RNA–Protein interactions for RNA: ENST00000588008.1

BCAS3-215, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

TSL 3

Gene BCAS3, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-215ENST00000588008 AEBP2Q6ZN18 517 aaPredicted RBP24.25■■□□□ 1.47
BCAS3-215ENST00000588008 CHIC1Q5VXU3 224 aa22.98■■□□□ 1.27
BCAS3-215ENST00000588008 SENP3Q9H4L4 574 aaPredicted RBP20.68■□□□□ 0.9
BCAS3-215ENST00000588008 PHF23Q9BUL5 403 aaPredicted RBP20.42■□□□□ 0.86
BCAS3-215ENST00000588008 FOXD1Q16676 465 aa19.3■□□□□ 0.68
BCAS3-215ENST00000588008 PLPPR3Q6T4P5 718 aa18.34■□□□□ 0.53
BCAS3-215ENST00000588008 MSH5O43196 834 aa18.06■□□□□ 0.48
BCAS3-215ENST00000588008 PIAS4Q8N2W9 510 aaPredicted RBP18.03■□□□□ 0.48
BCAS3-215ENST00000588008 PPP6R1Q9UPN7 881 aa18.02■□□□□ 0.48
BCAS3-215ENST00000588008 ADRA2BP18089 450 aa17.97■□□□□ 0.47
BCAS3-215ENST00000588008 POTEDQ86YR6 584 aa17.71■□□□□ 0.43
BCAS3-215ENST00000588008 MAPK8IP2Q13387 824 aaPredicted RBP16.52■□□□□ 0.24
BCAS3-215ENST00000588008 SCAF1Q9H7N4 1312 aaKnown RBP16.43■□□□□ 0.22
BCAS3-215ENST00000588008 DMRT2Q9Y5R5 561 aa16.4■□□□□ 0.22
BCAS3-215ENST00000588008 PPP4R3CPQ6ZMV5 832 aa16.09■□□□□ 0.17
BCAS3-215ENST00000588008 CNKSR2Q8WXI2 1034 aa15.78■□□□□ 0.12
BCAS3-215ENST00000588008 HOXD11P31277 338 aaPredicted RBP15.77■□□□□ 0.12
BCAS3-215ENST00000588008 DCAF8L1A6NGE4 600 aa15.76■□□□□ 0.11
BCAS3-215ENST00000588008 RNF216Q9NWF9 866 aaPredicted RBP15.64■□□□□ 0.09
BCAS3-215ENST00000588008 CACNB1Q02641 598 aaPredicted RBP15.54■□□□□ 0.08
BCAS3-215ENST00000588008 NCBP3Q53F19 620 aaKnown RBP15.45■□□□□ 0.06
BCAS3-215ENST00000588008 RNF39Q9H2S5 420 aa15.41■□□□□ 0.06
BCAS3-215ENST00000588008 NPM3O75607 178 aaKnown RBP15.23■□□□□ 0.03
BCAS3-215ENST00000588008 DNAJC5BQ9UF47 199 aa15.2■□□□□ 0.02
BCAS3-215ENST00000588008 C1QBPQ07021 282 aaKnown RBP15.18■□□□□ 0.02
BCAS3-215ENST00000588008 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.05■□□□□ -0
BCAS3-215ENST00000588008 KCNA4P22459 653 aa14.91□□□□□ -0.02
BCAS3-215ENST00000588008 U3KPZ7 1027 aaPredicted RBP14.72□□□□□ -0.05
BCAS3-215ENST00000588008 SLC4A2P04920 1241 aa14.55□□□□□ -0.08
BCAS3-215ENST00000588008 SPINK5Q9NQ38 1064 aaPredicted RBP14.53□□□□□ -0.08
BCAS3-215ENST00000588008 CAPN15O75808 1086 aa14.51□□□□□ -0.09
BCAS3-215ENST00000588008 DSG3P32926 999 aa14.42□□□□□ -0.1
BCAS3-215ENST00000588008 APLP2Q06481 763 aa14.29□□□□□ -0.12
BCAS3-215ENST00000588008 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.27□□□□□ -0.13
BCAS3-215ENST00000588008 TRHP20396 242 aaPredicted RBP14.27□□□□□ -0.13
BCAS3-215ENST00000588008 HNRNPUL2Q1KMD3 747 aaKnown RBP14.27□□□□□ -0.13
BCAS3-215ENST00000588008 ZNF219Q9P2Y4 722 aaPredicted RBP14.21□□□□□ -0.13
BCAS3-215ENST00000588008 SAMD1Q6SPF0 538 aaPredicted RBP14.19□□□□□ -0.14
BCAS3-215ENST00000588008 ABCB7O75027 752 aa14.18□□□□□ -0.14
BCAS3-215ENST00000588008 MYCNP04198 464 aaPredicted RBP14.08□□□□□ -0.16
BCAS3-215ENST00000588008 SLC4A1APQ9BWU0 796 aaKnown RBP14.06□□□□□ -0.16
BCAS3-215ENST00000588008 FOXD4L1Q9NU39 408 aa13.9□□□□□ -0.18
BCAS3-215ENST00000588008 POLA2Q14181 598 aa13.88□□□□□ -0.19
BCAS3-215ENST00000588008 POTEHQ6S545 545 aa13.87□□□□□ -0.19
BCAS3-215ENST00000588008 ATF5Q9Y2D1 282 aaPredicted RBP13.78□□□□□ -0.2
BCAS3-215ENST00000588008 RBM42Q9BTD8 480 aaKnown RBP13.75□□□□□ -0.21
BCAS3-215ENST00000588008 ZBTB22O15209 634 aa13.7□□□□□ -0.22
BCAS3-215ENST00000588008 ZBTB12Q9Y330 459 aaPredicted RBP13.57□□□□□ -0.24
BCAS3-215ENST00000588008 ATXN8OSP0DMR3 200 aa13.48□□□□□ -0.25
BCAS3-215ENST00000588008 CHRDL2Q6WN34 429 aa13.48□□□□□ -0.25
BCAS3-215ENST00000588008 OSCARQ8IYS5 282 aa13.43□□□□□ -0.26
BCAS3-215ENST00000588008 AKT1S1Q96B36 256 aa13.43□□□□□ -0.26
BCAS3-215ENST00000588008 REM2Q8IYK8 340 aaPredicted RBP13.32□□□□□ -0.28
BCAS3-215ENST00000588008 FBLN2P98095 1184 aa13.24□□□□□ -0.29
BCAS3-215ENST00000588008 PITPNM1O00562 1244 aa13.18□□□□□ -0.3
BCAS3-215ENST00000588008 PIP4P2Q8N4L2 257 aa13.16□□□□□ -0.3
BCAS3-215ENST00000588008 SPDYE2BA6NHP3 402 aa13.15□□□□□ -0.3
BCAS3-215ENST00000588008 SPDYE6P0CI01 402 aa13.15□□□□□ -0.3
BCAS3-215ENST00000588008 SPDYE2Q495Y8 402 aa13.15□□□□□ -0.3
BCAS3-215ENST00000588008 MKRN4PQ13434 485 aaPredicted RBP13.13□□□□□ -0.31
BCAS3-215ENST00000588008 FXR2P51116 673 aaKnown RBP eCLIP13.06□□□□□ -0.32
BCAS3-215ENST00000588008 CSRNP3Q8WYN3 585 aa13.03□□□□□ -0.32
BCAS3-215ENST00000588008 ZNF692Q9BU19 519 aaPredicted RBP13□□□□□ -0.33
BCAS3-215ENST00000588008 SP7Q8TDD2 431 aaPredicted RBP12.98□□□□□ -0.33
BCAS3-215ENST00000588008 SSUH2Q9Y2M2 353 aa12.96□□□□□ -0.33
BCAS3-215ENST00000588008 HAX1O00165 279 aa12.94□□□□□ -0.34
BCAS3-215ENST00000588008 SPDYE1Q8NFV5 336 aaPredicted RBP12.94□□□□□ -0.34
BCAS3-215ENST00000588008 CLEC11AQ9Y240 323 aa12.94□□□□□ -0.34
BCAS3-215ENST00000588008 EHMT2Q96KQ7 1210 aa12.87□□□□□ -0.35
BCAS3-215ENST00000588008 PRKAR2AP13861 404 aaKnown RBP12.84□□□□□ -0.35
BCAS3-215ENST00000588008 PABPN1Q86U42 306 aaKnown RBP eCLIP12.81□□□□□ -0.36
BCAS3-215ENST00000588008 EVX2Q03828 476 aa12.77□□□□□ -0.37
BCAS3-215ENST00000588008 PRR29P0C7W0 189 aa12.71□□□□□ -0.37
BCAS3-215ENST00000588008 CHADLQ6NUI6 762 aa12.69□□□□□ -0.38
BCAS3-215ENST00000588008 C19orf67A6NJJ6 358 aa12.65□□□□□ -0.38
BCAS3-215ENST00000588008 SPDYE4A6NLX3 237 aa12.5□□□□□ -0.41
BCAS3-215ENST00000588008 FARP1Q9Y4F1 1045 aaPredicted RBP12.49□□□□□ -0.41
BCAS3-215ENST00000588008 GABBR2O75899 941 aa12.47□□□□□ -0.41
BCAS3-215ENST00000588008 CD44P16070 742 aaKnown RBP12.43□□□□□ -0.42
BCAS3-215ENST00000588008 STAG3Q9UJ98 1225 aa12.43□□□□□ -0.42
BCAS3-215ENST00000588008 CREBZFQ9NS37 354 aa12.38□□□□□ -0.43
BCAS3-215ENST00000588008 ZRANB1Q9UGI0 708 aa12.25□□□□□ -0.45
BCAS3-215ENST00000588008 CLCN6P51797 869 aa12.23□□□□□ -0.45
BCAS3-215ENST00000588008 ZNF579Q8NAF0 562 aaKnown RBP12.22□□□□□ -0.45
BCAS3-215ENST00000588008 POTEIP0CG38 1075 aa12.21□□□□□ -0.45
BCAS3-215ENST00000588008 LHX8Q68G74 356 aa12.18□□□□□ -0.46
BCAS3-215ENST00000588008 PROM2Q8N271 834 aa12.16□□□□□ -0.46
BCAS3-215ENST00000588008 NPM1P06748 294 aaKnown RBP eCLIP12.15□□□□□ -0.46
BCAS3-215ENST00000588008 MNX1P50219 401 aaPredicted RBP12.15□□□□□ -0.46
BCAS3-215ENST00000588008 PAK3O75914 559 aaPredicted RBP12.14□□□□□ -0.47
BCAS3-215ENST00000588008 DCBLD2Q96PD2 775 aa12.14□□□□□ -0.47
BCAS3-215ENST00000588008 GALR2O43603 387 aaPredicted RBP12.09□□□□□ -0.47
BCAS3-215ENST00000588008 PHF12Q96QT6 1004 aa12.08□□□□□ -0.48
BCAS3-215ENST00000588008 MIER1Q8N108 512 aa11.95□□□□□ -0.5
BCAS3-215ENST00000588008 TSPYL2Q9H2G4 693 aaPredicted RBP11.95□□□□□ -0.5
BCAS3-215ENST00000588008 PLEKHG5O94827 1062 aa11.91□□□□□ -0.5
BCAS3-215ENST00000588008 MS4A3Q96HJ5 214 aa11.91□□□□□ -0.5
BCAS3-215ENST00000588008 PELP1Q8IZL8 1130 aaKnown RBP11.87□□□□□ -0.51
BCAS3-215ENST00000588008 CCDC61Q9Y6R9 512 aa11.87□□□□□ -0.51
BCAS3-215ENST00000588008 PLCD3Q8N3E9 789 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms