RNA–Protein interactions for RNA: ENST00000585848.1

PEX3-203, Transcript of peroxisomal biogenesis factor 3, humanhuman

TSL 2

Gene PEX3, Length 408 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3-203ENST00000585848 AEBP2Q6ZN18 517 aaPredicted RBP28.66■■■□□ 2.18
PEX3-203ENST00000585848 CHIC1Q5VXU3 224 aa26.73■■□□□ 1.87
PEX3-203ENST00000585848 SENP3Q9H4L4 574 aaPredicted RBP24.49■■□□□ 1.51
PEX3-203ENST00000585848 PHF23Q9BUL5 403 aaPredicted RBP24.11■■□□□ 1.45
PEX3-203ENST00000585848 FOXD1Q16676 465 aa22.91■■□□□ 1.26
PEX3-203ENST00000585848 POTEDQ86YR6 584 aa22.01■■□□□ 1.11
PEX3-203ENST00000585848 MSH5O43196 834 aa21.61■■□□□ 1.05
PEX3-203ENST00000585848 PIAS4Q8N2W9 510 aaPredicted RBP21.27■■□□□ 1
PEX3-203ENST00000585848 PLPPR3Q6T4P5 718 aa21.07■□□□□ 0.96
PEX3-203ENST00000585848 PPP6R1Q9UPN7 881 aa21.05■□□□□ 0.96
PEX3-203ENST00000585848 ADRA2BP18089 450 aa20.94■□□□□ 0.94
PEX3-203ENST00000585848 MAPK8IP2Q13387 824 aaPredicted RBP19.39■□□□□ 0.69
PEX3-203ENST00000585848 DMRT2Q9Y5R5 561 aa19.35■□□□□ 0.69
PEX3-203ENST00000585848 SCAF1Q9H7N4 1312 aaKnown RBP19.11■□□□□ 0.65
PEX3-203ENST00000585848 CACNB1Q02641 598 aaPredicted RBP18.87■□□□□ 0.61
PEX3-203ENST00000585848 DCAF8L1A6NGE4 600 aa18.56■□□□□ 0.56
PEX3-203ENST00000585848 HOXD11P31277 338 aaPredicted RBP18.44■□□□□ 0.54
PEX3-203ENST00000585848 RNF39Q9H2S5 420 aa18.42■□□□□ 0.54
PEX3-203ENST00000585848 PPP4R3CPQ6ZMV5 832 aa18.41■□□□□ 0.54
PEX3-203ENST00000585848 CNKSR2Q8WXI2 1034 aa18.18■□□□□ 0.5
PEX3-203ENST00000585848 RNF216Q9NWF9 866 aaPredicted RBP18.15■□□□□ 0.5
PEX3-203ENST00000585848 C1QBPQ07021 282 aaKnown RBP18.1■□□□□ 0.49
PEX3-203ENST00000585848 DNAJC5BQ9UF47 199 aa17.9■□□□□ 0.46
PEX3-203ENST00000585848 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.55■□□□□ 0.4
PEX3-203ENST00000585848 NCBP3Q53F19 620 aaKnown RBP17.52■□□□□ 0.4
PEX3-203ENST00000585848 KCNA4P22459 653 aa17.38■□□□□ 0.37
PEX3-203ENST00000585848 NPM3O75607 178 aaKnown RBP17.31■□□□□ 0.36
PEX3-203ENST00000585848 U3KPZ7 1027 aaPredicted RBP17.15■□□□□ 0.34
PEX3-203ENST00000585848 POTEHQ6S545 545 aa17.14■□□□□ 0.33
PEX3-203ENST00000585848 DSG3P32926 999 aa17.07■□□□□ 0.32
PEX3-203ENST00000585848 SPINK5Q9NQ38 1064 aaPredicted RBP17.06■□□□□ 0.32
PEX3-203ENST00000585848 CAPN15O75808 1086 aa17.03■□□□□ 0.32
PEX3-203ENST00000585848 SLC4A2P04920 1241 aa16.67■□□□□ 0.26
PEX3-203ENST00000585848 TRHP20396 242 aaPredicted RBP16.64■□□□□ 0.25
PEX3-203ENST00000585848 ABCB7O75027 752 aa16.61■□□□□ 0.25
PEX3-203ENST00000585848 ZNF219Q9P2Y4 722 aaPredicted RBP16.57■□□□□ 0.24
PEX3-203ENST00000585848 APLP2Q06481 763 aa16.55■□□□□ 0.24
PEX3-203ENST00000585848 SLC4A1APQ9BWU0 796 aaKnown RBP16.55■□□□□ 0.24
PEX3-203ENST00000585848 EHMT2Q96KQ7 1210 aa16.51■□□□□ 0.23
PEX3-203ENST00000585848 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.43■□□□□ 0.22
PEX3-203ENST00000585848 HNRNPUL2Q1KMD3 747 aaKnown RBP16.43■□□□□ 0.22
PEX3-203ENST00000585848 SAMD1Q6SPF0 538 aaPredicted RBP16.33■□□□□ 0.2
PEX3-203ENST00000585848 RBM42Q9BTD8 480 aaKnown RBP16.27■□□□□ 0.2
PEX3-203ENST00000585848 CSRNP3Q8WYN3 585 aa16.24■□□□□ 0.19
PEX3-203ENST00000585848 CHRDL2Q6WN34 429 aa16.15■□□□□ 0.18
PEX3-203ENST00000585848 POLA2Q14181 598 aa16.08■□□□□ 0.16
PEX3-203ENST00000585848 ZBTB22O15209 634 aa16.06■□□□□ 0.16
PEX3-203ENST00000585848 MYCNP04198 464 aaPredicted RBP15.99■□□□□ 0.15
PEX3-203ENST00000585848 SP7Q8TDD2 431 aaPredicted RBP15.82■□□□□ 0.12
PEX3-203ENST00000585848 FOXD4L1Q9NU39 408 aa15.82■□□□□ 0.12
PEX3-203ENST00000585848 AKT1S1Q96B36 256 aa15.8■□□□□ 0.12
PEX3-203ENST00000585848 ATF5Q9Y2D1 282 aaPredicted RBP15.71■□□□□ 0.11
PEX3-203ENST00000585848 ZBTB12Q9Y330 459 aaPredicted RBP15.68■□□□□ 0.1
PEX3-203ENST00000585848 REM2Q8IYK8 340 aaPredicted RBP15.67■□□□□ 0.1
PEX3-203ENST00000585848 PIP4P2Q8N4L2 257 aa15.66■□□□□ 0.1
PEX3-203ENST00000585848 OSCARQ8IYS5 282 aa15.59■□□□□ 0.09
PEX3-203ENST00000585848 PITPNM1O00562 1244 aa15.51■□□□□ 0.07
PEX3-203ENST00000585848 HAX1O00165 279 aa15.5■□□□□ 0.07
PEX3-203ENST00000585848 FXR2P51116 673 aaKnown RBP eCLIP15.48■□□□□ 0.07
PEX3-203ENST00000585848 EVX2Q03828 476 aa15.31■□□□□ 0.04
PEX3-203ENST00000585848 ATXN8OSP0DMR3 200 aa15.23■□□□□ 0.03
PEX3-203ENST00000585848 SPDYE2BA6NHP3 402 aa15.16■□□□□ 0.02
PEX3-203ENST00000585848 SPDYE6P0CI01 402 aa15.16■□□□□ 0.02
PEX3-203ENST00000585848 SPDYE2Q495Y8 402 aa15.16■□□□□ 0.02
PEX3-203ENST00000585848 PRKAR2AP13861 404 aaKnown RBP15.09■□□□□ 0.01
PEX3-203ENST00000585848 FBLN2P98095 1184 aa15.07■□□□□ 0
PEX3-203ENST00000585848 SPDYE1Q8NFV5 336 aaPredicted RBP15.03■□□□□ -0
PEX3-203ENST00000585848 CLEC11AQ9Y240 323 aa15.03■□□□□ -0
PEX3-203ENST00000585848 C19orf67A6NJJ6 358 aa15.01□□□□□ -0.01
PEX3-203ENST00000585848 MKRN4PQ13434 485 aaPredicted RBP14.95□□□□□ -0.02
PEX3-203ENST00000585848 SSUH2Q9Y2M2 353 aa14.93□□□□□ -0.02
PEX3-203ENST00000585848 GABBR2O75899 941 aa14.91□□□□□ -0.02
PEX3-203ENST00000585848 ZNF692Q9BU19 519 aaPredicted RBP14.91□□□□□ -0.02
PEX3-203ENST00000585848 LHX8Q68G74 356 aa14.83□□□□□ -0.04
PEX3-203ENST00000585848 CHADLQ6NUI6 762 aa14.83□□□□□ -0.04
PEX3-203ENST00000585848 PRR29P0C7W0 189 aa14.71□□□□□ -0.05
PEX3-203ENST00000585848 PABPN1Q86U42 306 aaKnown RBP eCLIP14.67□□□□□ -0.06
PEX3-203ENST00000585848 POTEIP0CG38 1075 aa14.61□□□□□ -0.07
PEX3-203ENST00000585848 CD44P16070 742 aaKnown RBP14.58□□□□□ -0.08
PEX3-203ENST00000585848 FKBP8Q14318 412 aa14.57□□□□□ -0.08
PEX3-203ENST00000585848 FARP1Q9Y4F1 1045 aaPredicted RBP14.54□□□□□ -0.08
PEX3-203ENST00000585848 CLCN6P51797 869 aa14.46□□□□□ -0.09
PEX3-203ENST00000585848 DCBLD2Q96PD2 775 aa14.37□□□□□ -0.11
PEX3-203ENST00000585848 ZNF579Q8NAF0 562 aaKnown RBP14.34□□□□□ -0.11
PEX3-203ENST00000585848 PLSCR2Q9NRY7 297 aa14.29□□□□□ -0.12
PEX3-203ENST00000585848 ZRANB1Q9UGI0 708 aa14.29□□□□□ -0.12
PEX3-203ENST00000585848 CREBZFQ9NS37 354 aa14.25□□□□□ -0.13
PEX3-203ENST00000585848 GALR2O43603 387 aaPredicted RBP14.21□□□□□ -0.13
PEX3-203ENST00000585848 SPDYE4A6NLX3 237 aa14.19□□□□□ -0.14
PEX3-203ENST00000585848 OTUD5Q96G74 571 aa14.17□□□□□ -0.14
PEX3-203ENST00000585848 STAG3Q9UJ98 1225 aa14.14□□□□□ -0.15
PEX3-203ENST00000585848 POTEB2H3BUK9 544 aa14.13□□□□□ -0.15
PEX3-203ENST00000585848 PROM2Q8N271 834 aa14.11□□□□□ -0.15
PEX3-203ENST00000585848 PHF12Q96QT6 1004 aa14.06□□□□□ -0.16
PEX3-203ENST00000585848 PAK3O75914 559 aaPredicted RBP14.03□□□□□ -0.16
PEX3-203ENST00000585848 PELP1Q8IZL8 1130 aaKnown RBP14□□□□□ -0.17
PEX3-203ENST00000585848 POTEMA6NI47 508 aa13.98□□□□□ -0.17
PEX3-203ENST00000585848 RTN4Q9NQC3 1192 aaKnown RBP13.97□□□□□ -0.17
PEX3-203ENST00000585848 MNX1P50219 401 aaPredicted RBP13.96□□□□□ -0.17
PEX3-203ENST00000585848 NPM1P06748 294 aaKnown RBP eCLIP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms