RNA–Protein interactions for RNA: ENST00000587328.2

PIK3C3-206, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 2

Gene PIK3C3, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-206ENST00000587328 AEBP2Q6ZN18 517 aaPredicted RBP26.51■■□□□ 1.83
PIK3C3-206ENST00000587328 CHIC1Q5VXU3 224 aa24.84■■□□□ 1.57
PIK3C3-206ENST00000587328 SENP3Q9H4L4 574 aaPredicted RBP22.74■■□□□ 1.23
PIK3C3-206ENST00000587328 PHF23Q9BUL5 403 aaPredicted RBP22.35■■□□□ 1.17
PIK3C3-206ENST00000587328 FOXD1Q16676 465 aa21.21■□□□□ 0.99
PIK3C3-206ENST00000587328 POTEDQ86YR6 584 aa20.26■□□□□ 0.83
PIK3C3-206ENST00000587328 MSH5O43196 834 aa20.06■□□□□ 0.8
PIK3C3-206ENST00000587328 PIAS4Q8N2W9 510 aaPredicted RBP19.76■□□□□ 0.75
PIK3C3-206ENST00000587328 PLPPR3Q6T4P5 718 aa19.64■□□□□ 0.73
PIK3C3-206ENST00000587328 PPP6R1Q9UPN7 881 aa19.47■□□□□ 0.71
PIK3C3-206ENST00000587328 ADRA2BP18089 450 aa19.41■□□□□ 0.7
PIK3C3-206ENST00000587328 DMRT2Q9Y5R5 561 aa17.95■□□□□ 0.46
PIK3C3-206ENST00000587328 MAPK8IP2Q13387 824 aaPredicted RBP17.94■□□□□ 0.46
PIK3C3-206ENST00000587328 SCAF1Q9H7N4 1312 aaKnown RBP17.81■□□□□ 0.44
PIK3C3-206ENST00000587328 CACNB1Q02641 598 aaPredicted RBP17.47■□□□□ 0.39
PIK3C3-206ENST00000587328 DCAF8L1A6NGE4 600 aa17.28■□□□□ 0.36
PIK3C3-206ENST00000587328 PPP4R3CPQ6ZMV5 832 aa17.13■□□□□ 0.33
PIK3C3-206ENST00000587328 HOXD11P31277 338 aaPredicted RBP17.1■□□□□ 0.33
PIK3C3-206ENST00000587328 RNF39Q9H2S5 420 aa17.05■□□□□ 0.32
PIK3C3-206ENST00000587328 CNKSR2Q8WXI2 1034 aa16.92■□□□□ 0.3
PIK3C3-206ENST00000587328 RNF216Q9NWF9 866 aaPredicted RBP16.88■□□□□ 0.29
PIK3C3-206ENST00000587328 C1QBPQ07021 282 aaKnown RBP16.79■□□□□ 0.28
PIK3C3-206ENST00000587328 DNAJC5BQ9UF47 199 aa16.61■□□□□ 0.25
PIK3C3-206ENST00000587328 NCBP3Q53F19 620 aaKnown RBP16.38■□□□□ 0.21
PIK3C3-206ENST00000587328 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.34■□□□□ 0.21
PIK3C3-206ENST00000587328 NPM3O75607 178 aaKnown RBP16.11■□□□□ 0.17
PIK3C3-206ENST00000587328 U3KPZ7 1027 aaPredicted RBP15.92■□□□□ 0.14
PIK3C3-206ENST00000587328 CAPN15O75808 1086 aa15.84■□□□□ 0.13
PIK3C3-206ENST00000587328 DSG3P32926 999 aa15.82■□□□□ 0.12
PIK3C3-206ENST00000587328 POTEHQ6S545 545 aa15.82■□□□□ 0.12
PIK3C3-206ENST00000587328 SPINK5Q9NQ38 1064 aaPredicted RBP15.81■□□□□ 0.12
PIK3C3-206ENST00000587328 APLP2Q06481 763 aa15.49■□□□□ 0.07
PIK3C3-206ENST00000587328 SLC4A2P04920 1241 aa15.48■□□□□ 0.07
PIK3C3-206ENST00000587328 TRHP20396 242 aaPredicted RBP15.48■□□□□ 0.07
PIK3C3-206ENST00000587328 ZNF219Q9P2Y4 722 aaPredicted RBP15.45■□□□□ 0.06
PIK3C3-206ENST00000587328 ABCB7O75027 752 aa15.42■□□□□ 0.06
PIK3C3-206ENST00000587328 KCNA4P22459 653 aa15.42■□□□□ 0.06
PIK3C3-206ENST00000587328 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.37■□□□□ 0.05
PIK3C3-206ENST00000587328 HNRNPUL2Q1KMD3 747 aaKnown RBP15.37■□□□□ 0.05
PIK3C3-206ENST00000587328 SAMD1Q6SPF0 538 aaPredicted RBP15.25■□□□□ 0.03
PIK3C3-206ENST00000587328 RBM42Q9BTD8 480 aaKnown RBP15.15■□□□□ 0.02
PIK3C3-206ENST00000587328 CHRDL2Q6WN34 429 aa14.97□□□□□ -0.01
PIK3C3-206ENST00000587328 POLA2Q14181 598 aa14.95□□□□□ -0.02
PIK3C3-206ENST00000587328 MYCNP04198 464 aaPredicted RBP14.94□□□□□ -0.02
PIK3C3-206ENST00000587328 AKT1S1Q96B36 256 aa14.68□□□□□ -0.06
PIK3C3-206ENST00000587328 ZBTB12Q9Y330 459 aaPredicted RBP14.66□□□□□ -0.06
PIK3C3-206ENST00000587328 SP7Q8TDD2 431 aaPredicted RBP14.63□□□□□ -0.07
PIK3C3-206ENST00000587328 ATF5Q9Y2D1 282 aaPredicted RBP14.57□□□□□ -0.08
PIK3C3-206ENST00000587328 FOXD4L1Q9NU39 408 aa14.55□□□□□ -0.08
PIK3C3-206ENST00000587328 REM2Q8IYK8 340 aaPredicted RBP14.54□□□□□ -0.08
PIK3C3-206ENST00000587328 OSCARQ8IYS5 282 aa14.51□□□□□ -0.09
PIK3C3-206ENST00000587328 PIP4P2Q8N4L2 257 aa14.51□□□□□ -0.09
PIK3C3-206ENST00000587328 SLC4A1APQ9BWU0 796 aaKnown RBP14.49□□□□□ -0.09
PIK3C3-206ENST00000587328 PITPNM1O00562 1244 aa14.4□□□□□ -0.1
PIK3C3-206ENST00000587328 HAX1O00165 279 aa14.38□□□□□ -0.11
PIK3C3-206ENST00000587328 FXR2P51116 673 aaKnown RBP eCLIP14.34□□□□□ -0.11
PIK3C3-206ENST00000587328 ZBTB22O15209 634 aa14.15□□□□□ -0.14
PIK3C3-206ENST00000587328 SPDYE2BA6NHP3 402 aa14.14□□□□□ -0.15
PIK3C3-206ENST00000587328 SPDYE6P0CI01 402 aa14.14□□□□□ -0.15
PIK3C3-206ENST00000587328 SPDYE2Q495Y8 402 aa14.14□□□□□ -0.15
PIK3C3-206ENST00000587328 ATXN8OSP0DMR3 200 aa14.13□□□□□ -0.15
PIK3C3-206ENST00000587328 FBLN2P98095 1184 aa14.11□□□□□ -0.15
PIK3C3-206ENST00000587328 EVX2Q03828 476 aa14.11□□□□□ -0.15
PIK3C3-206ENST00000587328 PRKAR2AP13861 404 aaKnown RBP14.03□□□□□ -0.16
PIK3C3-206ENST00000587328 SPDYE1Q8NFV5 336 aaPredicted RBP14.01□□□□□ -0.17
PIK3C3-206ENST00000587328 CLEC11AQ9Y240 323 aa14.01□□□□□ -0.17
PIK3C3-206ENST00000587328 C19orf67A6NJJ6 358 aa13.9□□□□□ -0.18
PIK3C3-206ENST00000587328 ZNF692Q9BU19 519 aaPredicted RBP13.9□□□□□ -0.18
PIK3C3-206ENST00000587328 MKRN4PQ13434 485 aaPredicted RBP13.89□□□□□ -0.19
PIK3C3-206ENST00000587328 SSUH2Q9Y2M2 353 aa13.89□□□□□ -0.19
PIK3C3-206ENST00000587328 GABBR2O75899 941 aa13.8□□□□□ -0.2
PIK3C3-206ENST00000587328 CHADLQ6NUI6 762 aa13.75□□□□□ -0.21
PIK3C3-206ENST00000587328 PRR29P0C7W0 189 aa13.71□□□□□ -0.21
PIK3C3-206ENST00000587328 LHX8Q68G74 356 aa13.71□□□□□ -0.21
PIK3C3-206ENST00000587328 PABPN1Q86U42 306 aaKnown RBP eCLIP13.69□□□□□ -0.22
PIK3C3-206ENST00000587328 CD44P16070 742 aaKnown RBP13.57□□□□□ -0.24
PIK3C3-206ENST00000587328 FARP1Q9Y4F1 1045 aaPredicted RBP13.53□□□□□ -0.24
PIK3C3-206ENST00000587328 POTEIP0CG38 1075 aa13.48□□□□□ -0.25
PIK3C3-206ENST00000587328 CLCN6P51797 869 aa13.46□□□□□ -0.25
PIK3C3-206ENST00000587328 DCBLD2Q96PD2 775 aa13.38□□□□□ -0.27
PIK3C3-206ENST00000587328 ZNF579Q8NAF0 562 aaKnown RBP13.33□□□□□ -0.28
PIK3C3-206ENST00000587328 ZRANB1Q9UGI0 708 aa13.3□□□□□ -0.28
PIK3C3-206ENST00000587328 CREBZFQ9NS37 354 aa13.24□□□□□ -0.29
PIK3C3-206ENST00000587328 STAG3Q9UJ98 1225 aa13.23□□□□□ -0.29
PIK3C3-206ENST00000587328 PLSCR2Q9NRY7 297 aa13.21□□□□□ -0.29
PIK3C3-206ENST00000587328 GALR2O43603 387 aaPredicted RBP13.19□□□□□ -0.3
PIK3C3-206ENST00000587328 PAK3O75914 559 aaPredicted RBP13.14□□□□□ -0.31
PIK3C3-206ENST00000587328 CSRNP3Q8WYN3 585 aa13.11□□□□□ -0.31
PIK3C3-206ENST00000587328 OTUD5Q96G74 571 aa13.08□□□□□ -0.32
PIK3C3-206ENST00000587328 PHF12Q96QT6 1004 aa13.07□□□□□ -0.32
PIK3C3-206ENST00000587328 SPDYE4A6NLX3 237 aa13.06□□□□□ -0.32
PIK3C3-206ENST00000587328 POTEB2H3BUK9 544 aa13.02□□□□□ -0.33
PIK3C3-206ENST00000587328 NPM1P06748 294 aaKnown RBP eCLIP13.02□□□□□ -0.33
PIK3C3-206ENST00000587328 POTEMA6NI47 508 aa12.94□□□□□ -0.34
PIK3C3-206ENST00000587328 MNX1P50219 401 aaPredicted RBP12.94□□□□□ -0.34
PIK3C3-206ENST00000587328 PELP1Q8IZL8 1130 aaKnown RBP12.94□□□□□ -0.34
PIK3C3-206ENST00000587328 POTEGQ6S5H5 508 aa12.89□□□□□ -0.35
PIK3C3-206ENST00000587328 METRNQ9UJH8 293 aa12.89□□□□□ -0.35
PIK3C3-206ENST00000587328 ASTLQ6HA08 431 aaPredicted RBP12.88□□□□□ -0.35
PIK3C3-206ENST00000587328 MS4A3Q96HJ5 214 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms