RNA–Protein interactions for RNA: ENST00000584804.1

RAD51C-217, Transcript of RAD51 paralog C, humanhuman

TSL 3

Gene RAD51C, Length 474 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51C-217ENST00000584804 AEBP2Q6ZN18 517 aaPredicted RBP22.78■■□□□ 1.24
RAD51C-217ENST00000584804 CHIC1Q5VXU3 224 aa21.28■■□□□ 1
RAD51C-217ENST00000584804 SENP3Q9H4L4 574 aaPredicted RBP19.48■□□□□ 0.71
RAD51C-217ENST00000584804 PHF23Q9BUL5 403 aaPredicted RBP19.19■□□□□ 0.66
RAD51C-217ENST00000584804 FOXD1Q16676 465 aa18.21■□□□□ 0.51
RAD51C-217ENST00000584804 POTEDQ86YR6 584 aa17.35■□□□□ 0.37
RAD51C-217ENST00000584804 MSH5O43196 834 aa17.16■□□□□ 0.34
RAD51C-217ENST00000584804 PIAS4Q8N2W9 510 aaPredicted RBP16.95■□□□□ 0.3
RAD51C-217ENST00000584804 PLPPR3Q6T4P5 718 aa16.85■□□□□ 0.29
RAD51C-217ENST00000584804 PPP6R1Q9UPN7 881 aa16.77■□□□□ 0.28
RAD51C-217ENST00000584804 ADRA2BP18089 450 aa16.71■□□□□ 0.27
RAD51C-217ENST00000584804 MAPK8IP2Q13387 824 aaPredicted RBP15.45■□□□□ 0.06
RAD51C-217ENST00000584804 DMRT2Q9Y5R5 561 aa15.39■□□□□ 0.05
RAD51C-217ENST00000584804 SCAF1Q9H7N4 1312 aaKnown RBP15.26■□□□□ 0.03
RAD51C-217ENST00000584804 CACNB1Q02641 598 aaPredicted RBP14.97□□□□□ -0.01
RAD51C-217ENST00000584804 DCAF8L1A6NGE4 600 aa14.85□□□□□ -0.03
RAD51C-217ENST00000584804 PPP4R3CPQ6ZMV5 832 aa14.74□□□□□ -0.05
RAD51C-217ENST00000584804 HOXD11P31277 338 aaPredicted RBP14.67□□□□□ -0.06
RAD51C-217ENST00000584804 RNF39Q9H2S5 420 aa14.61□□□□□ -0.07
RAD51C-217ENST00000584804 CNKSR2Q8WXI2 1034 aa14.53□□□□□ -0.08
RAD51C-217ENST00000584804 RNF216Q9NWF9 866 aaPredicted RBP14.48□□□□□ -0.09
RAD51C-217ENST00000584804 C1QBPQ07021 282 aaKnown RBP14.37□□□□□ -0.11
RAD51C-217ENST00000584804 DNAJC5BQ9UF47 199 aa14.19□□□□□ -0.14
RAD51C-217ENST00000584804 NCBP3Q53F19 620 aaKnown RBP14.06□□□□□ -0.16
RAD51C-217ENST00000584804 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.04□□□□□ -0.16
RAD51C-217ENST00000584804 NPM3O75607 178 aaKnown RBP13.86□□□□□ -0.19
RAD51C-217ENST00000584804 U3KPZ7 1027 aaPredicted RBP13.67□□□□□ -0.22
RAD51C-217ENST00000584804 CAPN15O75808 1086 aa13.6□□□□□ -0.23
RAD51C-217ENST00000584804 SPINK5Q9NQ38 1064 aaPredicted RBP13.6□□□□□ -0.23
RAD51C-217ENST00000584804 DSG3P32926 999 aa13.57□□□□□ -0.24
RAD51C-217ENST00000584804 POTEHQ6S545 545 aa13.54□□□□□ -0.24
RAD51C-217ENST00000584804 SLC4A2P04920 1241 aa13.32□□□□□ -0.28
RAD51C-217ENST00000584804 TRHP20396 242 aaPredicted RBP13.31□□□□□ -0.28
RAD51C-217ENST00000584804 KCNA4P22459 653 aa13.31□□□□□ -0.28
RAD51C-217ENST00000584804 ABCB7O75027 752 aa13.27□□□□□ -0.29
RAD51C-217ENST00000584804 APLP2Q06481 763 aa13.24□□□□□ -0.29
RAD51C-217ENST00000584804 ZNF219Q9P2Y4 722 aaPredicted RBP13.23□□□□□ -0.29
RAD51C-217ENST00000584804 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.15□□□□□ -0.3
RAD51C-217ENST00000584804 HNRNPUL2Q1KMD3 747 aaKnown RBP13.15□□□□□ -0.3
RAD51C-217ENST00000584804 SAMD1Q6SPF0 538 aaPredicted RBP13.07□□□□□ -0.32
RAD51C-217ENST00000584804 RBM42Q9BTD8 480 aaKnown RBP12.95□□□□□ -0.34
RAD51C-217ENST00000584804 POLA2Q14181 598 aa12.86□□□□□ -0.35
RAD51C-217ENST00000584804 CHRDL2Q6WN34 429 aa12.83□□□□□ -0.36
RAD51C-217ENST00000584804 MYCNP04198 464 aaPredicted RBP12.82□□□□□ -0.36
RAD51C-217ENST00000584804 AKT1S1Q96B36 256 aa12.58□□□□□ -0.4
RAD51C-217ENST00000584804 ATF5Q9Y2D1 282 aaPredicted RBP12.58□□□□□ -0.4
RAD51C-217ENST00000584804 ZBTB12Q9Y330 459 aaPredicted RBP12.55□□□□□ -0.4
RAD51C-217ENST00000584804 SP7Q8TDD2 431 aaPredicted RBP12.53□□□□□ -0.4
RAD51C-217ENST00000584804 FOXD4L1Q9NU39 408 aa12.5□□□□□ -0.41
RAD51C-217ENST00000584804 REM2Q8IYK8 340 aaPredicted RBP12.49□□□□□ -0.41
RAD51C-217ENST00000584804 SLC4A1APQ9BWU0 796 aaKnown RBP12.49□□□□□ -0.41
RAD51C-217ENST00000584804 OSCARQ8IYS5 282 aa12.47□□□□□ -0.41
RAD51C-217ENST00000584804 PIP4P2Q8N4L2 257 aa12.45□□□□□ -0.42
RAD51C-217ENST00000584804 PITPNM1O00562 1244 aa12.36□□□□□ -0.43
RAD51C-217ENST00000584804 HAX1O00165 279 aa12.34□□□□□ -0.43
RAD51C-217ENST00000584804 FXR2P51116 673 aaKnown RBP eCLIP12.29□□□□□ -0.44
RAD51C-217ENST00000584804 ZBTB22O15209 634 aa12.22□□□□□ -0.45
RAD51C-217ENST00000584804 EVX2Q03828 476 aa12.14□□□□□ -0.47
RAD51C-217ENST00000584804 ATXN8OSP0DMR3 200 aa12.13□□□□□ -0.47
RAD51C-217ENST00000584804 SPDYE2BA6NHP3 402 aa12.12□□□□□ -0.47
RAD51C-217ENST00000584804 SPDYE6P0CI01 402 aa12.12□□□□□ -0.47
RAD51C-217ENST00000584804 SPDYE2Q495Y8 402 aa12.12□□□□□ -0.47
RAD51C-217ENST00000584804 FBLN2P98095 1184 aa12.11□□□□□ -0.47
RAD51C-217ENST00000584804 CLEC11AQ9Y240 323 aa12.05□□□□□ -0.48
RAD51C-217ENST00000584804 PRKAR2AP13861 404 aaKnown RBP12.04□□□□□ -0.48
RAD51C-217ENST00000584804 SPDYE1Q8NFV5 336 aaPredicted RBP12.01□□□□□ -0.49
RAD51C-217ENST00000584804 MKRN4PQ13434 485 aaPredicted RBP11.96□□□□□ -0.49
RAD51C-217ENST00000584804 ZNF692Q9BU19 519 aaPredicted RBP11.95□□□□□ -0.5
RAD51C-217ENST00000584804 C19orf67A6NJJ6 358 aa11.92□□□□□ -0.5
RAD51C-217ENST00000584804 SSUH2Q9Y2M2 353 aa11.92□□□□□ -0.5
RAD51C-217ENST00000584804 GABBR2O75899 941 aa11.84□□□□□ -0.51
RAD51C-217ENST00000584804 CHADLQ6NUI6 762 aa11.84□□□□□ -0.51
RAD51C-217ENST00000584804 PRR29P0C7W0 189 aa11.78□□□□□ -0.52
RAD51C-217ENST00000584804 PABPN1Q86U42 306 aaKnown RBP eCLIP11.77□□□□□ -0.53
RAD51C-217ENST00000584804 LHX8Q68G74 356 aa11.75□□□□□ -0.53
RAD51C-217ENST00000584804 CD44P16070 742 aaKnown RBP11.64□□□□□ -0.55
RAD51C-217ENST00000584804 FARP1Q9Y4F1 1045 aaPredicted RBP11.61□□□□□ -0.55
RAD51C-217ENST00000584804 POTEIP0CG38 1075 aa11.58□□□□□ -0.56
RAD51C-217ENST00000584804 CLCN6P51797 869 aa11.49□□□□□ -0.57
RAD51C-217ENST00000584804 DCBLD2Q96PD2 775 aa11.48□□□□□ -0.57
RAD51C-217ENST00000584804 ZRANB1Q9UGI0 708 aa11.43□□□□□ -0.58
RAD51C-217ENST00000584804 ZNF579Q8NAF0 562 aaKnown RBP11.42□□□□□ -0.58
RAD51C-217ENST00000584804 CREBZFQ9NS37 354 aa11.39□□□□□ -0.59
RAD51C-217ENST00000584804 STAG3Q9UJ98 1225 aa11.34□□□□□ -0.59
RAD51C-217ENST00000584804 GALR2O43603 387 aaPredicted RBP11.33□□□□□ -0.6
RAD51C-217ENST00000584804 CSRNP3Q8WYN3 585 aa11.33□□□□□ -0.6
RAD51C-217ENST00000584804 PLSCR2Q9NRY7 297 aa11.33□□□□□ -0.6
RAD51C-217ENST00000584804 PAK3O75914 559 aaPredicted RBP11.26□□□□□ -0.61
RAD51C-217ENST00000584804 SPDYE4A6NLX3 237 aa11.24□□□□□ -0.61
RAD51C-217ENST00000584804 PHF12Q96QT6 1004 aa11.24□□□□□ -0.61
RAD51C-217ENST00000584804 OTUD5Q96G74 571 aa11.23□□□□□ -0.61
RAD51C-217ENST00000584804 POTEB2H3BUK9 544 aa11.2□□□□□ -0.62
RAD51C-217ENST00000584804 NPM1P06748 294 aaKnown RBP eCLIP11.17□□□□□ -0.62
RAD51C-217ENST00000584804 PELP1Q8IZL8 1130 aaKnown RBP11.14□□□□□ -0.63
RAD51C-217ENST00000584804 MNX1P50219 401 aaPredicted RBP11.13□□□□□ -0.63
RAD51C-217ENST00000584804 POTEMA6NI47 508 aa11.09□□□□□ -0.63
RAD51C-217ENST00000584804 MS4A3Q96HJ5 214 aa11.07□□□□□ -0.64
RAD51C-217ENST00000584804 METRNQ9UJH8 293 aa11.06□□□□□ -0.64
RAD51C-217ENST00000584804 POTEGQ6S5H5 508 aa11.05□□□□□ -0.64
RAD51C-217ENST00000584804 EHMT2Q96KQ7 1210 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms