RNA–Protein interactions for RNA: ENST00000587353.5

SMAD2-209, Transcript of SMAD family member 2, humanhuman

TSL 3

Gene SMAD2, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD2-209ENST00000587353 AEBP2Q6ZN18 517 aaPredicted RBP20.71■□□□□ 0.91
SMAD2-209ENST00000587353 CHIC1Q5VXU3 224 aa19.43■□□□□ 0.7
SMAD2-209ENST00000587353 SENP3Q9H4L4 574 aaPredicted RBP17.81■□□□□ 0.44
SMAD2-209ENST00000587353 PHF23Q9BUL5 403 aaPredicted RBP17.5■□□□□ 0.39
SMAD2-209ENST00000587353 FOXD1Q16676 465 aa16.62■□□□□ 0.25
SMAD2-209ENST00000587353 POTEDQ86YR6 584 aa16.17■□□□□ 0.18
SMAD2-209ENST00000587353 MSH5O43196 834 aa15.78■□□□□ 0.12
SMAD2-209ENST00000587353 PIAS4Q8N2W9 510 aaPredicted RBP15.44■□□□□ 0.06
SMAD2-209ENST00000587353 PLPPR3Q6T4P5 718 aa15.19■□□□□ 0.02
SMAD2-209ENST00000587353 PPP6R1Q9UPN7 881 aa15.17■□□□□ 0.02
SMAD2-209ENST00000587353 ADRA2BP18089 450 aa15.11■□□□□ 0.01
SMAD2-209ENST00000587353 DMRT2Q9Y5R5 561 aa14.03□□□□□ -0.16
SMAD2-209ENST00000587353 MAPK8IP2Q13387 824 aaPredicted RBP14.02□□□□□ -0.17
SMAD2-209ENST00000587353 SCAF1Q9H7N4 1312 aaKnown RBP13.9□□□□□ -0.18
SMAD2-209ENST00000587353 CACNB1Q02641 598 aaPredicted RBP13.84□□□□□ -0.19
SMAD2-209ENST00000587353 DCAF8L1A6NGE4 600 aa13.53□□□□□ -0.24
SMAD2-209ENST00000587353 RNF39Q9H2S5 420 aa13.39□□□□□ -0.27
SMAD2-209ENST00000587353 HOXD11P31277 338 aaPredicted RBP13.32□□□□□ -0.28
SMAD2-209ENST00000587353 PPP4R3CPQ6ZMV5 832 aa13.25□□□□□ -0.29
SMAD2-209ENST00000587353 C1QBPQ07021 282 aaKnown RBP13.2□□□□□ -0.3
SMAD2-209ENST00000587353 CNKSR2Q8WXI2 1034 aa13.11□□□□□ -0.31
SMAD2-209ENST00000587353 RNF216Q9NWF9 866 aaPredicted RBP13.11□□□□□ -0.31
SMAD2-209ENST00000587353 DNAJC5BQ9UF47 199 aa12.97□□□□□ -0.33
SMAD2-209ENST00000587353 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.75□□□□□ -0.37
SMAD2-209ENST00000587353 NCBP3Q53F19 620 aaKnown RBP12.64□□□□□ -0.39
SMAD2-209ENST00000587353 POTEHQ6S545 545 aa12.59□□□□□ -0.39
SMAD2-209ENST00000587353 NPM3O75607 178 aaKnown RBP12.39□□□□□ -0.43
SMAD2-209ENST00000587353 CAPN15O75808 1086 aa12.38□□□□□ -0.43
SMAD2-209ENST00000587353 DSG3P32926 999 aa12.38□□□□□ -0.43
SMAD2-209ENST00000587353 U3KPZ7 1027 aaPredicted RBP12.35□□□□□ -0.43
SMAD2-209ENST00000587353 SPINK5Q9NQ38 1064 aaPredicted RBP12.33□□□□□ -0.44
SMAD2-209ENST00000587353 KCNA4P22459 653 aa12.23□□□□□ -0.45
SMAD2-209ENST00000587353 TRHP20396 242 aaPredicted RBP12.06□□□□□ -0.48
SMAD2-209ENST00000587353 APLP2Q06481 763 aa12.05□□□□□ -0.48
SMAD2-209ENST00000587353 ABCB7O75027 752 aa12.02□□□□□ -0.49
SMAD2-209ENST00000587353 ZNF219Q9P2Y4 722 aaPredicted RBP12.01□□□□□ -0.49
SMAD2-209ENST00000587353 SLC4A2P04920 1241 aa11.94□□□□□ -0.5
SMAD2-209ENST00000587353 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.92□□□□□ -0.5
SMAD2-209ENST00000587353 HNRNPUL2Q1KMD3 747 aaKnown RBP11.92□□□□□ -0.5
SMAD2-209ENST00000587353 RBM42Q9BTD8 480 aaKnown RBP11.87□□□□□ -0.51
SMAD2-209ENST00000587353 SAMD1Q6SPF0 538 aaPredicted RBP11.82□□□□□ -0.52
SMAD2-209ENST00000587353 CHRDL2Q6WN34 429 aa11.77□□□□□ -0.53
SMAD2-209ENST00000587353 SLC4A1APQ9BWU0 796 aaKnown RBP11.65□□□□□ -0.54
SMAD2-209ENST00000587353 POLA2Q14181 598 aa11.63□□□□□ -0.55
SMAD2-209ENST00000587353 SP7Q8TDD2 431 aaPredicted RBP11.58□□□□□ -0.56
SMAD2-209ENST00000587353 MYCNP04198 464 aaPredicted RBP11.49□□□□□ -0.57
SMAD2-209ENST00000587353 AKT1S1Q96B36 256 aa11.48□□□□□ -0.57
SMAD2-209ENST00000587353 FOXD4L1Q9NU39 408 aa11.41□□□□□ -0.58
SMAD2-209ENST00000587353 ZBTB12Q9Y330 459 aaPredicted RBP11.38□□□□□ -0.59
SMAD2-209ENST00000587353 REM2Q8IYK8 340 aaPredicted RBP11.37□□□□□ -0.59
SMAD2-209ENST00000587353 PIP4P2Q8N4L2 257 aa11.37□□□□□ -0.59
SMAD2-209ENST00000587353 HAX1O00165 279 aa11.35□□□□□ -0.59
SMAD2-209ENST00000587353 FXR2P51116 673 aaKnown RBP eCLIP11.24□□□□□ -0.61
SMAD2-209ENST00000587353 OSCARQ8IYS5 282 aa11.24□□□□□ -0.61
SMAD2-209ENST00000587353 ATF5Q9Y2D1 282 aaPredicted RBP11.23□□□□□ -0.61
SMAD2-209ENST00000587353 PITPNM1O00562 1244 aa11.22□□□□□ -0.61
SMAD2-209ENST00000587353 ZBTB22O15209 634 aa11.21□□□□□ -0.61
SMAD2-209ENST00000587353 EVX2Q03828 476 aa11.11□□□□□ -0.63
SMAD2-209ENST00000587353 ATXN8OSP0DMR3 200 aa11.09□□□□□ -0.63
SMAD2-209ENST00000587353 SPDYE2BA6NHP3 402 aa10.96□□□□□ -0.65
SMAD2-209ENST00000587353 SPDYE6P0CI01 402 aa10.96□□□□□ -0.65
SMAD2-209ENST00000587353 PRKAR2AP13861 404 aaKnown RBP10.96□□□□□ -0.65
SMAD2-209ENST00000587353 SPDYE2Q495Y8 402 aa10.96□□□□□ -0.65
SMAD2-209ENST00000587353 CSRNP3Q8WYN3 585 aa10.94□□□□□ -0.66
SMAD2-209ENST00000587353 EHMT2Q96KQ7 1210 aa10.92□□□□□ -0.66
SMAD2-209ENST00000587353 FBLN2P98095 1184 aa10.91□□□□□ -0.66
SMAD2-209ENST00000587353 CLEC11AQ9Y240 323 aa10.91□□□□□ -0.66
SMAD2-209ENST00000587353 SPDYE1Q8NFV5 336 aaPredicted RBP10.9□□□□□ -0.66
SMAD2-209ENST00000587353 C19orf67A6NJJ6 358 aa10.89□□□□□ -0.67
SMAD2-209ENST00000587353 LHX8Q68G74 356 aa10.88□□□□□ -0.67
SMAD2-209ENST00000587353 GABBR2O75899 941 aa10.86□□□□□ -0.67
SMAD2-209ENST00000587353 ZNF692Q9BU19 519 aaPredicted RBP10.77□□□□□ -0.69
SMAD2-209ENST00000587353 SSUH2Q9Y2M2 353 aa10.72□□□□□ -0.69
SMAD2-209ENST00000587353 CHADLQ6NUI6 762 aa10.71□□□□□ -0.69
SMAD2-209ENST00000587353 MKRN4PQ13434 485 aaPredicted RBP10.68□□□□□ -0.7
SMAD2-209ENST00000587353 PRR29P0C7W0 189 aa10.67□□□□□ -0.7
SMAD2-209ENST00000587353 POTEIP0CG38 1075 aa10.59□□□□□ -0.71
SMAD2-209ENST00000587353 CD44P16070 742 aaKnown RBP10.59□□□□□ -0.71
SMAD2-209ENST00000587353 PLSCR2Q9NRY7 297 aa10.59□□□□□ -0.71
SMAD2-209ENST00000587353 CLCN6P51797 869 aa10.58□□□□□ -0.72
SMAD2-209ENST00000587353 PABPN1Q86U42 306 aaKnown RBP eCLIP10.58□□□□□ -0.72
SMAD2-209ENST00000587353 FARP1Q9Y4F1 1045 aaPredicted RBP10.53□□□□□ -0.72
SMAD2-209ENST00000587353 DCBLD2Q96PD2 775 aa10.51□□□□□ -0.73
SMAD2-209ENST00000587353 ZNF579Q8NAF0 562 aaKnown RBP10.38□□□□□ -0.75
SMAD2-209ENST00000587353 ZRANB1Q9UGI0 708 aa10.38□□□□□ -0.75
SMAD2-209ENST00000587353 OTUD5Q96G74 571 aa10.31□□□□□ -0.76
SMAD2-209ENST00000587353 GALR2O43603 387 aaPredicted RBP10.28□□□□□ -0.76
SMAD2-209ENST00000587353 POTEMA6NI47 508 aa10.25□□□□□ -0.77
SMAD2-209ENST00000587353 CREBZFQ9NS37 354 aa10.25□□□□□ -0.77
SMAD2-209ENST00000587353 SPDYE4A6NLX3 237 aa10.24□□□□□ -0.77
SMAD2-209ENST00000587353 POTEB2H3BUK9 544 aa10.23□□□□□ -0.77
SMAD2-209ENST00000587353 STAG3Q9UJ98 1225 aa10.23□□□□□ -0.77
SMAD2-209ENST00000587353 PAK3O75914 559 aaPredicted RBP10.22□□□□□ -0.77
SMAD2-209ENST00000587353 POTEGQ6S5H5 508 aa10.2□□□□□ -0.78
SMAD2-209ENST00000587353 PCDH10Q9P2E7 1040 aa10.16□□□□□ -0.78
SMAD2-209ENST00000587353 PHF12Q96QT6 1004 aa10.15□□□□□ -0.78
SMAD2-209ENST00000587353 PELP1Q8IZL8 1130 aaKnown RBP10.12□□□□□ -0.79
SMAD2-209ENST00000587353 NPM1P06748 294 aaKnown RBP eCLIP10.11□□□□□ -0.79
SMAD2-209ENST00000587353 C7P10643 843 aa10.07□□□□□ -0.8
SMAD2-209ENST00000587353 METRNQ9UJH8 293 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms