.79■□□□□ 0.6
BECN1-208ENST00000588276 CACNB1Q02641 598 aaPredicted RBP18.75■□□□□ 0.59
BECN1-208ENST00000588276 CAPN15O75808 1086 aa18.71■□□□□ 0.59
BECN1-208ENST00000588276 ZNF219Q9P2Y4 722 aaPredicted RBP18.67■□□□□ 0.58
BECN1-208ENST00000588276 TRHP20396 242 aaPredicted RBP18.63■□□□□ 0.57
BECN1-208ENST00000588276 DSG3P32926 999 aa18.4■□□□□ 0.54
BECN1-208ENST00000588276 ABCB7O75027 752 aa18.36■□□□□ 0.53
BECN1-208ENST00000588276 POLA2Q14181 598 aa18.34■□□□□ 0.53
BECN1-208ENST00000588276 ZBTB12Q9Y330 459 aaPredicted RBP18.08■□□□□ 0.48
BECN1-208ENST00000588276 FBLN2P98095 1184 aa18.02■□□□□ 0.48
BECN1-208ENST00000588276 MKRN4PQ13434 485 aaPredicted RBP18■□□□□ 0.47
BECN1-208ENST00000588276 OSCARQ8IYS5 282 aa17.74■□□□□ 0.43
BECN1-208ENST00000588276 FKBP8Q14318 412 aa17.69■□□□□ 0.42
BECN1-208ENST00000588276 SPDYE4A6NLX3 237 aa17.63■□□□□ 0.41
BECN1-208ENST00000588276 SPDYE2BA6NHP3 402 aa17.6■□□□□ 0.41
BECN1-208ENST00000588276 SPDYE6P0CI01 402 aa17.6■□□□□ 0.41
BECN1-208ENST00000588276 SPDYE2Q495Y8 402 aa17.6■□□□□ 0.41
BECN1-208ENST00000588276 RBM42Q9BTD8 480 aaKnown RBP17.55■□□□□ 0.4
BECN1-208ENST00000588276 ZNF692Q9BU19 519 aaPredicted RBP17.51■□□□□ 0.39
BECN1-208ENST00000588276 SSUH2Q9Y2M2 353 aa17.48■□□□□ 0.39
BECN1-208ENST00000588276 PROM2Q8N271 834 aa17.37■□□□□ 0.37
BECN1-208ENST00000588276 AKT1S1Q96B36 256 aa17.34■□□□□ 0.37
BECN1-208ENST00000588276 PABPN1Q86U42 306 aaKnown RBP eCLIP17.29■□□□□ 0.36
BECN1-208ENST00000588276 SLC24A1O60721 1099 aa17.28■□□□□ 0.36
BECN1-208ENST00000588276 RTN4Q9NQC3 1192 aaKnown RBP17.17■□□□□ 0.34
BECN1-208ENST00000588276 NISCHQ9Y2I1 1504 aa17.16■□□□□ 0.34
BECN1-208ENST00000588276 REM2Q8IYK8 340 aaPredicted RBP17.16■□□□□ 0.34
BECN1-208ENST00000588276 AMER1Q5JTC6 1135 aaPredicted RBP17.13■□□□□ 0.33
BECN1-208ENST00000588276 SPDYE1Q8NFV5 336 aaPredicted RBP17.06■□□□□ 0.32
BECN1-208ENST00000588276 FBXO3Q9UK99 471 aa17.06■□□□□ 0.32
BECN1-208ENST00000588276 STAG3Q9UJ98 1225 aa17.03■□□□□ 0.32
BECN1-208ENST00000588276 PITPNM1O00562 1244 aa16.97■□□□□ 0.31
BECN1-208ENST00000588276 CLEC11AQ9Y240 323 aa16.95■□□□□ 0.3
BECN1-208ENST00000588276 VASPP50552 380 aaPredicted RBP16.84■□□□□ 0.29
BECN1-208ENST00000588276 PRR29P0C7W0 189 aa16.82■□□□□ 0.28
BECN1-208ENST00000588276 CHRDL2Q6WN34 429 aa16.78■□□□□ 0.28
BECN1-208ENST00000588276 MIER1Q8N108 512 aa16.68■□□□□ 0.26
BECN1-208ENST00000588276 PLCD3Q8N3E9 789 aa16.68■□□□□ 0.26
BECN1-208ENST00000588276 FXR2P51116 673 aaKnown RBP eCLIP16.65■□□□□ 0.26
BECN1-208ENST00000588276 CREBZFQ9NS37 354 aa16.63■□□□□ 0.25
BECN1-208ENST00000588276 PLEKHG5O94827 1062 aa16.62■□□□□ 0.25
BECN1-208ENST00000588276 IFNLR1Q8IU57 520 aaPredicted RBP16.59■□□□□ 0.25
BECN1-208ENST00000588276 PIP4P2Q8N4L2 257 aa16.59■□□□□ 0.25
BECN1-208ENST00000588276 PRKAR2AP13861 404 aaKnown RBP16.53■□□□□ 0.24
BECN1-208ENST00000588276 CHADLQ6NUI6 762 aa16.53■□□□□ 0.24
BECN1-208ENST00000588276 ZBTB47Q9UFB7 747 aaPredicted RBP16.51■□□□□ 0.23
BECN1-208ENST00000588276 KLHL34Q8N239 644 aa16.5■□□□□ 0.23
BECN1-208ENST00000588276 MNX1P50219 401 aaPredicted RBP16.47■□□□□ 0.23
BECN1-208ENST00000588276 SPOCK2Q92563 424 aa16.4■□□□□ 0.22
BECN1-208ENST00000588276 FARP1Q9Y4F1 1045 aaPredicted RBP16.4■□□□□ 0.22
BECN1-208ENST00000588276 NPM1P06748 294 aaKnown RBP eCLIP16.36■□□□□ 0.21
BECN1-208ENST00000588276 NUBP1P53384 320 aa16.28■□□□□ 0.2
BECN1-208ENST00000588276 POTEHQ6S545 545 aa16.19■□□□□ 0.18
BECN1-208ENST00000588276 RASEFQ8IZ41 740 aa16.19■□□□□ 0.18
BECN1-208ENST00000588276 FAM212AQ96EL1 285 aa16.15■□□□□ 0.18
BECN1-208ENST00000588276 GSE1Q14687 1217 aa16.12■□□□□ 0.17
BECN1-208ENST00000588276 CIZ1Q9ULV3 898 aaPredicted RBP16.11■□□□□ 0.17
BECN1-208ENST00000588276 DCAF8Q5TAQ9 597 aa16.1■□□□□ 0.17
BECN1-208ENST00000588276 C19orf67A6NJJ6 358 aa16.07■□□□□ 0.16
BECN1-208ENST00000588276 CD44P16070 742 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms