RNA–Protein interactions for RNA: ENST00000579974.1

NCOR1-218, Transcript of nuclear receptor corepressor 1, humanhuman

TSL 1 (best)

Gene NCOR1, Length 406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOR1-218ENST00000579974 AEBP2Q6ZN18 517 aaPredicted RBP22.26■■□□□ 1.15
NCOR1-218ENST00000579974 CHIC1Q5VXU3 224 aa20.98■□□□□ 0.95
NCOR1-218ENST00000579974 SENP3Q9H4L4 574 aaPredicted RBP19.27■□□□□ 0.68
NCOR1-218ENST00000579974 PHF23Q9BUL5 403 aaPredicted RBP18.82■□□□□ 0.6
NCOR1-218ENST00000579974 FOXD1Q16676 465 aa17.9■□□□□ 0.46
NCOR1-218ENST00000579974 POTEDQ86YR6 584 aa17.63■□□□□ 0.41
NCOR1-218ENST00000579974 MSH5O43196 834 aa17.15■□□□□ 0.34
NCOR1-218ENST00000579974 PIAS4Q8N2W9 510 aaPredicted RBP16.61■□□□□ 0.25
NCOR1-218ENST00000579974 PLPPR3Q6T4P5 718 aa16.29■□□□□ 0.2
NCOR1-218ENST00000579974 PPP6R1Q9UPN7 881 aa16.18■□□□□ 0.18
NCOR1-218ENST00000579974 ADRA2BP18089 450 aa16.1■□□□□ 0.17
NCOR1-218ENST00000579974 DMRT2Q9Y5R5 561 aa15.15■□□□□ 0.02
NCOR1-218ENST00000579974 CACNB1Q02641 598 aaPredicted RBP14.98□□□□□ -0.01
NCOR1-218ENST00000579974 SCAF1Q9H7N4 1312 aaKnown RBP14.96□□□□□ -0.01
NCOR1-218ENST00000579974 MAPK8IP2Q13387 824 aaPredicted RBP14.93□□□□□ -0.02
NCOR1-218ENST00000579974 RNF39Q9H2S5 420 aa14.5□□□□□ -0.09
NCOR1-218ENST00000579974 DCAF8L1A6NGE4 600 aa14.44□□□□□ -0.1
NCOR1-218ENST00000579974 HOXD11P31277 338 aaPredicted RBP14.37□□□□□ -0.11
NCOR1-218ENST00000579974 C1QBPQ07021 282 aaKnown RBP14.33□□□□□ -0.12
NCOR1-218ENST00000579974 DNAJC5BQ9UF47 199 aa14.15□□□□□ -0.14
NCOR1-218ENST00000579974 PPP4R3CPQ6ZMV5 832 aa14.11□□□□□ -0.15
NCOR1-218ENST00000579974 RNF216Q9NWF9 866 aaPredicted RBP14.11□□□□□ -0.15
NCOR1-218ENST00000579974 CNKSR2Q8WXI2 1034 aa14.06□□□□□ -0.16
NCOR1-218ENST00000579974 POTEHQ6S545 545 aa13.73□□□□□ -0.21
NCOR1-218ENST00000579974 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.63□□□□□ -0.232e-7■□□□□ 10.9
NCOR1-218ENST00000579974 NCBP3Q53F19 620 aaKnown RBP13.5□□□□□ -0.25
NCOR1-218ENST00000579974 DSG3P32926 999 aa13.34□□□□□ -0.27
NCOR1-218ENST00000579974 U3KPZ7 1027 aaPredicted RBP13.26□□□□□ -0.29
NCOR1-218ENST00000579974 CAPN15O75808 1086 aa13.25□□□□□ -0.29
NCOR1-218ENST00000579974 NPM3O75607 178 aaKnown RBP13.18□□□□□ -0.3
NCOR1-218ENST00000579974 SPINK5Q9NQ38 1064 aaPredicted RBP13.18□□□□□ -0.3
NCOR1-218ENST00000579974 APLP2Q06481 763 aa13.05□□□□□ -0.32
NCOR1-218ENST00000579974 ZNF219Q9P2Y4 722 aaPredicted RBP12.97□□□□□ -0.33
NCOR1-218ENST00000579974 RBM42Q9BTD8 480 aaKnown RBP12.89□□□□□ -0.35
NCOR1-218ENST00000579974 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.85□□□□□ -0.35
NCOR1-218ENST00000579974 TRHP20396 242 aaPredicted RBP12.85□□□□□ -0.35
NCOR1-218ENST00000579974 HNRNPUL2Q1KMD3 747 aaKnown RBP12.85□□□□□ -0.35
NCOR1-218ENST00000579974 ABCB7O75027 752 aa12.81□□□□□ -0.36
NCOR1-218ENST00000579974 CHRDL2Q6WN34 429 aa12.73□□□□□ -0.37
NCOR1-218ENST00000579974 SLC4A2P04920 1241 aa12.71□□□□□ -0.37
NCOR1-218ENST00000579974 SAMD1Q6SPF0 538 aaPredicted RBP12.69□□□□□ -0.38
NCOR1-218ENST00000579974 SP7Q8TDD2 431 aaPredicted RBP12.61□□□□□ -0.39
NCOR1-218ENST00000579974 AKT1S1Q96B36 256 aa12.41□□□□□ -0.42
NCOR1-218ENST00000579974 POLA2Q14181 598 aa12.39□□□□□ -0.43
NCOR1-218ENST00000579974 KCNA4P22459 653 aa12.32□□□□□ -0.44
NCOR1-218ENST00000579974 MYCNP04198 464 aaPredicted RBP12.3□□□□□ -0.44
NCOR1-218ENST00000579974 ZBTB12Q9Y330 459 aaPredicted RBP12.29□□□□□ -0.44
NCOR1-218ENST00000579974 PIP4P2Q8N4L2 257 aa12.26□□□□□ -0.45
NCOR1-218ENST00000579974 REM2Q8IYK8 340 aaPredicted RBP12.21□□□□□ -0.45
NCOR1-218ENST00000579974 HAX1O00165 279 aa12.2□□□□□ -0.46
NCOR1-218ENST00000579974 FXR2P51116 673 aaKnown RBP eCLIP12.14□□□□□ -0.47
NCOR1-218ENST00000579974 PITPNM1O00562 1244 aa12.07□□□□□ -0.48
NCOR1-218ENST00000579974 OSCARQ8IYS5 282 aa12.02□□□□□ -0.49
NCOR1-218ENST00000579974 EVX2Q03828 476 aa11.89□□□□□ -0.51
NCOR1-218ENST00000579974 ATF5Q9Y2D1 282 aaPredicted RBP11.87□□□□□ -0.51
NCOR1-218ENST00000579974 FOXD4L1Q9NU39 408 aa11.81□□□□□ -0.52
NCOR1-218ENST00000579974 SPDYE2BA6NHP3 402 aa11.79□□□□□ -0.52
NCOR1-218ENST00000579974 SPDYE6P0CI01 402 aa11.79□□□□□ -0.52
NCOR1-218ENST00000579974 SPDYE2Q495Y8 402 aa11.79□□□□□ -0.52
NCOR1-218ENST00000579974 LHX8Q68G74 356 aa11.78□□□□□ -0.52
NCOR1-218ENST00000579974 C19orf67A6NJJ6 358 aa11.77□□□□□ -0.53
NCOR1-218ENST00000579974 PRKAR2AP13861 404 aaKnown RBP11.75□□□□□ -0.53
NCOR1-218ENST00000579974 SPDYE1Q8NFV5 336 aaPredicted RBP11.72□□□□□ -0.53
NCOR1-218ENST00000579974 GABBR2O75899 941 aa11.7□□□□□ -0.54
NCOR1-218ENST00000579974 FBLN2P98095 1184 aa11.64□□□□□ -0.55
NCOR1-218ENST00000579974 CLEC11AQ9Y240 323 aa11.61□□□□□ -0.55
NCOR1-218ENST00000579974 ATXN8OSP0DMR3 200 aa11.6□□□□□ -0.55
NCOR1-218ENST00000579974 SLC4A1APQ9BWU0 796 aaKnown RBP11.57□□□□□ -0.56
NCOR1-218ENST00000579974 CLCN6P51797 869 aa11.55□□□□□ -0.56
NCOR1-218ENST00000579974 SSUH2Q9Y2M2 353 aa11.53□□□□□ -0.56
NCOR1-218ENST00000579974 ZNF692Q9BU19 519 aaPredicted RBP11.47□□□□□ -0.57
NCOR1-218ENST00000579974 PLSCR2Q9NRY7 297 aa11.47□□□□□ -0.57
NCOR1-218ENST00000579974 CHADLQ6NUI6 762 aa11.41□□□□□ -0.58
NCOR1-218ENST00000579974 PRR29P0C7W0 189 aa11.4□□□□□ -0.58
NCOR1-218ENST00000579974 POTEIP0CG38 1075 aa11.39□□□□□ -0.59
NCOR1-218ENST00000579974 CD44P16070 742 aaKnown RBP11.37□□□□□ -0.59
NCOR1-218ENST00000579974 MKRN4PQ13434 485 aaPredicted RBP11.34□□□□□ -0.59
NCOR1-218ENST00000579974 DCBLD2Q96PD2 775 aa11.3□□□□□ -0.6
NCOR1-218ENST00000579974 ZBTB22O15209 634 aa11.28□□□□□ -0.6
NCOR1-218ENST00000579974 FARP1Q9Y4F1 1045 aaPredicted RBP11.28□□□□□ -0.6
NCOR1-218ENST00000579974 PABPN1Q86U42 306 aaKnown RBP eCLIP11.26□□□□□ -0.61
NCOR1-218ENST00000579974 ZNF579Q8NAF0 562 aaKnown RBP11.22□□□□□ -0.61
NCOR1-218ENST00000579974 PCDH10Q9P2E7 1040 aa11.15□□□□□ -0.62
NCOR1-218ENST00000579974 OTUD5Q96G74 571 aa11.13□□□□□ -0.63
NCOR1-218ENST00000579974 POTEMA6NI47 508 aa11.12□□□□□ -0.63
NCOR1-218ENST00000579974 ZRANB1Q9UGI0 708 aa11.08□□□□□ -0.64
NCOR1-218ENST00000579974 POTEGQ6S5H5 508 aa11.06□□□□□ -0.64
NCOR1-218ENST00000579974 GALR2O43603 387 aaPredicted RBP11.01□□□□□ -0.65
NCOR1-218ENST00000579974 POTEB2H3BUK9 544 aa10.98□□□□□ -0.65
NCOR1-218ENST00000579974 PAK3O75914 559 aaPredicted RBP10.98□□□□□ -0.65
NCOR1-218ENST00000579974 STAG3Q9UJ98 1225 aa10.97□□□□□ -0.65
NCOR1-218ENST00000579974 CREBZFQ9NS37 354 aa10.93□□□□□ -0.66
NCOR1-218ENST00000579974 MAMSTRQ6ZN01 415 aa10.92□□□□□ -0.66
NCOR1-218ENST00000579974 C7P10643 843 aa10.85□□□□□ -0.67
NCOR1-218ENST00000579974 SLC39A7Q92504 469 aa10.85□□□□□ -0.67
NCOR1-218ENST00000579974 ASTLQ6HA08 431 aaPredicted RBP10.84□□□□□ -0.67
NCOR1-218ENST00000579974 METRNQ9UJH8 293 aa10.84□□□□□ -0.67
NCOR1-218ENST00000579974 NPM1P06748 294 aaKnown RBP eCLIP10.83□□□□□ -0.68
NCOR1-218ENST00000579974 PHF12Q96QT6 1004 aa10.83□□□□□ -0.68
NCOR1-218ENST00000579974 PELP1Q8IZL8 1130 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms