RNA–Protein interactions for RNA: ENST00000587878.1

ATP9B-211, Transcript of ATPase phospholipid transporting 9B (putative), humanhuman

TSL 3

Gene ATP9B, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9B-211ENST00000587878 CHIC1Q5VXU3 224 aa19.52■□□□□ 0.72
ATP9B-211ENST00000587878 AEBP2Q6ZN18 517 aaPredicted RBP19.02■□□□□ 0.64
ATP9B-211ENST00000587878 PHF23Q9BUL5 403 aaPredicted RBP17.15■□□□□ 0.34
ATP9B-211ENST00000587878 PLPPR3Q6T4P5 718 aa16.31■□□□□ 0.2
ATP9B-211ENST00000587878 SENP3Q9H4L4 574 aaPredicted RBP16.21■□□□□ 0.19
ATP9B-211ENST00000587878 ADRA2BP18089 450 aa15.04■□□□□ -0
ATP9B-211ENST00000587878 KCNA4P22459 653 aa14.93□□□□□ -0.02
ATP9B-211ENST00000587878 EHMT2Q96KQ7 1210 aa14.92□□□□□ -0.02
ATP9B-211ENST00000587878 PPP6R1Q9UPN7 881 aa14.85□□□□□ -0.03
ATP9B-211ENST00000587878 FOXD1Q16676 465 aa14.82□□□□□ -0.04
ATP9B-211ENST00000587878 SLC4A1APQ9BWU0 796 aaKnown RBP14.47□□□□□ -0.09
ATP9B-211ENST00000587878 NCBP3Q53F19 620 aaKnown RBP14.43□□□□□ -0.1
ATP9B-211ENST00000587878 PPP4R3CPQ6ZMV5 832 aa14.41□□□□□ -0.1
ATP9B-211ENST00000587878 CSRNP3Q8WYN3 585 aa14.38□□□□□ -0.11
ATP9B-211ENST00000587878 PIAS4Q8N2W9 510 aaPredicted RBP14.22□□□□□ -0.13
ATP9B-211ENST00000587878 NPM3O75607 178 aaKnown RBP14.02□□□□□ -0.17
ATP9B-211ENST00000587878 SCAF1Q9H7N4 1312 aaKnown RBP13.91□□□□□ -0.18
ATP9B-211ENST00000587878 CNKSR2Q8WXI2 1034 aa13.88□□□□□ -0.19
ATP9B-211ENST00000587878 ZBTB22O15209 634 aa13.67□□□□□ -0.22
ATP9B-211ENST00000587878 FOXD4L1Q9NU39 408 aa13.61□□□□□ -0.23
ATP9B-211ENST00000587878 DNAJC5BQ9UF47 199 aa13.61□□□□□ -0.23
ATP9B-211ENST00000587878 MSH5O43196 834 aa13.5□□□□□ -0.25
ATP9B-211ENST00000587878 SLC24A1O60721 1099 aa13.4□□□□□ -0.26
ATP9B-211ENST00000587878 AMER1Q5JTC6 1135 aaPredicted RBP13.4□□□□□ -0.26
ATP9B-211ENST00000587878 RNF216Q9NWF9 866 aaPredicted RBP13.4□□□□□ -0.26
ATP9B-211ENST00000587878 MAPK8IP2Q13387 824 aaPredicted RBP13.26□□□□□ -0.29
ATP9B-211ENST00000587878 RTN4Q9NQC3 1192 aaKnown RBP13.22□□□□□ -0.29
ATP9B-211ENST00000587878 ATXN8OSP0DMR3 200 aa13.16□□□□□ -0.3
ATP9B-211ENST00000587878 HOXD11P31277 338 aaPredicted RBP13.09□□□□□ -0.31
ATP9B-211ENST00000587878 MYCNP04198 464 aaPredicted RBP13.03□□□□□ -0.32
ATP9B-211ENST00000587878 DMRT2Q9Y5R5 561 aa13.02□□□□□ -0.33
ATP9B-211ENST00000587878 SLC4A2P04920 1241 aa12.99□□□□□ -0.33
ATP9B-211ENST00000587878 FKBP8Q14318 412 aa12.98□□□□□ -0.33
ATP9B-211ENST00000587878 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.67□□□□□ -0.38
ATP9B-211ENST00000587878 HNRNPUL2Q1KMD3 747 aaKnown RBP12.67□□□□□ -0.38
ATP9B-211ENST00000587878 SAMD1Q6SPF0 538 aaPredicted RBP12.6□□□□□ -0.39
ATP9B-211ENST00000587878 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.53□□□□□ -0.4
ATP9B-211ENST00000587878 FBXO3Q9UK99 471 aa12.48□□□□□ -0.41
ATP9B-211ENST00000587878 ATF5Q9Y2D1 282 aaPredicted RBP12.44□□□□□ -0.42
ATP9B-211ENST00000587878 DCAF8L1A6NGE4 600 aa12.43□□□□□ -0.42
ATP9B-211ENST00000587878 APLP2Q06481 763 aa12.38□□□□□ -0.43
ATP9B-211ENST00000587878 ZNF219Q9P2Y4 722 aaPredicted RBP12.3□□□□□ -0.44
ATP9B-211ENST00000587878 U3KPZ7 1027 aaPredicted RBP12.29□□□□□ -0.44
ATP9B-211ENST00000587878 PLCB2Q00722 1185 aa12.26□□□□□ -0.45
ATP9B-211ENST00000587878 SPDYE4A6NLX3 237 aa12.23□□□□□ -0.45
ATP9B-211ENST00000587878 VASPP50552 380 aaPredicted RBP12.12□□□□□ -0.47
ATP9B-211ENST00000587878 FBLN2P98095 1184 aa12.11□□□□□ -0.47
ATP9B-211ENST00000587878 HAP1P54257 671 aaPredicted RBP12.09□□□□□ -0.47
ATP9B-211ENST00000587878 PROM2Q8N271 834 aa12.09□□□□□ -0.47
ATP9B-211ENST00000587878 DCAF8L2P0C7V8 631 aa12.08□□□□□ -0.48
ATP9B-211ENST00000587878 BCANQ96GW7 911 aa12.07□□□□□ -0.48
ATP9B-211ENST00000587878 VSIG10Q8N0Z9 540 aa12.03□□□□□ -0.48
ATP9B-211ENST00000587878 IFNLR1Q8IU57 520 aaPredicted RBP11.98□□□□□ -0.49
ATP9B-211ENST00000587878 MKRN4PQ13434 485 aaPredicted RBP11.97□□□□□ -0.49
ATP9B-211ENST00000587878 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.93□□□□□ -0.5
ATP9B-211ENST00000587878 PKD2Q13563 968 aa11.88□□□□□ -0.51
ATP9B-211ENST00000587878 BBXQ8WY36 941 aaPredicted RBP11.86□□□□□ -0.51
ATP9B-211ENST00000587878 ZBTB12Q9Y330 459 aaPredicted RBP11.85□□□□□ -0.51
ATP9B-211ENST00000587878 POLA2Q14181 598 aa11.84□□□□□ -0.51
ATP9B-211ENST00000587878 TRHP20396 242 aaPredicted RBP11.83□□□□□ -0.52
ATP9B-211ENST00000587878 KLHL34Q8N239 644 aa11.82□□□□□ -0.52
ATP9B-211ENST00000587878 TAOK2Q9UL54 1235 aa11.82□□□□□ -0.52
ATP9B-211ENST00000587878 SPOCK2Q92563 424 aa11.81□□□□□ -0.52
ATP9B-211ENST00000587878 STAG3Q9UJ98 1225 aa11.76□□□□□ -0.53
ATP9B-211ENST00000587878 ECM2O94769 699 aaPredicted RBP11.75□□□□□ -0.53
ATP9B-211ENST00000587878 PAXIP1Q6ZW49 1069 aaPredicted RBP11.71□□□□□ -0.53
ATP9B-211ENST00000587878 CAPN15O75808 1086 aa11.7□□□□□ -0.54
ATP9B-211ENST00000587878 PRKCSHP14314 528 aaPredicted RBP11.7□□□□□ -0.54
ATP9B-211ENST00000587878 CFAP44Q96MT7 982 aa11.68□□□□□ -0.54
ATP9B-211ENST00000587878 SPINK5Q9NQ38 1064 aaPredicted RBP11.68□□□□□ -0.54
ATP9B-211ENST00000587878 SPRYD3Q8NCJ5 442 aa11.66□□□□□ -0.54
ATP9B-211ENST00000587878 PLCD3Q8N3E9 789 aa11.64□□□□□ -0.55
ATP9B-211ENST00000587878 KDM2AQ9Y2K7 1162 aa11.63□□□□□ -0.55
ATP9B-211ENST00000587878 TPRNQ4KMQ1 711 aa11.62□□□□□ -0.55
ATP9B-211ENST00000587878 NPM1P06748 294 aaKnown RBP eCLIP11.59□□□□□ -0.55
ATP9B-211ENST00000587878 ZNF692Q9BU19 519 aaPredicted RBP11.59□□□□□ -0.55
ATP9B-211ENST00000587878 PLEKHG5O94827 1062 aa11.58□□□□□ -0.56
ATP9B-211ENST00000587878 C1QBPQ07021 282 aaKnown RBP11.56□□□□□ -0.56
ATP9B-211ENST00000587878 MIER1Q8N108 512 aa11.56□□□□□ -0.56
ATP9B-211ENST00000587878 ZBTB47Q9UFB7 747 aaPredicted RBP11.56□□□□□ -0.56
ATP9B-211ENST00000587878 RNF39Q9H2S5 420 aa11.55□□□□□ -0.56
ATP9B-211ENST00000587878 SPDYE2BA6NHP3 402 aa11.52□□□□□ -0.57
ATP9B-211ENST00000587878 SPDYE6P0CI01 402 aa11.52□□□□□ -0.57
ATP9B-211ENST00000587878 SPDYE2Q495Y8 402 aa11.52□□□□□ -0.57
ATP9B-211ENST00000587878 RGL2O15211 777 aa11.51□□□□□ -0.57
ATP9B-211ENST00000587878 TRIM41Q8WV44 630 aa11.51□□□□□ -0.57
ATP9B-211ENST00000587878 CHGAP10645 457 aaKnown RBP11.47□□□□□ -0.57
ATP9B-211ENST00000587878 TSHZ2Q9NRE2 1034 aa11.47□□□□□ -0.57
ATP9B-211ENST00000587878 ABCB7O75027 752 aa11.46□□□□□ -0.57
ATP9B-211ENST00000587878 CIZ1Q9ULV3 898 aaPredicted RBP11.46□□□□□ -0.57
ATP9B-211ENST00000587878 NBR1Q14596 966 aa11.45□□□□□ -0.58
ATP9B-211ENST00000587878 SSUH2Q9Y2M2 353 aa11.44□□□□□ -0.58
ATP9B-211ENST00000587878 PABPN1Q86U42 306 aaKnown RBP eCLIP11.41□□□□□ -0.58
ATP9B-211ENST00000587878 DNAJC5Q9H3Z4 198 aa11.35□□□□□ -0.59
ATP9B-211ENST00000587878 HS6ST3Q8IZP7 471 aa11.34□□□□□ -0.59
ATP9B-211ENST00000587878 GSE1Q14687 1217 aa11.33□□□□□ -0.6
ATP9B-211ENST00000587878 OSCARQ8IYS5 282 aa11.32□□□□□ -0.6
ATP9B-211ENST00000587878 ERICH6Q7L0X2 663 aa11.29□□□□□ -0.6
ATP9B-211ENST00000587878 DSG3P32926 999 aa11.26□□□□□ -0.61
ATP9B-211ENST00000587878 RYDENQ9NUL5 291 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms