RNA–Protein interactions for RNA: ENST00000580987.1

RAB12-202, Transcript of RAB12, member RAS oncogene family, humanhuman

TSL 5

Gene RAB12, Length 504 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB12-202ENST00000580987 AEBP2Q6ZN18 517 aaPredicted RBP25.63■■□□□ 1.69
RAB12-202ENST00000580987 CHIC1Q5VXU3 224 aa24.15■■□□□ 1.46
RAB12-202ENST00000580987 SENP3Q9H4L4 574 aaPredicted RBP21.97■■□□□ 1.11
RAB12-202ENST00000580987 PHF23Q9BUL5 403 aaPredicted RBP21.64■■□□□ 1.05
RAB12-202ENST00000580987 FOXD1Q16676 465 aa20.47■□□□□ 0.87
RAB12-202ENST00000580987 MSH5O43196 834 aa19.31■□□□□ 0.68
RAB12-202ENST00000580987 PLPPR3Q6T4P5 718 aa19.21■□□□□ 0.67
RAB12-202ENST00000580987 POTEDQ86YR6 584 aa19.21■□□□□ 0.67
RAB12-202ENST00000580987 PIAS4Q8N2W9 510 aaPredicted RBP19.06■□□□□ 0.64
RAB12-202ENST00000580987 PPP6R1Q9UPN7 881 aa18.94■□□□□ 0.62
RAB12-202ENST00000580987 ADRA2BP18089 450 aa18.85■□□□□ 0.61
RAB12-202ENST00000580987 MAPK8IP2Q13387 824 aaPredicted RBP17.38■□□□□ 0.37
RAB12-202ENST00000580987 DMRT2Q9Y5R5 561 aa17.38■□□□□ 0.37
RAB12-202ENST00000580987 SCAF1Q9H7N4 1312 aaKnown RBP17.35■□□□□ 0.37
RAB12-202ENST00000580987 PPP4R3CPQ6ZMV5 832 aa16.78■□□□□ 0.28
RAB12-202ENST00000580987 CACNB1Q02641 598 aaPredicted RBP16.68■□□□□ 0.26
RAB12-202ENST00000580987 HOXD11P31277 338 aaPredicted RBP16.65■□□□□ 0.26
RAB12-202ENST00000580987 DCAF8L1A6NGE4 600 aa16.63■□□□□ 0.25
RAB12-202ENST00000580987 CNKSR2Q8WXI2 1034 aa16.55■□□□□ 0.24
RAB12-202ENST00000580987 RNF216Q9NWF9 866 aaPredicted RBP16.47■□□□□ 0.23
RAB12-202ENST00000580987 RNF39Q9H2S5 420 aa16.42■□□□□ 0.22
RAB12-202ENST00000580987 C1QBPQ07021 282 aaKnown RBP16.21■□□□□ 0.19
RAB12-202ENST00000580987 DNAJC5BQ9UF47 199 aa16.2■□□□□ 0.18
RAB12-202ENST00000580987 NCBP3Q53F19 620 aaKnown RBP16.11■□□□□ 0.17
RAB12-202ENST00000580987 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.85■□□□□ 0.13
RAB12-202ENST00000580987 NPM3O75607 178 aaKnown RBP15.81■□□□□ 0.12
RAB12-202ENST00000580987 U3KPZ7 1027 aaPredicted RBP15.46■□□□□ 0.07
RAB12-202ENST00000580987 CAPN15O75808 1086 aa15.31■□□□□ 0.04
RAB12-202ENST00000580987 DSG3P32926 999 aa15.29■□□□□ 0.04
RAB12-202ENST00000580987 SPINK5Q9NQ38 1064 aaPredicted RBP15.29■□□□□ 0.04
RAB12-202ENST00000580987 KCNA4P22459 653 aa15.27■□□□□ 0.04
RAB12-202ENST00000580987 SLC4A2P04920 1241 aa15.16■□□□□ 0.02
RAB12-202ENST00000580987 APLP2Q06481 763 aa15.1■□□□□ 0.01
RAB12-202ENST00000580987 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.02■□□□□ -0
RAB12-202ENST00000580987 HNRNPUL2Q1KMD3 747 aaKnown RBP15.02■□□□□ -0
RAB12-202ENST00000580987 POTEHQ6S545 545 aa15.02■□□□□ -0
RAB12-202ENST00000580987 ZNF219Q9P2Y4 722 aaPredicted RBP15□□□□□ -0.01
RAB12-202ENST00000580987 TRHP20396 242 aaPredicted RBP14.99□□□□□ -0.01
RAB12-202ENST00000580987 SAMD1Q6SPF0 538 aaPredicted RBP14.9□□□□□ -0.02
RAB12-202ENST00000580987 ABCB7O75027 752 aa14.89□□□□□ -0.03
RAB12-202ENST00000580987 MYCNP04198 464 aaPredicted RBP14.66□□□□□ -0.06
RAB12-202ENST00000580987 RBM42Q9BTD8 480 aaKnown RBP14.64□□□□□ -0.07
RAB12-202ENST00000580987 POLA2Q14181 598 aa14.56□□□□□ -0.08
RAB12-202ENST00000580987 SLC4A1APQ9BWU0 796 aaKnown RBP14.39□□□□□ -0.11
RAB12-202ENST00000580987 CHRDL2Q6WN34 429 aa14.37□□□□□ -0.11
RAB12-202ENST00000580987 FOXD4L1Q9NU39 408 aa14.36□□□□□ -0.11
RAB12-202ENST00000580987 ZBTB12Q9Y330 459 aaPredicted RBP14.29□□□□□ -0.12
RAB12-202ENST00000580987 ATF5Q9Y2D1 282 aaPredicted RBP14.28□□□□□ -0.12
RAB12-202ENST00000580987 AKT1S1Q96B36 256 aa14.24□□□□□ -0.13
RAB12-202ENST00000580987 REM2Q8IYK8 340 aaPredicted RBP14.08□□□□□ -0.16
RAB12-202ENST00000580987 OSCARQ8IYS5 282 aa14.05□□□□□ -0.16
RAB12-202ENST00000580987 ZBTB22O15209 634 aa14□□□□□ -0.17
RAB12-202ENST00000580987 ATXN8OSP0DMR3 200 aa14□□□□□ -0.17
RAB12-202ENST00000580987 PIP4P2Q8N4L2 257 aa13.97□□□□□ -0.17
RAB12-202ENST00000580987 SP7Q8TDD2 431 aaPredicted RBP13.96□□□□□ -0.17
RAB12-202ENST00000580987 PITPNM1O00562 1244 aa13.9□□□□□ -0.18
RAB12-202ENST00000580987 FXR2P51116 673 aaKnown RBP eCLIP13.88□□□□□ -0.19
RAB12-202ENST00000580987 FBLN2P98095 1184 aa13.82□□□□□ -0.2
RAB12-202ENST00000580987 SPDYE2BA6NHP3 402 aa13.81□□□□□ -0.2
RAB12-202ENST00000580987 SPDYE6P0CI01 402 aa13.81□□□□□ -0.2
RAB12-202ENST00000580987 SPDYE2Q495Y8 402 aa13.81□□□□□ -0.2
RAB12-202ENST00000580987 HAX1O00165 279 aa13.8□□□□□ -0.2
RAB12-202ENST00000580987 SPDYE1Q8NFV5 336 aaPredicted RBP13.63□□□□□ -0.23
RAB12-202ENST00000580987 MKRN4PQ13434 485 aaPredicted RBP13.62□□□□□ -0.23
RAB12-202ENST00000580987 ZNF692Q9BU19 519 aaPredicted RBP13.59□□□□□ -0.23
RAB12-202ENST00000580987 CLEC11AQ9Y240 323 aa13.58□□□□□ -0.24
RAB12-202ENST00000580987 EVX2Q03828 476 aa13.57□□□□□ -0.24
RAB12-202ENST00000580987 SSUH2Q9Y2M2 353 aa13.57□□□□□ -0.24
RAB12-202ENST00000580987 PRKAR2AP13861 404 aaKnown RBP13.56□□□□□ -0.24
RAB12-202ENST00000580987 C19orf67A6NJJ6 358 aa13.43□□□□□ -0.26
RAB12-202ENST00000580987 PABPN1Q86U42 306 aaKnown RBP eCLIP13.36□□□□□ -0.27
RAB12-202ENST00000580987 PRR29P0C7W0 189 aa13.35□□□□□ -0.27
RAB12-202ENST00000580987 CHADLQ6NUI6 762 aa13.31□□□□□ -0.28
RAB12-202ENST00000580987 GABBR2O75899 941 aa13.29□□□□□ -0.28
RAB12-202ENST00000580987 CSRNP3Q8WYN3 585 aa13.18□□□□□ -0.3
RAB12-202ENST00000580987 FARP1Q9Y4F1 1045 aaPredicted RBP13.15□□□□□ -0.3
RAB12-202ENST00000580987 CD44P16070 742 aaKnown RBP13.11□□□□□ -0.31
RAB12-202ENST00000580987 CLCN6P51797 869 aa13.11□□□□□ -0.31
RAB12-202ENST00000580987 LHX8Q68G74 356 aa13.11□□□□□ -0.31
RAB12-202ENST00000580987 STAG3Q9UJ98 1225 aa13.01□□□□□ -0.33
RAB12-202ENST00000580987 POTEIP0CG38 1075 aa12.98□□□□□ -0.33
RAB12-202ENST00000580987 CREBZFQ9NS37 354 aa12.93□□□□□ -0.34
RAB12-202ENST00000580987 ZNF579Q8NAF0 562 aaKnown RBP12.91□□□□□ -0.34
RAB12-202ENST00000580987 ZRANB1Q9UGI0 708 aa12.9□□□□□ -0.34
RAB12-202ENST00000580987 DCBLD2Q96PD2 775 aa12.89□□□□□ -0.35
RAB12-202ENST00000580987 SPDYE4A6NLX3 237 aa12.88□□□□□ -0.35
RAB12-202ENST00000580987 EHMT2Q96KQ7 1210 aa12.8□□□□□ -0.36
RAB12-202ENST00000580987 PAK3O75914 559 aaPredicted RBP12.77□□□□□ -0.37
RAB12-202ENST00000580987 GALR2O43603 387 aaPredicted RBP12.74□□□□□ -0.37
RAB12-202ENST00000580987 NPM1P06748 294 aaKnown RBP eCLIP12.74□□□□□ -0.37
RAB12-202ENST00000580987 MNX1P50219 401 aaPredicted RBP12.69□□□□□ -0.38
RAB12-202ENST00000580987 PHF12Q96QT6 1004 aa12.65□□□□□ -0.38
RAB12-202ENST00000580987 OTUD5Q96G74 571 aa12.56□□□□□ -0.4
RAB12-202ENST00000580987 PROM2Q8N271 834 aa12.55□□□□□ -0.4
RAB12-202ENST00000580987 POTEB2H3BUK9 544 aa12.54□□□□□ -0.4
RAB12-202ENST00000580987 PELP1Q8IZL8 1130 aaKnown RBP12.52□□□□□ -0.41
RAB12-202ENST00000580987 ASTLQ6HA08 431 aaPredicted RBP12.5□□□□□ -0.41
RAB12-202ENST00000580987 MS4A3Q96HJ5 214 aa12.48□□□□□ -0.41
RAB12-202ENST00000580987 ATMINO43313 823 aaPredicted RBP12.46□□□□□ -0.41
RAB12-202ENST00000580987 C7P10643 843 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms