RNA–Protein interactions for RNA: ENST00000585551.1

CHUK-202, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

TSL 3

Gene CHUK, Length 424 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-202ENST00000585551 AEBP2Q6ZN18 517 aaPredicted RBP16.97■□□□□ 0.31
CHUK-202ENST00000585551 CHIC1Q5VXU3 224 aa16.28■□□□□ 0.2
CHUK-202ENST00000585551 SENP3Q9H4L4 574 aaPredicted RBP14.65□□□□□ -0.06
CHUK-202ENST00000585551 PHF23Q9BUL5 403 aaPredicted RBP14.41□□□□□ -0.1
CHUK-202ENST00000585551 FOXD1Q16676 465 aa13.54□□□□□ -0.24
CHUK-202ENST00000585551 PLPPR3Q6T4P5 718 aa13.11□□□□□ -0.31
CHUK-202ENST00000585551 MSH5O43196 834 aa12.79□□□□□ -0.36
CHUK-202ENST00000585551 PIAS4Q8N2W9 510 aaPredicted RBP12.73□□□□□ -0.37
CHUK-202ENST00000585551 ADRA2BP18089 450 aa12.66□□□□□ -0.38
CHUK-202ENST00000585551 PPP6R1Q9UPN7 881 aa12.65□□□□□ -0.38
CHUK-202ENST00000585551 POTEDQ86YR6 584 aa12.26□□□□□ -0.45
CHUK-202ENST00000585551 SCAF1Q9H7N4 1312 aaKnown RBP11.8□□□□□ -0.52
CHUK-202ENST00000585551 MAPK8IP2Q13387 824 aaPredicted RBP11.58□□□□□ -0.56
CHUK-202ENST00000585551 DMRT2Q9Y5R5 561 aa11.57□□□□□ -0.56
CHUK-202ENST00000585551 PPP4R3CPQ6ZMV5 832 aa11.45□□□□□ -0.58
CHUK-202ENST00000585551 CNKSR2Q8WXI2 1034 aa11.27□□□□□ -0.61
CHUK-202ENST00000585551 DCAF8L1A6NGE4 600 aa11.18□□□□□ -0.62
CHUK-202ENST00000585551 HOXD11P31277 338 aaPredicted RBP11.16□□□□□ -0.62
CHUK-202ENST00000585551 NCBP3Q53F19 620 aaKnown RBP11.16□□□□□ -0.62
CHUK-202ENST00000585551 RNF216Q9NWF9 866 aaPredicted RBP11.14□□□□□ -0.63
CHUK-202ENST00000585551 CACNB1Q02641 598 aaPredicted RBP10.93□□□□□ -0.66
CHUK-202ENST00000585551 DNAJC5BQ9UF47 199 aa10.84□□□□□ -0.67
CHUK-202ENST00000585551 NPM3O75607 178 aaKnown RBP10.83□□□□□ -0.68
CHUK-202ENST00000585551 RNF39Q9H2S5 420 aa10.83□□□□□ -0.68
CHUK-202ENST00000585551 C1QBPQ07021 282 aaKnown RBP10.75□□□□□ -0.69
CHUK-202ENST00000585551 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.73□□□□□ -0.69
CHUK-202ENST00000585551 KCNA4P22459 653 aa10.64□□□□□ -0.71
CHUK-202ENST00000585551 U3KPZ7 1027 aaPredicted RBP10.38□□□□□ -0.75
CHUK-202ENST00000585551 APLP2Q06481 763 aa10.35□□□□□ -0.75
CHUK-202ENST00000585551 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.31□□□□□ -0.76
CHUK-202ENST00000585551 HNRNPUL2Q1KMD3 747 aaKnown RBP10.31□□□□□ -0.76
CHUK-202ENST00000585551 CAPN15O75808 1086 aa10.3□□□□□ -0.76
CHUK-202ENST00000585551 SLC4A2P04920 1241 aa10.28□□□□□ -0.76
CHUK-202ENST00000585551 SPINK5Q9NQ38 1064 aaPredicted RBP10.21□□□□□ -0.77
CHUK-202ENST00000585551 SAMD1Q6SPF0 538 aaPredicted RBP10.2□□□□□ -0.78
CHUK-202ENST00000585551 ZNF219Q9P2Y4 722 aaPredicted RBP10.17□□□□□ -0.78
CHUK-202ENST00000585551 DSG3P32926 999 aa10.15□□□□□ -0.78
CHUK-202ENST00000585551 SLC4A1APQ9BWU0 796 aaKnown RBP10.15□□□□□ -0.78
CHUK-202ENST00000585551 TRHP20396 242 aaPredicted RBP10.13□□□□□ -0.79
CHUK-202ENST00000585551 MYCNP04198 464 aaPredicted RBP10.1□□□□□ -0.79
CHUK-202ENST00000585551 ABCB7O75027 752 aa10□□□□□ -0.81
CHUK-202ENST00000585551 FOXD4L1Q9NU39 408 aa10□□□□□ -0.81
CHUK-202ENST00000585551 POLA2Q14181 598 aa9.86□□□□□ -0.83
CHUK-202ENST00000585551 RBM42Q9BTD8 480 aaKnown RBP9.83□□□□□ -0.84
CHUK-202ENST00000585551 ZBTB12Q9Y330 459 aaPredicted RBP9.78□□□□□ -0.84
CHUK-202ENST00000585551 ATXN8OSP0DMR3 200 aa9.74□□□□□ -0.85
CHUK-202ENST00000585551 ZBTB22O15209 634 aa9.71□□□□□ -0.86
CHUK-202ENST00000585551 ATF5Q9Y2D1 282 aaPredicted RBP9.7□□□□□ -0.86
CHUK-202ENST00000585551 POTEHQ6S545 545 aa9.67□□□□□ -0.86
CHUK-202ENST00000585551 AKT1S1Q96B36 256 aa9.56□□□□□ -0.88
CHUK-202ENST00000585551 FBLN2P98095 1184 aa9.55□□□□□ -0.88
CHUK-202ENST00000585551 CHRDL2Q6WN34 429 aa9.5□□□□□ -0.89
CHUK-202ENST00000585551 OSCARQ8IYS5 282 aa9.49□□□□□ -0.89
CHUK-202ENST00000585551 SPDYE2BA6NHP3 402 aa9.42□□□□□ -0.9
CHUK-202ENST00000585551 SPDYE6P0CI01 402 aa9.42□□□□□ -0.9
CHUK-202ENST00000585551 SPDYE2Q495Y8 402 aa9.42□□□□□ -0.9
CHUK-202ENST00000585551 REM2Q8IYK8 340 aaPredicted RBP9.42□□□□□ -0.9
CHUK-202ENST00000585551 CSRNP3Q8WYN3 585 aa9.38□□□□□ -0.91
CHUK-202ENST00000585551 EHMT2Q96KQ7 1210 aa9.33□□□□□ -0.92
CHUK-202ENST00000585551 ZNF692Q9BU19 519 aaPredicted RBP9.31□□□□□ -0.92
CHUK-202ENST00000585551 PITPNM1O00562 1244 aa9.28□□□□□ -0.92
CHUK-202ENST00000585551 MKRN4PQ13434 485 aaPredicted RBP9.28□□□□□ -0.92
CHUK-202ENST00000585551 SPDYE1Q8NFV5 336 aaPredicted RBP9.25□□□□□ -0.93
CHUK-202ENST00000585551 PIP4P2Q8N4L2 257 aa9.24□□□□□ -0.93
CHUK-202ENST00000585551 SSUH2Q9Y2M2 353 aa9.22□□□□□ -0.93
CHUK-202ENST00000585551 CLEC11AQ9Y240 323 aa9.21□□□□□ -0.94
CHUK-202ENST00000585551 FXR2P51116 673 aaKnown RBP eCLIP9.2□□□□□ -0.94
CHUK-202ENST00000585551 HAX1O00165 279 aa9.14□□□□□ -0.95
CHUK-202ENST00000585551 PABPN1Q86U42 306 aaKnown RBP eCLIP9.14□□□□□ -0.95
CHUK-202ENST00000585551 PRR29P0C7W0 189 aa9.1□□□□□ -0.95
CHUK-202ENST00000585551 PRKAR2AP13861 404 aaKnown RBP9.09□□□□□ -0.95
CHUK-202ENST00000585551 SP7Q8TDD2 431 aaPredicted RBP9.09□□□□□ -0.95
CHUK-202ENST00000585551 STAG3Q9UJ98 1225 aa9.02□□□□□ -0.97
CHUK-202ENST00000585551 SPDYE4A6NLX3 237 aa8.99□□□□□ -0.97
CHUK-202ENST00000585551 CHADLQ6NUI6 762 aa8.95□□□□□ -0.98
CHUK-202ENST00000585551 C19orf67A6NJJ6 358 aa8.91□□□□□ -0.98
CHUK-202ENST00000585551 FARP1Q9Y4F1 1045 aaPredicted RBP8.87□□□□□ -0.99
CHUK-202ENST00000585551 EVX2Q03828 476 aa8.86□□□□□ -0.99
CHUK-202ENST00000585551 CLCN6P51797 869 aa8.82□□□□□ -1
CHUK-202ENST00000585551 CD44P16070 742 aaKnown RBP8.81□□□□□ -1
CHUK-202ENST00000585551 NPM1P06748 294 aaKnown RBP eCLIP8.78□□□□□ -1
CHUK-202ENST00000585551 GABBR2O75899 941 aa8.77□□□□□ -1.01
CHUK-202ENST00000585551 CREBZFQ9NS37 354 aa8.77□□□□□ -1.01
CHUK-202ENST00000585551 PAK3O75914 559 aaPredicted RBP8.76□□□□□ -1.01
CHUK-202ENST00000585551 PLEKHG5O94827 1062 aa8.73□□□□□ -1.01
CHUK-202ENST00000585551 ZRANB1Q9UGI0 708 aa8.71□□□□□ -1.02
CHUK-202ENST00000585551 PROM2Q8N271 834 aa8.69□□□□□ -1.02
CHUK-202ENST00000585551 ZNF579Q8NAF0 562 aaKnown RBP8.66□□□□□ -1.02
CHUK-202ENST00000585551 DCBLD2Q96PD2 775 aa8.65□□□□□ -1.02
CHUK-202ENST00000585551 MIER1Q8N108 512 aa8.62□□□□□ -1.03
CHUK-202ENST00000585551 MNX1P50219 401 aaPredicted RBP8.59□□□□□ -1.03
CHUK-202ENST00000585551 PLCD3Q8N3E9 789 aa8.58□□□□□ -1.04
CHUK-202ENST00000585551 ZBTB47Q9UFB7 747 aaPredicted RBP8.58□□□□□ -1.04
CHUK-202ENST00000585551 FKBP8Q14318 412 aa8.57□□□□□ -1.04
CHUK-202ENST00000585551 LHX8Q68G74 356 aa8.55□□□□□ -1.04
CHUK-202ENST00000585551 PHF12Q96QT6 1004 aa8.52□□□□□ -1.05
CHUK-202ENST00000585551 TSPYL2Q9H2G4 693 aaPredicted RBP8.52□□□□□ -1.05
CHUK-202ENST00000585551 FBXO3Q9UK99 471 aa8.51□□□□□ -1.05
CHUK-202ENST00000585551 GALR2O43603 387 aaPredicted RBP8.5□□□□□ -1.05
CHUK-202ENST00000585551 POTEIP0CG38 1075 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms