RNA–Protein interactions for RNA: ENST00000583696.1

GAREM1-204, Transcript of GRB2 associated regulator of MAPK1 subtype 1, humanhuman

TSL 3

Gene GAREM1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM1-204ENST00000583696 AEBP2Q6ZN18 517 aaPredicted RBP29.73■■■□□ 2.35
GAREM1-204ENST00000583696 CHIC1Q5VXU3 224 aa29.16■■■□□ 2.26
GAREM1-204ENST00000583696 PHF23Q9BUL5 403 aaPredicted RBP25.62■■□□□ 1.69
GAREM1-204ENST00000583696 SENP3Q9H4L4 574 aaPredicted RBP25.28■■□□□ 1.64
GAREM1-204ENST00000583696 PLPPR3Q6T4P5 718 aa23.74■■□□□ 1.39
GAREM1-204ENST00000583696 FOXD1Q16676 465 aa23.4■■□□□ 1.34
GAREM1-204ENST00000583696 PPP6R1Q9UPN7 881 aa22.55■■□□□ 1.2
GAREM1-204ENST00000583696 ADRA2BP18089 450 aa22.54■■□□□ 1.2
GAREM1-204ENST00000583696 PIAS4Q8N2W9 510 aaPredicted RBP22.12■■□□□ 1.13
GAREM1-204ENST00000583696 MSH5O43196 834 aa21.61■■□□□ 1.05
GAREM1-204ENST00000583696 PPP4R3CPQ6ZMV5 832 aa20.89■□□□□ 0.93
GAREM1-204ENST00000583696 SCAF1Q9H7N4 1312 aaKnown RBP20.7■□□□□ 0.9
GAREM1-204ENST00000583696 KCNA4P22459 653 aa20.49■□□□□ 0.87
GAREM1-204ENST00000583696 NCBP3Q53F19 620 aaKnown RBP20.41■□□□□ 0.86
GAREM1-204ENST00000583696 MAPK8IP2Q13387 824 aaPredicted RBP20.4■□□□□ 0.86
GAREM1-204ENST00000583696 CNKSR2Q8WXI2 1034 aa20.32■□□□□ 0.84
GAREM1-204ENST00000583696 DMRT2Q9Y5R5 561 aa20.18■□□□□ 0.82
GAREM1-204ENST00000583696 NPM3O75607 178 aaKnown RBP20.08■□□□□ 0.81
GAREM1-204ENST00000583696 RNF216Q9NWF9 866 aaPredicted RBP19.91■□□□□ 0.78
GAREM1-204ENST00000583696 HOXD11P31277 338 aaPredicted RBP19.8■□□□□ 0.76
GAREM1-204ENST00000583696 SLC4A1APQ9BWU0 796 aaKnown RBP19.55■□□□□ 0.72
GAREM1-204ENST00000583696 DNAJC5BQ9UF47 199 aa19.55■□□□□ 0.72
GAREM1-204ENST00000583696 POTEDQ86YR6 584 aa19.48■□□□□ 0.71
GAREM1-204ENST00000583696 DCAF8L1A6NGE4 600 aa19.27■□□□□ 0.68
GAREM1-204ENST00000583696 EHMT2Q96KQ7 1210 aa19.07■□□□□ 0.64
GAREM1-204ENST00000583696 SLC4A2P04920 1241 aa18.92■□□□□ 0.62
GAREM1-204ENST00000583696 FOXD4L1Q9NU39 408 aa18.89■□□□□ 0.61
GAREM1-204ENST00000583696 ZBTB22O15209 634 aa18.85■□□□□ 0.61
GAREM1-204ENST00000583696 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.85■□□□□ 0.61
GAREM1-204ENST00000583696 CSRNP3Q8WYN3 585 aa18.81■□□□□ 0.6
GAREM1-204ENST00000583696 MYCNP04198 464 aaPredicted RBP18.59■□□□□ 0.57
GAREM1-204ENST00000583696 U3KPZ7 1027 aaPredicted RBP18.56■□□□□ 0.56
GAREM1-204ENST00000583696 RNF39Q9H2S5 420 aa18.5■□□□□ 0.55
GAREM1-204ENST00000583696 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.41■□□□□ 0.54
GAREM1-204ENST00000583696 HNRNPUL2Q1KMD3 747 aaKnown RBP18.41■□□□□ 0.54
GAREM1-204ENST00000583696 SAMD1Q6SPF0 538 aaPredicted RBP18.34■□□□□ 0.53
GAREM1-204ENST00000583696 C1QBPQ07021 282 aaKnown RBP18.3■□□□□ 0.52
GAREM1-204ENST00000583696 ATXN8OSP0DMR3 200 aa18.23■□□□□ 0.51
GAREM1-204ENST00000583696 APLP2Q06481 763 aa18.21■□□□□ 0.51
GAREM1-204ENST00000583696 ATF5Q9Y2D1 282 aaPredicted RBP18.01■□□□□ 0.47
GAREM1-204ENST00000583696 SPINK5Q9NQ38 1064 aaPredicted RBP17.99■□□□□ 0.47
GAREM1-204ENST00000583696 CAPN15O75808 1086 aa17.94■□□□□ 0.46
GAREM1-204ENST00000583696 CACNB1Q02641 598 aaPredicted RBP17.94■□□□□ 0.46
GAREM1-204ENST00000583696 ZNF219Q9P2Y4 722 aaPredicted RBP17.93■□□□□ 0.46
GAREM1-204ENST00000583696 TRHP20396 242 aaPredicted RBP17.86■□□□□ 0.45
GAREM1-204ENST00000583696 DSG3P32926 999 aa17.62■□□□□ 0.41
GAREM1-204ENST00000583696 ABCB7O75027 752 aa17.58■□□□□ 0.4
GAREM1-204ENST00000583696 POLA2Q14181 598 aa17.58■□□□□ 0.4
GAREM1-204ENST00000583696 ZBTB12Q9Y330 459 aaPredicted RBP17.38■□□□□ 0.37
GAREM1-204ENST00000583696 FBLN2P98095 1184 aa17.32■□□□□ 0.36
GAREM1-204ENST00000583696 MKRN4PQ13434 485 aaPredicted RBP17.25■□□□□ 0.35
GAREM1-204ENST00000583696 FKBP8Q14318 412 aa17.02■□□□□ 0.32
GAREM1-204ENST00000583696 OSCARQ8IYS5 282 aa17.01■□□□□ 0.31
GAREM1-204ENST00000583696 SPDYE4A6NLX3 237 aa16.93■□□□□ 0.3
GAREM1-204ENST00000583696 SPDYE2BA6NHP3 402 aa16.9■□□□□ 0.3
GAREM1-204ENST00000583696 SPDYE6P0CI01 402 aa16.9■□□□□ 0.3
GAREM1-204ENST00000583696 SPDYE2Q495Y8 402 aa16.9■□□□□ 0.3
GAREM1-204ENST00000583696 RBM42Q9BTD8 480 aaKnown RBP16.85■□□□□ 0.29
GAREM1-204ENST00000583696 ZNF692Q9BU19 519 aaPredicted RBP16.81■□□□□ 0.28
GAREM1-204ENST00000583696 SSUH2Q9Y2M2 353 aa16.77■□□□□ 0.28
GAREM1-204ENST00000583696 PROM2Q8N271 834 aa16.69■□□□□ 0.26
GAREM1-204ENST00000583696 AKT1S1Q96B36 256 aa16.63■□□□□ 0.25
GAREM1-204ENST00000583696 PABPN1Q86U42 306 aaKnown RBP eCLIP16.59■□□□□ 0.25
GAREM1-204ENST00000583696 REM2Q8IYK8 340 aaPredicted RBP16.44■□□□□ 0.22
GAREM1-204ENST00000583696 FBXO3Q9UK99 471 aa16.43■□□□□ 0.22
GAREM1-204ENST00000583696 SPDYE1Q8NFV5 336 aaPredicted RBP16.37■□□□□ 0.21
GAREM1-204ENST00000583696 STAG3Q9UJ98 1225 aa16.37■□□□□ 0.21
GAREM1-204ENST00000583696 PITPNM1O00562 1244 aa16.26■□□□□ 0.19
GAREM1-204ENST00000583696 CLEC11AQ9Y240 323 aa16.25■□□□□ 0.19
GAREM1-204ENST00000583696 VASPP50552 380 aaPredicted RBP16.19■□□□□ 0.18
GAREM1-204ENST00000583696 PRR29P0C7W0 189 aa16.13■□□□□ 0.17
GAREM1-204ENST00000583696 CHRDL2Q6WN34 429 aa16.07■□□□□ 0.16
GAREM1-204ENST00000583696 PLCD3Q8N3E9 789 aa16.03■□□□□ 0.16
GAREM1-204ENST00000583696 MIER1Q8N108 512 aa16.02■□□□□ 0.16
GAREM1-204ENST00000583696 PLEKHG5O94827 1062 aa16■□□□□ 0.15
GAREM1-204ENST00000583696 FXR2P51116 673 aaKnown RBP eCLIP15.94■□□□□ 0.14
GAREM1-204ENST00000583696 IFNLR1Q8IU57 520 aaPredicted RBP15.94■□□□□ 0.14
GAREM1-204ENST00000583696 CREBZFQ9NS37 354 aa15.94■□□□□ 0.14
GAREM1-204ENST00000583696 ZBTB47Q9UFB7 747 aaPredicted RBP15.91■□□□□ 0.14
GAREM1-204ENST00000583696 KLHL34Q8N239 644 aa15.87■□□□□ 0.13
GAREM1-204ENST00000583696 PIP4P2Q8N4L2 257 aa15.87■□□□□ 0.13
GAREM1-204ENST00000583696 PRKAR2AP13861 404 aaKnown RBP15.84■□□□□ 0.13
GAREM1-204ENST00000583696 CHADLQ6NUI6 762 aa15.83■□□□□ 0.12
GAREM1-204ENST00000583696 MNX1P50219 401 aaPredicted RBP15.79■□□□□ 0.12
GAREM1-204ENST00000583696 SPOCK2Q92563 424 aa15.77■□□□□ 0.12
GAREM1-204ENST00000583696 FARP1Q9Y4F1 1045 aaPredicted RBP15.73■□□□□ 0.11
GAREM1-204ENST00000583696 NPM1P06748 294 aaKnown RBP eCLIP15.71■□□□□ 0.11
GAREM1-204ENST00000583696 AMER1Q5JTC6 1135 aaPredicted RBP15.7■□□□□ 0.1
GAREM1-204ENST00000583696 NUBP1P53384 320 aa15.62■□□□□ 0.09
GAREM1-204ENST00000583696 RTN4Q9NQC3 1192 aaKnown RBP15.59■□□□□ 0.09
GAREM1-204ENST00000583696 FAM212AQ96EL1 285 aa15.54■□□□□ 0.08
GAREM1-204ENST00000583696 RASEFQ8IZ41 740 aa15.53■□□□□ 0.08
GAREM1-204ENST00000583696 GSE1Q14687 1217 aa15.5■□□□□ 0.07
GAREM1-204ENST00000583696 CIZ1Q9ULV3 898 aaPredicted RBP15.48■□□□□ 0.07
GAREM1-204ENST00000583696 DCAF8Q5TAQ9 597 aa15.46■□□□□ 0.07
GAREM1-204ENST00000583696 POTEHQ6S545 545 aa15.46■□□□□ 0.07
GAREM1-204ENST00000583696 PAK3O75914 559 aaPredicted RBP15.44■□□□□ 0.06
GAREM1-204ENST00000583696 PKD2Q13563 968 aa15.44■□□□□ 0.06
GAREM1-204ENST00000583696 CD44P16070 742 aaKnown RBP15.41■□□□□ 0.06
GAREM1-204ENST00000583696 TRIM41Q8WV44 630 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms