RNA–Protein interactions for RNA: ENST00000583543.1

GDPD1-207, Transcript of glycerophosphodiester phosphodiesterase domain containing 1, humanhuman

TSL 2

Gene GDPD1, Length 738 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD1-207ENST00000583543 AEBP2Q6ZN18 517 aaPredicted RBP41.34■■■■■ 4.21
GDPD1-207ENST00000583543 CHIC1Q5VXU3 224 aa41.33■■■■■ 4.21
GDPD1-207ENST00000583543 PHF23Q9BUL5 403 aaPredicted RBP36.34■■■■□ 3.41
GDPD1-207ENST00000583543 SENP3Q9H4L4 574 aaPredicted RBP35.14■■■■□ 3.22
GDPD1-207ENST00000583543 PLPPR3Q6T4P5 718 aa34.03■■■■□ 3.04
GDPD1-207ENST00000583543 FOXD1Q16676 465 aa32.39■■■□□ 2.78
GDPD1-207ENST00000583543 ADRA2BP18089 450 aa31.87■■■□□ 2.69
GDPD1-207ENST00000583543 PPP6R1Q9UPN7 881 aa31.78■■■□□ 2.68
GDPD1-207ENST00000583543 PIAS4Q8N2W9 510 aaPredicted RBP30.86■■■□□ 2.53
GDPD1-207ENST00000583543 KCNA4P22459 653 aa30.27■■■□□ 2.44
GDPD1-207ENST00000583543 PPP4R3CPQ6ZMV5 832 aa30.05■■■□□ 2.4
GDPD1-207ENST00000583543 MSH5O43196 834 aa29.68■■■□□ 2.34
GDPD1-207ENST00000583543 NCBP3Q53F19 620 aaKnown RBP29.65■■■□□ 2.34
GDPD1-207ENST00000583543 SCAF1Q9H7N4 1312 aaKnown RBP29.37■■■□□ 2.29
GDPD1-207ENST00000583543 EHMT2Q96KQ7 1210 aa29.23■■■□□ 2.27
GDPD1-207ENST00000583543 SLC4A1APQ9BWU0 796 aaKnown RBP29.08■■■□□ 2.25
GDPD1-207ENST00000583543 CNKSR2Q8WXI2 1034 aa29.05■■■□□ 2.24
GDPD1-207ENST00000583543 NPM3O75607 178 aaKnown RBP29.04■■■□□ 2.24
GDPD1-207ENST00000583543 MAPK8IP2Q13387 824 aaPredicted RBP28.64■■■□□ 2.18
GDPD1-207ENST00000583543 CSRNP3Q8WYN3 585 aa28.39■■■□□ 2.14
GDPD1-207ENST00000583543 RNF216Q9NWF9 866 aaPredicted RBP28.26■■■□□ 2.11
GDPD1-207ENST00000583543 DMRT2Q9Y5R5 561 aa28.13■■■□□ 2.09
GDPD1-207ENST00000583543 DNAJC5BQ9UF47 199 aa28.04■■■□□ 2.08
GDPD1-207ENST00000583543 HOXD11P31277 338 aaPredicted RBP27.86■■■□□ 2.05
GDPD1-207ENST00000583543 ZBTB22O15209 634 aa27.78■■■□□ 2.04
GDPD1-207ENST00000583543 FOXD4L1Q9NU39 408 aa27.69■■■□□ 2.02
GDPD1-207ENST00000583543 SLC4A2P04920 1241 aa27.15■■□□□ 1.94
GDPD1-207ENST00000583543 DCAF8L1A6NGE4 600 aa27■■□□□ 1.91
GDPD1-207ENST00000583543 MYCNP04198 464 aaPredicted RBP26.91■■□□□ 1.9
GDPD1-207ENST00000583543 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.7■■□□□ 1.86
GDPD1-207ENST00000583543 ATXN8OSP0DMR3 200 aa26.68■■□□□ 1.86
GDPD1-207ENST00000583543 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.38■■□□□ 1.81
GDPD1-207ENST00000583543 HNRNPUL2Q1KMD3 747 aaKnown RBP26.38■■□□□ 1.81
GDPD1-207ENST00000583543 SAMD1Q6SPF0 538 aaPredicted RBP26.28■■□□□ 1.8
GDPD1-207ENST00000583543 U3KPZ7 1027 aaPredicted RBP26.21■■□□□ 1.79
GDPD1-207ENST00000583543 ATF5Q9Y2D1 282 aaPredicted RBP25.96■■□□□ 1.75
GDPD1-207ENST00000583543 APLP2Q06481 763 aa25.95■■□□□ 1.74
GDPD1-207ENST00000583543 FKBP8Q14318 412 aa25.72■■□□□ 1.71
GDPD1-207ENST00000583543 ZNF219Q9P2Y4 722 aaPredicted RBP25.61■■□□□ 1.69
GDPD1-207ENST00000583543 RNF39Q9H2S5 420 aa25.41■■□□□ 1.66
GDPD1-207ENST00000583543 POTEDQ86YR6 584 aa25.4■■□□□ 1.66
GDPD1-207ENST00000583543 TRHP20396 242 aaPredicted RBP25.29■■□□□ 1.64
GDPD1-207ENST00000583543 C1QBPQ07021 282 aaKnown RBP25.25■■□□□ 1.63
GDPD1-207ENST00000583543 CAPN15O75808 1086 aa25.22■■□□□ 1.63
GDPD1-207ENST00000583543 SPINK5Q9NQ38 1064 aaPredicted RBP25.22■■□□□ 1.63
GDPD1-207ENST00000583543 FBLN2P98095 1184 aa25.06■■□□□ 1.6
GDPD1-207ENST00000583543 POLA2Q14181 598 aa25.04■■□□□ 1.6
GDPD1-207ENST00000583543 AMER1Q5JTC6 1135 aaPredicted RBP25■■□□□ 1.59
GDPD1-207ENST00000583543 SPDYE4A6NLX3 237 aa24.89■■□□□ 1.58
GDPD1-207ENST00000583543 MKRN4PQ13434 485 aaPredicted RBP24.89■■□□□ 1.58
GDPD1-207ENST00000583543 RTN4Q9NQC3 1192 aaKnown RBP24.84■■□□□ 1.57
GDPD1-207ENST00000583543 ZBTB12Q9Y330 459 aaPredicted RBP24.81■■□□□ 1.56
GDPD1-207ENST00000583543 ABCB7O75027 752 aa24.75■■□□□ 1.55
GDPD1-207ENST00000583543 FBXO3Q9UK99 471 aa24.69■■□□□ 1.54
GDPD1-207ENST00000583543 DSG3P32926 999 aa24.48■■□□□ 1.51
GDPD1-207ENST00000583543 PROM2Q8N271 834 aa24.46■■□□□ 1.51
GDPD1-207ENST00000583543 CACNB1Q02641 598 aaPredicted RBP24.24■■□□□ 1.47
GDPD1-207ENST00000583543 VASPP50552 380 aaPredicted RBP24.21■■□□□ 1.47
GDPD1-207ENST00000583543 ZNF692Q9BU19 519 aaPredicted RBP24.19■■□□□ 1.46
GDPD1-207ENST00000583543 SPDYE2BA6NHP3 402 aa24.13■■□□□ 1.45
GDPD1-207ENST00000583543 SPDYE6P0CI01 402 aa24.13■■□□□ 1.45
GDPD1-207ENST00000583543 SPDYE2Q495Y8 402 aa24.13■■□□□ 1.45
GDPD1-207ENST00000583543 OSCARQ8IYS5 282 aa24.12■■□□□ 1.45
GDPD1-207ENST00000583543 SSUH2Q9Y2M2 353 aa23.95■■□□□ 1.42
GDPD1-207ENST00000583543 SLC24A1O60721 1099 aa23.93■■□□□ 1.42
GDPD1-207ENST00000583543 IFNLR1Q8IU57 520 aaPredicted RBP23.88■■□□□ 1.41
GDPD1-207ENST00000583543 STAG3Q9UJ98 1225 aa23.88■■□□□ 1.41
GDPD1-207ENST00000583543 PABPN1Q86U42 306 aaKnown RBP eCLIP23.86■■□□□ 1.41
GDPD1-207ENST00000583543 KLHL34Q8N239 644 aa23.73■■□□□ 1.39
GDPD1-207ENST00000583543 PLCD3Q8N3E9 789 aa23.67■■□□□ 1.38
GDPD1-207ENST00000583543 MIER1Q8N108 512 aa23.58■■□□□ 1.37
GDPD1-207ENST00000583543 SPOCK2Q92563 424 aa23.58■■□□□ 1.37
GDPD1-207ENST00000583543 PLEKHG5O94827 1062 aa23.52■■□□□ 1.36
GDPD1-207ENST00000583543 RBM42Q9BTD8 480 aaKnown RBP23.45■■□□□ 1.34
GDPD1-207ENST00000583543 DCAF8L2P0C7V8 631 aa23.44■■□□□ 1.34
GDPD1-207ENST00000583543 PKD2Q13563 968 aa23.39■■□□□ 1.33
GDPD1-207ENST00000583543 ZBTB47Q9UFB7 747 aaPredicted RBP23.39■■□□□ 1.33
GDPD1-207ENST00000583543 AKT1S1Q96B36 256 aa23.29■■□□□ 1.32
GDPD1-207ENST00000583543 SPDYE1Q8NFV5 336 aaPredicted RBP23.25■■□□□ 1.31
GDPD1-207ENST00000583543 ECM2O94769 699 aaPredicted RBP23.23■■□□□ 1.31
GDPD1-207ENST00000583543 CLEC11AQ9Y240 323 aa23.1■■□□□ 1.29
GDPD1-207ENST00000583543 CIZ1Q9ULV3 898 aaPredicted RBP23.09■■□□□ 1.29
GDPD1-207ENST00000583543 PLCB2Q00722 1185 aa23.05■■□□□ 1.28
GDPD1-207ENST00000583543 PRR29P0C7W0 189 aa23.02■■□□□ 1.28
GDPD1-207ENST00000583543 REM2Q8IYK8 340 aaPredicted RBP23.02■■□□□ 1.28
GDPD1-207ENST00000583543 TRIM41Q8WV44 630 aa22.92■■□□□ 1.26
GDPD1-207ENST00000583543 GSE1Q14687 1217 aa22.88■■□□□ 1.25
GDPD1-207ENST00000583543 RGL2O15211 777 aa22.87■■□□□ 1.25
GDPD1-207ENST00000583543 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.86■■□□□ 1.25
GDPD1-207ENST00000583543 BBXQ8WY36 941 aaPredicted RBP22.81■■□□□ 1.24
GDPD1-207ENST00000583543 CREBZFQ9NS37 354 aa22.8■■□□□ 1.24
GDPD1-207ENST00000583543 HAP1P54257 671 aaPredicted RBP22.79■■□□□ 1.24
GDPD1-207ENST00000583543 NUBP1P53384 320 aa22.75■■□□□ 1.23
GDPD1-207ENST00000583543 DCAF8Q5TAQ9 597 aa22.75■■□□□ 1.23
GDPD1-207ENST00000583543 PITPNM1O00562 1244 aa22.72■■□□□ 1.23
GDPD1-207ENST00000583543 FAM212AQ96EL1 285 aa22.69■■□□□ 1.22
GDPD1-207ENST00000583543 NPM1P06748 294 aaKnown RBP eCLIP22.66■■□□□ 1.22
GDPD1-207ENST00000583543 CHGAP10645 457 aaKnown RBP22.62■■□□□ 1.21
GDPD1-207ENST00000583543 MNX1P50219 401 aaPredicted RBP22.6■■□□□ 1.21
GDPD1-207ENST00000583543 TAOK2Q9UL54 1235 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms