RNA–Protein interactions for RNA: ENST00000580199.5

LINC00511-208, long intergenic non-protein coding RNA 511, humanhuman

TSL 3

Gene LINC00511, Length 536 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00511-208ENST00000580199 AEBP2Q6ZN18 517 aaPredicted RBP17.81■□□□□ 0.44
LINC00511-208ENST00000580199 CHIC1Q5VXU3 224 aa17.02■□□□□ 0.32
LINC00511-208ENST00000580199 SENP3Q9H4L4 574 aaPredicted RBP15.31■□□□□ 0.04
LINC00511-208ENST00000580199 PHF23Q9BUL5 403 aaPredicted RBP15.06■□□□□ 0
LINC00511-208ENST00000580199 FOXD1Q16676 465 aa14.18□□□□□ -0.14
LINC00511-208ENST00000580199 PLPPR3Q6T4P5 718 aa13.68□□□□□ -0.22
LINC00511-208ENST00000580199 POTEDQ86YR6 584 aa13.51□□□□□ -0.25
LINC00511-208ENST00000580199 PIAS4Q8N2W9 510 aaPredicted RBP13.35□□□□□ -0.27
LINC00511-208ENST00000580199 MSH5O43196 834 aa13.34□□□□□ -0.27
LINC00511-208ENST00000580199 ADRA2BP18089 450 aa13.27□□□□□ -0.29
LINC00511-208ENST00000580199 PPP6R1Q9UPN7 881 aa13.25□□□□□ -0.29
LINC00511-208ENST00000580199 SCAF1Q9H7N4 1312 aaKnown RBP12.25□□□□□ -0.45
LINC00511-208ENST00000580199 MAPK8IP2Q13387 824 aaPredicted RBP12.14□□□□□ -0.47
LINC00511-208ENST00000580199 DMRT2Q9Y5R5 561 aa12.1□□□□□ -0.47
LINC00511-208ENST00000580199 PPP4R3CPQ6ZMV5 832 aa11.97□□□□□ -0.49
LINC00511-208ENST00000580199 CNKSR2Q8WXI2 1034 aa11.75□□□□□ -0.53
LINC00511-208ENST00000580199 DCAF8L1A6NGE4 600 aa11.71□□□□□ -0.53
LINC00511-208ENST00000580199 HOXD11P31277 338 aaPredicted RBP11.65□□□□□ -0.54
LINC00511-208ENST00000580199 RNF216Q9NWF9 866 aaPredicted RBP11.62□□□□□ -0.55
LINC00511-208ENST00000580199 NCBP3Q53F19 620 aaKnown RBP11.6□□□□□ -0.55
LINC00511-208ENST00000580199 CACNB1Q02641 598 aaPredicted RBP11.57□□□□□ -0.56
LINC00511-208ENST00000580199 NPM3O75607 178 aaKnown RBP11.34□□□□□ -0.59
LINC00511-208ENST00000580199 RNF39Q9H2S5 420 aa11.33□□□□□ -0.6
LINC00511-208ENST00000580199 DNAJC5BQ9UF47 199 aa11.25□□□□□ -0.61
LINC00511-208ENST00000580199 C1QBPQ07021 282 aaKnown RBP11.2□□□□□ -0.62
LINC00511-208ENST00000580199 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.2□□□□□ -0.62
LINC00511-208ENST00000580199 KCNA4P22459 653 aa11.16□□□□□ -0.62
LINC00511-208ENST00000580199 U3KPZ7 1027 aaPredicted RBP10.89□□□□□ -0.67
LINC00511-208ENST00000580199 CAPN15O75808 1086 aa10.78□□□□□ -0.68
LINC00511-208ENST00000580199 SLC4A2P04920 1241 aa10.77□□□□□ -0.69
LINC00511-208ENST00000580199 APLP2Q06481 763 aa10.74□□□□□ -0.69
LINC00511-208ENST00000580199 SPINK5Q9NQ38 1064 aaPredicted RBP10.72□□□□□ -0.69
LINC00511-208ENST00000580199 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.7□□□□□ -0.7
LINC00511-208ENST00000580199 HNRNPUL2Q1KMD3 747 aaKnown RBP10.7□□□□□ -0.7
LINC00511-208ENST00000580199 DSG3P32926 999 aa10.62□□□□□ -0.71
LINC00511-208ENST00000580199 SAMD1Q6SPF0 538 aaPredicted RBP10.62□□□□□ -0.71
LINC00511-208ENST00000580199 TRHP20396 242 aaPredicted RBP10.61□□□□□ -0.71
LINC00511-208ENST00000580199 ZNF219Q9P2Y4 722 aaPredicted RBP10.61□□□□□ -0.71
LINC00511-208ENST00000580199 SLC4A1APQ9BWU0 796 aaKnown RBP10.6□□□□□ -0.71
LINC00511-208ENST00000580199 MYCNP04198 464 aaPredicted RBP10.55□□□□□ -0.72
LINC00511-208ENST00000580199 POTEHQ6S545 545 aa10.53□□□□□ -0.72
LINC00511-208ENST00000580199 ABCB7O75027 752 aa10.51□□□□□ -0.73
LINC00511-208ENST00000580199 FOXD4L1Q9NU39 408 aa10.45□□□□□ -0.74
LINC00511-208ENST00000580199 POLA2Q14181 598 aa10.3□□□□□ -0.76
LINC00511-208ENST00000580199 RBM42Q9BTD8 480 aaKnown RBP10.24□□□□□ -0.77
LINC00511-208ENST00000580199 ZBTB22O15209 634 aa10.22□□□□□ -0.77
LINC00511-208ENST00000580199 ATF5Q9Y2D1 282 aaPredicted RBP10.2□□□□□ -0.78
LINC00511-208ENST00000580199 ZBTB12Q9Y330 459 aaPredicted RBP10.17□□□□□ -0.78
LINC00511-208ENST00000580199 ATXN8OSP0DMR3 200 aa10.12□□□□□ -0.79
LINC00511-208ENST00000580199 OSCARQ8IYS5 282 aa9.98□□□□□ -0.81
LINC00511-208ENST00000580199 AKT1S1Q96B36 256 aa9.96□□□□□ -0.82
LINC00511-208ENST00000580199 FBLN2P98095 1184 aa9.95□□□□□ -0.82
LINC00511-208ENST00000580199 CHRDL2Q6WN34 429 aa9.94□□□□□ -0.82
LINC00511-208ENST00000580199 REM2Q8IYK8 340 aaPredicted RBP9.84□□□□□ -0.83
LINC00511-208ENST00000580199 SPDYE2BA6NHP3 402 aa9.82□□□□□ -0.84
LINC00511-208ENST00000580199 SPDYE6P0CI01 402 aa9.82□□□□□ -0.84
LINC00511-208ENST00000580199 SPDYE2Q495Y8 402 aa9.82□□□□□ -0.84
LINC00511-208ENST00000580199 CSRNP3Q8WYN3 585 aa9.81□□□□□ -0.84
LINC00511-208ENST00000580199 EHMT2Q96KQ7 1210 aa9.81□□□□□ -0.84
LINC00511-208ENST00000580199 PITPNM1O00562 1244 aa9.74□□□□□ -0.85
LINC00511-208ENST00000580199 MKRN4PQ13434 485 aaPredicted RBP9.74□□□□□ -0.85
LINC00511-208ENST00000580199 ZNF692Q9BU19 519 aaPredicted RBP9.71□□□□□ -0.86
LINC00511-208ENST00000580199 SP7Q8TDD2 431 aaPredicted RBP9.7□□□□□ -0.86
LINC00511-208ENST00000580199 PIP4P2Q8N4L2 257 aa9.68□□□□□ -0.86
LINC00511-208ENST00000580199 SPDYE1Q8NFV5 336 aaPredicted RBP9.65□□□□□ -0.86
LINC00511-208ENST00000580199 CLEC11AQ9Y240 323 aa9.65□□□□□ -0.86
LINC00511-208ENST00000580199 SSUH2Q9Y2M2 353 aa9.63□□□□□ -0.87
LINC00511-208ENST00000580199 FXR2P51116 673 aaKnown RBP eCLIP9.62□□□□□ -0.87
LINC00511-208ENST00000580199 HAX1O00165 279 aa9.56□□□□□ -0.88
LINC00511-208ENST00000580199 PABPN1Q86U42 306 aaKnown RBP eCLIP9.56□□□□□ -0.88
LINC00511-208ENST00000580199 PRKAR2AP13861 404 aaKnown RBP9.52□□□□□ -0.89
LINC00511-208ENST00000580199 PRR29P0C7W0 189 aa9.48□□□□□ -0.89
LINC00511-208ENST00000580199 CHADLQ6NUI6 762 aa9.4□□□□□ -0.9
LINC00511-208ENST00000580199 SPDYE4A6NLX3 237 aa9.39□□□□□ -0.91
LINC00511-208ENST00000580199 STAG3Q9UJ98 1225 aa9.35□□□□□ -0.91
LINC00511-208ENST00000580199 C19orf67A6NJJ6 358 aa9.31□□□□□ -0.92
LINC00511-208ENST00000580199 EVX2Q03828 476 aa9.31□□□□□ -0.92
LINC00511-208ENST00000580199 FARP1Q9Y4F1 1045 aaPredicted RBP9.27□□□□□ -0.93
LINC00511-208ENST00000580199 CD44P16070 742 aaKnown RBP9.23□□□□□ -0.93
LINC00511-208ENST00000580199 CREBZFQ9NS37 354 aa9.18□□□□□ -0.94
LINC00511-208ENST00000580199 GABBR2O75899 941 aa9.17□□□□□ -0.94
LINC00511-208ENST00000580199 PAK3O75914 559 aaPredicted RBP9.13□□□□□ -0.95
LINC00511-208ENST00000580199 NPM1P06748 294 aaKnown RBP eCLIP9.12□□□□□ -0.95
LINC00511-208ENST00000580199 CLCN6P51797 869 aa9.11□□□□□ -0.95
LINC00511-208ENST00000580199 ZRANB1Q9UGI0 708 aa9.11□□□□□ -0.95
LINC00511-208ENST00000580199 LHX8Q68G74 356 aa9.09□□□□□ -0.95
LINC00511-208ENST00000580199 PROM2Q8N271 834 aa9.08□□□□□ -0.96
LINC00511-208ENST00000580199 PLEKHG5O94827 1062 aa9.06□□□□□ -0.96
LINC00511-208ENST00000580199 ZNF579Q8NAF0 562 aaKnown RBP9.06□□□□□ -0.96
LINC00511-208ENST00000580199 DCBLD2Q96PD2 775 aa9.02□□□□□ -0.97
LINC00511-208ENST00000580199 MNX1P50219 401 aaPredicted RBP8.99□□□□□ -0.97
LINC00511-208ENST00000580199 FKBP8Q14318 412 aa8.98□□□□□ -0.97
LINC00511-208ENST00000580199 MIER1Q8N108 512 aa8.98□□□□□ -0.97
LINC00511-208ENST00000580199 PHF12Q96QT6 1004 aa8.96□□□□□ -0.98
LINC00511-208ENST00000580199 PLCD3Q8N3E9 789 aa8.94□□□□□ -0.98
LINC00511-208ENST00000580199 GALR2O43603 387 aaPredicted RBP8.93□□□□□ -0.98
LINC00511-208ENST00000580199 POTEIP0CG38 1075 aa8.92□□□□□ -0.98
LINC00511-208ENST00000580199 TSPYL2Q9H2G4 693 aaPredicted RBP8.92□□□□□ -0.98
LINC00511-208ENST00000580199 ZBTB47Q9UFB7 747 aaPredicted RBP8.89□□□□□ -0.99
LINC00511-208ENST00000580199 MS4A3Q96HJ5 214 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms