RNA–Protein interactions for RNA: ENST00000585279.1

LINC00909-204, long intergenic non-protein coding RNA 909, humanhuman

TSL 3

Gene LINC00909, Length 756 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00909-204ENST00000585279 AEBP2Q6ZN18 517 aaPredicted RBP22.83■■□□□ 1.25
LINC00909-204ENST00000585279 CHIC1Q5VXU3 224 aa21.97■■□□□ 1.11
LINC00909-204ENST00000585279 PHF23Q9BUL5 403 aaPredicted RBP19.34■□□□□ 0.69
LINC00909-204ENST00000585279 SENP3Q9H4L4 574 aaPredicted RBP19.34■□□□□ 0.69
LINC00909-204ENST00000585279 FOXD1Q16676 465 aa18.04■□□□□ 0.48
LINC00909-204ENST00000585279 PLPPR3Q6T4P5 718 aa17.67■□□□□ 0.42
LINC00909-204ENST00000585279 PPP6R1Q9UPN7 881 aa17.17■□□□□ 0.34
LINC00909-204ENST00000585279 ADRA2BP18089 450 aa17.12■□□□□ 0.33
LINC00909-204ENST00000585279 PIAS4Q8N2W9 510 aaPredicted RBP16.9■□□□□ 0.3
LINC00909-204ENST00000585279 MSH5O43196 834 aa16.69■□□□□ 0.26
LINC00909-204ENST00000585279 POTEDQ86YR6 584 aa16.34■□□□□ 0.21
LINC00909-204ENST00000585279 MAPK8IP2Q13387 824 aaPredicted RBP15.65■□□□□ 0.1
LINC00909-204ENST00000585279 SCAF1Q9H7N4 1312 aaKnown RBP15.58■□□□□ 0.08
LINC00909-204ENST00000585279 PPP4R3CPQ6ZMV5 832 aa15.57■□□□□ 0.08
LINC00909-204ENST00000585279 DMRT2Q9Y5R5 561 aa15.42■□□□□ 0.06
LINC00909-204ENST00000585279 CNKSR2Q8WXI2 1034 aa15.17■□□□□ 0.02
LINC00909-204ENST00000585279 NCBP3Q53F19 620 aaKnown RBP15.02■□□□□ -0
LINC00909-204ENST00000585279 HOXD11P31277 338 aaPredicted RBP14.98□□□□□ -0.01
LINC00909-204ENST00000585279 RNF216Q9NWF9 866 aaPredicted RBP14.95□□□□□ -0.02
LINC00909-204ENST00000585279 KCNA4P22459 653 aa14.89□□□□□ -0.03
LINC00909-204ENST00000585279 NPM3O75607 178 aaKnown RBP14.86□□□□□ -0.03
LINC00909-204ENST00000585279 DCAF8L1A6NGE4 600 aa14.76□□□□□ -0.05
LINC00909-204ENST00000585279 DNAJC5BQ9UF47 199 aa14.44□□□□□ -0.1
LINC00909-204ENST00000585279 RNF39Q9H2S5 420 aa14.31□□□□□ -0.12
LINC00909-204ENST00000585279 CACNB1Q02641 598 aaPredicted RBP14.3□□□□□ -0.12
LINC00909-204ENST00000585279 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.27□□□□□ -0.13
LINC00909-204ENST00000585279 SLC4A2P04920 1241 aa14.13□□□□□ -0.15
LINC00909-204ENST00000585279 C1QBPQ07021 282 aaKnown RBP14.1□□□□□ -0.15
LINC00909-204ENST00000585279 SLC4A1APQ9BWU0 796 aaKnown RBP14.1□□□□□ -0.15
LINC00909-204ENST00000585279 U3KPZ7 1027 aaPredicted RBP14.03□□□□□ -0.16
LINC00909-204ENST00000585279 FOXD4L1Q9NU39 408 aa13.75□□□□□ -0.21
LINC00909-204ENST00000585279 SPINK5Q9NQ38 1064 aaPredicted RBP13.74□□□□□ -0.21
LINC00909-204ENST00000585279 ZBTB22O15209 634 aa13.73□□□□□ -0.21
LINC00909-204ENST00000585279 MYCNP04198 464 aaPredicted RBP13.69□□□□□ -0.22
LINC00909-204ENST00000585279 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.68□□□□□ -0.22
LINC00909-204ENST00000585279 HNRNPUL2Q1KMD3 747 aaKnown RBP13.68□□□□□ -0.22
LINC00909-204ENST00000585279 CAPN15O75808 1086 aa13.66□□□□□ -0.22
LINC00909-204ENST00000585279 SAMD1Q6SPF0 538 aaPredicted RBP13.64□□□□□ -0.23
LINC00909-204ENST00000585279 APLP2Q06481 763 aa13.57□□□□□ -0.24
LINC00909-204ENST00000585279 TRHP20396 242 aaPredicted RBP13.54□□□□□ -0.24
LINC00909-204ENST00000585279 DSG3P32926 999 aa13.52□□□□□ -0.25
LINC00909-204ENST00000585279 ZNF219Q9P2Y4 722 aaPredicted RBP13.47□□□□□ -0.25
LINC00909-204ENST00000585279 ATF5Q9Y2D1 282 aaPredicted RBP13.43□□□□□ -0.26
LINC00909-204ENST00000585279 ABCB7O75027 752 aa13.4□□□□□ -0.26
LINC00909-204ENST00000585279 CSRNP3Q8WYN3 585 aa13.39□□□□□ -0.27
LINC00909-204ENST00000585279 EHMT2Q96KQ7 1210 aa13.37□□□□□ -0.27
LINC00909-204ENST00000585279 ATXN8OSP0DMR3 200 aa13.28□□□□□ -0.28
LINC00909-204ENST00000585279 POLA2Q14181 598 aa13.27□□□□□ -0.29
LINC00909-204ENST00000585279 ZBTB12Q9Y330 459 aaPredicted RBP12.94□□□□□ -0.34
LINC00909-204ENST00000585279 RBM42Q9BTD8 480 aaKnown RBP12.83□□□□□ -0.36
LINC00909-204ENST00000585279 MKRN4PQ13434 485 aaPredicted RBP12.82□□□□□ -0.36
LINC00909-204ENST00000585279 OSCARQ8IYS5 282 aa12.81□□□□□ -0.36
LINC00909-204ENST00000585279 FBLN2P98095 1184 aa12.8□□□□□ -0.36
LINC00909-204ENST00000585279 POTEHQ6S545 545 aa12.8□□□□□ -0.36
LINC00909-204ENST00000585279 AKT1S1Q96B36 256 aa12.64□□□□□ -0.39
LINC00909-204ENST00000585279 SPDYE2BA6NHP3 402 aa12.61□□□□□ -0.39
LINC00909-204ENST00000585279 SPDYE6P0CI01 402 aa12.61□□□□□ -0.39
LINC00909-204ENST00000585279 SPDYE2Q495Y8 402 aa12.61□□□□□ -0.39
LINC00909-204ENST00000585279 REM2Q8IYK8 340 aaPredicted RBP12.55□□□□□ -0.4
LINC00909-204ENST00000585279 ZNF692Q9BU19 519 aaPredicted RBP12.53□□□□□ -0.4
LINC00909-204ENST00000585279 SSUH2Q9Y2M2 353 aa12.5□□□□□ -0.41
LINC00909-204ENST00000585279 CHRDL2Q6WN34 429 aa12.46□□□□□ -0.41
LINC00909-204ENST00000585279 PITPNM1O00562 1244 aa12.41□□□□□ -0.42
LINC00909-204ENST00000585279 PABPN1Q86U42 306 aaKnown RBP eCLIP12.37□□□□□ -0.43
LINC00909-204ENST00000585279 SPDYE4A6NLX3 237 aa12.35□□□□□ -0.43
LINC00909-204ENST00000585279 SPDYE1Q8NFV5 336 aaPredicted RBP12.3□□□□□ -0.44
LINC00909-204ENST00000585279 CLEC11AQ9Y240 323 aa12.28□□□□□ -0.44
LINC00909-204ENST00000585279 PIP4P2Q8N4L2 257 aa12.26□□□□□ -0.45
LINC00909-204ENST00000585279 FXR2P51116 673 aaKnown RBP eCLIP12.24□□□□□ -0.45
LINC00909-204ENST00000585279 PRR29P0C7W0 189 aa12.13□□□□□ -0.47
LINC00909-204ENST00000585279 PROM2Q8N271 834 aa12.11□□□□□ -0.47
LINC00909-204ENST00000585279 FKBP8Q14318 412 aa12.09□□□□□ -0.47
LINC00909-204ENST00000585279 PRKAR2AP13861 404 aaKnown RBP12.08□□□□□ -0.48
LINC00909-204ENST00000585279 STAG3Q9UJ98 1225 aa12.06□□□□□ -0.48
LINC00909-204ENST00000585279 CHADLQ6NUI6 762 aa12.04□□□□□ -0.48
LINC00909-204ENST00000585279 SP7Q8TDD2 431 aaPredicted RBP11.94□□□□□ -0.5
LINC00909-204ENST00000585279 HAX1O00165 279 aa11.93□□□□□ -0.5
LINC00909-204ENST00000585279 CREBZFQ9NS37 354 aa11.93□□□□□ -0.5
LINC00909-204ENST00000585279 FARP1Q9Y4F1 1045 aaPredicted RBP11.89□□□□□ -0.51
LINC00909-204ENST00000585279 EVX2Q03828 476 aa11.87□□□□□ -0.51
LINC00909-204ENST00000585279 C19orf67A6NJJ6 358 aa11.83□□□□□ -0.52
LINC00909-204ENST00000585279 MNX1P50219 401 aaPredicted RBP11.78□□□□□ -0.52
LINC00909-204ENST00000585279 MIER1Q8N108 512 aa11.75□□□□□ -0.53
LINC00909-204ENST00000585279 CD44P16070 742 aaKnown RBP11.71□□□□□ -0.53
LINC00909-204ENST00000585279 FBXO3Q9UK99 471 aa11.69□□□□□ -0.54
LINC00909-204ENST00000585279 PLCD3Q8N3E9 789 aa11.68□□□□□ -0.54
LINC00909-204ENST00000585279 NPM1P06748 294 aaKnown RBP eCLIP11.67□□□□□ -0.54
LINC00909-204ENST00000585279 PLEKHG5O94827 1062 aa11.64□□□□□ -0.55
LINC00909-204ENST00000585279 ZRANB1Q9UGI0 708 aa11.61□□□□□ -0.55
LINC00909-204ENST00000585279 GABBR2O75899 941 aa11.58□□□□□ -0.56
LINC00909-204ENST00000585279 VASPP50552 380 aaPredicted RBP11.58□□□□□ -0.56
LINC00909-204ENST00000585279 ZNF579Q8NAF0 562 aaKnown RBP11.54□□□□□ -0.56
LINC00909-204ENST00000585279 PAK3O75914 559 aaPredicted RBP11.53□□□□□ -0.56
LINC00909-204ENST00000585279 RASEFQ8IZ41 740 aa11.52□□□□□ -0.57
LINC00909-204ENST00000585279 TSPYL2Q9H2G4 693 aaPredicted RBP11.52□□□□□ -0.57
LINC00909-204ENST00000585279 ZBTB47Q9UFB7 747 aaPredicted RBP11.52□□□□□ -0.57
LINC00909-204ENST00000585279 NUBP1P53384 320 aa11.5□□□□□ -0.57
LINC00909-204ENST00000585279 PHF12Q96QT6 1004 aa11.5□□□□□ -0.57
LINC00909-204ENST00000585279 KLHL34Q8N239 644 aa11.45□□□□□ -0.58
LINC00909-204ENST00000585279 CCDC61Q9Y6R9 512 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms