RNA–Protein interactions for RNA: ENST00000581454.5

EPB41L3-225, Transcript of erythrocyte membrane protein band 4.1 like 3, human

TSL 5

Gene EPB41L3, Length 484 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EPB41L3-225	ENST00000581454	AEBP2	Q6ZN18	517 aa	Predicted RBP	22.41	■■□□□ 1.18
EPB41L3-225	ENST00000581454	CHIC1	Q5VXU3	224 aa		21.46	■■□□□ 1.03
EPB41L3-225	ENST00000581454	SENP3	Q9H4L4	574 aa	Predicted RBP	19.1	■□□□□ 0.65
EPB41L3-225	ENST00000581454	PHF23	Q9BUL5	403 aa	Predicted RBP	18.85	■□□□□ 0.61
EPB41L3-225	ENST00000581454	FOXD1	Q16676	465 aa		17.76	■□□□□ 0.43
EPB41L3-225	ENST00000581454	PLPPR3	Q6T4P5	718 aa		17.22	■□□□□ 0.35
EPB41L3-225	ENST00000581454	PPP6R1	Q9UPN7	881 aa		16.73	■□□□□ 0.27
EPB41L3-225	ENST00000581454	ADRA2B	P18089	450 aa		16.68	■□□□□ 0.26
EPB41L3-225	ENST00000581454	PIAS4	Q8N2W9	510 aa	Predicted RBP	16.65	■□□□□ 0.26
EPB41L3-225	ENST00000581454	MSH5	O43196	834 aa		16.58	■□□□□ 0.24
EPB41L3-225	ENST00000581454	POTED	Q86YR6	584 aa		15.88	■□□□□ 0.13
EPB41L3-225	ENST00000581454	SCAF1	Q9H7N4	1312 aa	Known RBP	15.27	■□□□□ 0.04
EPB41L3-225	ENST00000581454	MAPK8IP2	Q13387	824 aa	Predicted RBP	15.26	■□□□□ 0.03
EPB41L3-225	ENST00000581454	DMRT2	Q9Y5R5	561 aa		15.18	■□□□□ 0.02
EPB41L3-225	ENST00000581454	PPP4R3CP	Q6ZMV5	832 aa		15.11	■□□□□ 0.01
EPB41L3-225	ENST00000581454	CNKSR2	Q8WXI2	1034 aa		14.79	□□□□□ -0.04
EPB41L3-225	ENST00000581454	HOXD11	P31277	338 aa	Predicted RBP	14.69	□□□□□ -0.06
EPB41L3-225	ENST00000581454	RNF216	Q9NWF9	866 aa	Predicted RBP	14.62	□□□□□ -0.07
EPB41L3-225	ENST00000581454	NCBP3	Q53F19	620 aa	Known RBP	14.58	□□□□□ -0.08
EPB41L3-225	ENST00000581454	DCAF8L1	A6NGE4	600 aa		14.5	□□□□□ -0.09
EPB41L3-225	ENST00000581454	NPM3	O75607	178 aa	Known RBP	14.37	□□□□□ -0.11
EPB41L3-225	ENST00000581454	KCNA4	P22459	653 aa		14.24	□□□□□ -0.13
EPB41L3-225	ENST00000581454	RNF39	Q9H2S5	420 aa		14.17	□□□□□ -0.14
EPB41L3-225	ENST00000581454	DNAJC5B	Q9UF47	199 aa		14.17	□□□□□ -0.14
EPB41L3-225	ENST00000581454	CACNB1	Q02641	598 aa	Predicted RBP	14.1	□□□□□ -0.15
EPB41L3-225	ENST00000581454	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
EPB41L3-225	ENST00000581454	C1QBP	Q07021	282 aa	Known RBP	13.96	□□□□□ -0.17
EPB41L3-225	ENST00000581454		U3KPZ7	1027 aa	Predicted RBP	13.71	□□□□□ -0.21
EPB41L3-225	ENST00000581454	SLC4A2	P04920	1241 aa		13.67	□□□□□ -0.22
EPB41L3-225	ENST00000581454	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.48	□□□□□ -0.25
EPB41L3-225	ENST00000581454	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.45	□□□□□ -0.26
EPB41L3-225	ENST00000581454	CAPN15	O75808	1086 aa		13.41	□□□□□ -0.26
EPB41L3-225	ENST00000581454	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.39	□□□□□ -0.27
EPB41L3-225	ENST00000581454	HNRNPUL2	Q1KMD3	747 aa	Known RBP	13.39	□□□□□ -0.27
EPB41L3-225	ENST00000581454	APLP2	Q06481	763 aa		13.36	□□□□□ -0.27
EPB41L3-225	ENST00000581454	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.33	□□□□□ -0.28
EPB41L3-225	ENST00000581454	MYCN	P04198	464 aa	Predicted RBP	13.31	□□□□□ -0.28
EPB41L3-225	ENST00000581454	DSG3	P32926	999 aa		13.31	□□□□□ -0.28
EPB41L3-225	ENST00000581454	FOXD4L1	Q9NU39	408 aa		13.26	□□□□□ -0.29
EPB41L3-225	ENST00000581454	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.25	□□□□□ -0.29
EPB41L3-225	ENST00000581454	TRH	P20396	242 aa	Predicted RBP	13.23	□□□□□ -0.29
EPB41L3-225	ENST00000581454	ABCB7	O75027	752 aa		13.12	□□□□□ -0.31
EPB41L3-225	ENST00000581454	ZBTB22	O15209	634 aa		13.11	□□□□□ -0.31
EPB41L3-225	ENST00000581454	ATF5	Q9Y2D1	282 aa	Predicted RBP	12.96	□□□□□ -0.33
EPB41L3-225	ENST00000581454	POLA2	Q14181	598 aa		12.91	□□□□□ -0.34
EPB41L3-225	ENST00000581454	ATXN8OS	P0DMR3	200 aa		12.84	□□□□□ -0.35
EPB41L3-225	ENST00000581454	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.72	□□□□□ -0.37
EPB41L3-225	ENST00000581454	RBM42	Q9BTD8	480 aa	Known RBP	12.71	□□□□□ -0.37
EPB41L3-225	ENST00000581454	CSRNP3	Q8WYN3	585 aa		12.64	□□□□□ -0.39
EPB41L3-225	ENST00000581454	EHMT2	Q96KQ7	1210 aa		12.56	□□□□□ -0.4
EPB41L3-225	ENST00000581454	OSCAR	Q8IYS5	282 aa		12.53	□□□□□ -0.4
EPB41L3-225	ENST00000581454	POTEH	Q6S545	545 aa		12.48	□□□□□ -0.41
EPB41L3-225	ENST00000581454	FBLN2	P98095	1184 aa		12.45	□□□□□ -0.42
EPB41L3-225	ENST00000581454	AKT1S1	Q96B36	256 aa		12.45	□□□□□ -0.42
EPB41L3-225	ENST00000581454	MKRN4P	Q13434	485 aa	Predicted RBP	12.38	□□□□□ -0.43
EPB41L3-225	ENST00000581454	CHRDL2	Q6WN34	429 aa		12.35	□□□□□ -0.43
EPB41L3-225	ENST00000581454	SPDYE2B	A6NHP3	402 aa		12.32	□□□□□ -0.44
EPB41L3-225	ENST00000581454	SPDYE6	P0CI01	402 aa		12.32	□□□□□ -0.44
EPB41L3-225	ENST00000581454	SPDYE2	Q495Y8	402 aa		12.32	□□□□□ -0.44
EPB41L3-225	ENST00000581454	REM2	Q8IYK8	340 aa	Predicted RBP	12.32	□□□□□ -0.44
EPB41L3-225	ENST00000581454	PITPNM1	O00562	1244 aa		12.19	□□□□□ -0.46
EPB41L3-225	ENST00000581454	SSUH2	Q9Y2M2	353 aa		12.19	□□□□□ -0.46
EPB41L3-225	ENST00000581454	ZNF692	Q9BU19	519 aa	Predicted RBP	12.17	□□□□□ -0.46
EPB41L3-225	ENST00000581454	PIP4P2	Q8N4L2	257 aa		12.1	□□□□□ -0.47
EPB41L3-225	ENST00000581454	SPDYE1	Q8NFV5	336 aa	Predicted RBP	12.06	□□□□□ -0.48
EPB41L3-225	ENST00000581454	FXR2	P51116	673 aa	Known RBP eCLIP	12.05	□□□□□ -0.48
EPB41L3-225	ENST00000581454	PABPN1	Q86U42	306 aa	Known RBP eCLIP	12.01	□□□□□ -0.49
EPB41L3-225	ENST00000581454	CLEC11A	Q9Y240	323 aa		12	□□□□□ -0.49
EPB41L3-225	ENST00000581454	SPDYE4	A6NLX3	237 aa		11.88	□□□□□ -0.51
EPB41L3-225	ENST00000581454	PRKAR2A	P13861	404 aa	Known RBP	11.87	□□□□□ -0.51
EPB41L3-225	ENST00000581454	PRR29	P0C7W0	189 aa		11.84	□□□□□ -0.51
EPB41L3-225	ENST00000581454	HAX1	O00165	279 aa		11.8	□□□□□ -0.52
EPB41L3-225	ENST00000581454	SP7	Q8TDD2	431 aa	Predicted RBP	11.79	□□□□□ -0.52
EPB41L3-225	ENST00000581454	CHADL	Q6NUI6	762 aa		11.76	□□□□□ -0.53
EPB41L3-225	ENST00000581454	STAG3	Q9UJ98	1225 aa		11.73	□□□□□ -0.53
EPB41L3-225	ENST00000581454	C19orf67	A6NJJ6	358 aa		11.67	□□□□□ -0.54
EPB41L3-225	ENST00000581454	EVX2	Q03828	476 aa		11.67	□□□□□ -0.54
EPB41L3-225	ENST00000581454	PROM2	Q8N271	834 aa		11.65	□□□□□ -0.54
EPB41L3-225	ENST00000581454	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.62	□□□□□ -0.55
EPB41L3-225	ENST00000581454	CREBZF	Q9NS37	354 aa		11.6	□□□□□ -0.55
EPB41L3-225	ENST00000581454	CD44	P16070	742 aa	Known RBP	11.51	□□□□□ -0.57
EPB41L3-225	ENST00000581454	FKBP8	Q14318	412 aa		11.45	□□□□□ -0.58
EPB41L3-225	ENST00000581454	GABBR2	O75899	941 aa		11.43	□□□□□ -0.58
EPB41L3-225	ENST00000581454	MNX1	P50219	401 aa	Predicted RBP	11.43	□□□□□ -0.58
EPB41L3-225	ENST00000581454	NPM1	P06748	294 aa	Known RBP eCLIP	11.38	□□□□□ -0.59
EPB41L3-225	ENST00000581454	ZNF579	Q8NAF0	562 aa	Known RBP	11.36	□□□□□ -0.59
EPB41L3-225	ENST00000581454	ZRANB1	Q9UGI0	708 aa		11.36	□□□□□ -0.59
EPB41L3-225	ENST00000581454	CLCN6	P51797	869 aa		11.34	□□□□□ -0.59
EPB41L3-225	ENST00000581454	PAK3	O75914	559 aa	Predicted RBP	11.32	□□□□□ -0.6
EPB41L3-225	ENST00000581454	PLEKHG5	O94827	1062 aa		11.29	□□□□□ -0.6
EPB41L3-225	ENST00000581454	MIER1	Q8N108	512 aa		11.29	□□□□□ -0.6
EPB41L3-225	ENST00000581454	PLCD3	Q8N3E9	789 aa		11.23	□□□□□ -0.61
EPB41L3-225	ENST00000581454	PHF12	Q96QT6	1004 aa		11.23	□□□□□ -0.61
EPB41L3-225	ENST00000581454	POTEI	P0CG38	1075 aa		11.19	□□□□□ -0.62
EPB41L3-225	ENST00000581454	GALR2	O43603	387 aa	Predicted RBP	11.18	□□□□□ -0.62
EPB41L3-225	ENST00000581454	FBXO3	Q9UK99	471 aa		11.18	□□□□□ -0.62
EPB41L3-225	ENST00000581454	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.17	□□□□□ -0.62
EPB41L3-225	ENST00000581454	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.16	□□□□□ -0.62
EPB41L3-225	ENST00000581454	DCBLD2	Q96PD2	775 aa		11.15	□□□□□ -0.62
EPB41L3-225	ENST00000581454	RASEF	Q8IZ41	740 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms