RNA–Protein interactions for RNA: ENST00000579871.1

GID4-205, Transcript of GID complex subunit 4 homolog, humanhuman

TSL 5

Gene GID4, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GID4-205ENST00000579871 CHIC1Q5VXU3 224 aa27.39■■□□□ 1.98
GID4-205ENST00000579871 AEBP2Q6ZN18 517 aaPredicted RBP27.3■■□□□ 1.96
GID4-205ENST00000579871 PHF23Q9BUL5 403 aaPredicted RBP24.15■■□□□ 1.46
GID4-205ENST00000579871 SENP3Q9H4L4 574 aaPredicted RBP23.1■■□□□ 1.29
GID4-205ENST00000579871 PLPPR3Q6T4P5 718 aa22.59■■□□□ 1.21
GID4-205ENST00000579871 FOXD1Q16676 465 aa21.33■■□□□ 1.01
GID4-205ENST00000579871 ADRA2BP18089 450 aa21.14■□□□□ 0.97
GID4-205ENST00000579871 PPP6R1Q9UPN7 881 aa21.08■□□□□ 0.97
GID4-205ENST00000579871 KCNA4P22459 653 aa20.34■□□□□ 0.85
GID4-205ENST00000579871 PIAS4Q8N2W9 510 aaPredicted RBP20.33■□□□□ 0.85
GID4-205ENST00000579871 PPP4R3CPQ6ZMV5 832 aa20■□□□□ 0.79
GID4-205ENST00000579871 EHMT2Q96KQ7 1210 aa19.82■□□□□ 0.76
GID4-205ENST00000579871 NCBP3Q53F19 620 aaKnown RBP19.72■□□□□ 0.75
GID4-205ENST00000579871 SLC4A1APQ9BWU0 796 aaKnown RBP19.53■□□□□ 0.72
GID4-205ENST00000579871 MSH5O43196 834 aa19.4■□□□□ 0.7
GID4-205ENST00000579871 SCAF1Q9H7N4 1312 aaKnown RBP19.37■□□□□ 0.69
GID4-205ENST00000579871 NPM3O75607 178 aaKnown RBP19.37■□□□□ 0.69
GID4-205ENST00000579871 CNKSR2Q8WXI2 1034 aa19.28■□□□□ 0.68
GID4-205ENST00000579871 CSRNP3Q8WYN3 585 aa19.21■□□□□ 0.67
GID4-205ENST00000579871 POTEDQ86YR6 584 aa19.16■□□□□ 0.66
GID4-205ENST00000579871 MAPK8IP2Q13387 824 aaPredicted RBP18.96■□□□□ 0.63
GID4-205ENST00000579871 RNF216Q9NWF9 866 aaPredicted RBP18.7■□□□□ 0.58
GID4-205ENST00000579871 ZBTB22O15209 634 aa18.69■□□□□ 0.58
GID4-205ENST00000579871 DNAJC5BQ9UF47 199 aa18.63■□□□□ 0.57
GID4-205ENST00000579871 DMRT2Q9Y5R5 561 aa18.53■□□□□ 0.56
GID4-205ENST00000579871 FOXD4L1Q9NU39 408 aa18.52■□□□□ 0.56
GID4-205ENST00000579871 HOXD11P31277 338 aaPredicted RBP18.42■□□□□ 0.54
GID4-205ENST00000579871 SLC4A2P04920 1241 aa18.1■□□□□ 0.49
GID4-205ENST00000579871 MYCNP04198 464 aaPredicted RBP17.91■□□□□ 0.46
GID4-205ENST00000579871 ATXN8OSP0DMR3 200 aa17.8■□□□□ 0.44
GID4-205ENST00000579871 DCAF8L1A6NGE4 600 aa17.79■□□□□ 0.44
GID4-205ENST00000579871 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.64■□□□□ 0.41
GID4-205ENST00000579871 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.44■□□□□ 0.38
GID4-205ENST00000579871 HNRNPUL2Q1KMD3 747 aaKnown RBP17.44■□□□□ 0.38
GID4-205ENST00000579871 SAMD1Q6SPF0 538 aaPredicted RBP17.4■□□□□ 0.38
GID4-205ENST00000579871 FKBP8Q14318 412 aa17.37■□□□□ 0.37
GID4-205ENST00000579871 U3KPZ7 1027 aaPredicted RBP17.37■□□□□ 0.37
GID4-205ENST00000579871 ATF5Q9Y2D1 282 aaPredicted RBP17.35■□□□□ 0.37
GID4-205ENST00000579871 APLP2Q06481 763 aa17.11■□□□□ 0.33
GID4-205ENST00000579871 AMER1Q5JTC6 1135 aaPredicted RBP17.09■□□□□ 0.33
GID4-205ENST00000579871 RTN4Q9NQC3 1192 aaKnown RBP17.05■□□□□ 0.32
GID4-205ENST00000579871 ZNF219Q9P2Y4 722 aaPredicted RBP17.02■□□□□ 0.32
GID4-205ENST00000579871 TRHP20396 242 aaPredicted RBP16.73■□□□□ 0.27
GID4-205ENST00000579871 SPINK5Q9NQ38 1064 aaPredicted RBP16.68■□□□□ 0.26
GID4-205ENST00000579871 RNF39Q9H2S5 420 aa16.67■□□□□ 0.26
GID4-205ENST00000579871 SPDYE4A6NLX3 237 aa16.65■□□□□ 0.26
GID4-205ENST00000579871 FBLN2P98095 1184 aa16.64■□□□□ 0.25
GID4-205ENST00000579871 CAPN15O75808 1086 aa16.63■□□□□ 0.25
GID4-205ENST00000579871 MKRN4PQ13434 485 aaPredicted RBP16.62■□□□□ 0.25
GID4-205ENST00000579871 SLC24A1O60721 1099 aa16.6■□□□□ 0.25
GID4-205ENST00000579871 POLA2Q14181 598 aa16.6■□□□□ 0.25
GID4-205ENST00000579871 FBXO3Q9UK99 471 aa16.56■□□□□ 0.24
GID4-205ENST00000579871 C1QBPQ07021 282 aaKnown RBP16.54■□□□□ 0.24
GID4-205ENST00000579871 PROM2Q8N271 834 aa16.39■□□□□ 0.21
GID4-205ENST00000579871 ZBTB12Q9Y330 459 aaPredicted RBP16.38■□□□□ 0.21
GID4-205ENST00000579871 ABCB7O75027 752 aa16.37■□□□□ 0.21
GID4-205ENST00000579871 VASPP50552 380 aaPredicted RBP16.29■□□□□ 0.2
GID4-205ENST00000579871 CACNB1Q02641 598 aaPredicted RBP16.27■□□□□ 0.2
GID4-205ENST00000579871 DSG3P32926 999 aa16.13■□□□□ 0.17
GID4-205ENST00000579871 IFNLR1Q8IU57 520 aaPredicted RBP16.1■□□□□ 0.17
GID4-205ENST00000579871 ZNF692Q9BU19 519 aaPredicted RBP16.07■□□□□ 0.16
GID4-205ENST00000579871 SPDYE2BA6NHP3 402 aa15.99■□□□□ 0.15
GID4-205ENST00000579871 SPDYE6P0CI01 402 aa15.99■□□□□ 0.15
GID4-205ENST00000579871 SPDYE2Q495Y8 402 aa15.99■□□□□ 0.15
GID4-205ENST00000579871 OSCARQ8IYS5 282 aa15.99■□□□□ 0.15
GID4-205ENST00000579871 KLHL34Q8N239 644 aa15.92■□□□□ 0.14
GID4-205ENST00000579871 STAG3Q9UJ98 1225 aa15.92■□□□□ 0.14
GID4-205ENST00000579871 DCAF8L2P0C7V8 631 aa15.9■□□□□ 0.14
GID4-205ENST00000579871 SSUH2Q9Y2M2 353 aa15.9■□□□□ 0.14
GID4-205ENST00000579871 PABPN1Q86U42 306 aaKnown RBP eCLIP15.86■□□□□ 0.13
GID4-205ENST00000579871 SPOCK2Q92563 424 aa15.84■□□□□ 0.13
GID4-205ENST00000579871 PKD2Q13563 968 aa15.83■□□□□ 0.12
GID4-205ENST00000579871 PLCD3Q8N3E9 789 aa15.82■□□□□ 0.12
GID4-205ENST00000579871 PLCB2Q00722 1185 aa15.76■□□□□ 0.11
GID4-205ENST00000579871 MIER1Q8N108 512 aa15.76■□□□□ 0.11
GID4-205ENST00000579871 ECM2O94769 699 aaPredicted RBP15.67■□□□□ 0.1
GID4-205ENST00000579871 PLEKHG5O94827 1062 aa15.64■□□□□ 0.09
GID4-205ENST00000579871 HAP1P54257 671 aaPredicted RBP15.6■□□□□ 0.09
GID4-205ENST00000579871 ZBTB47Q9UFB7 747 aaPredicted RBP15.57■□□□□ 0.08
GID4-205ENST00000579871 CIZ1Q9ULV3 898 aaPredicted RBP15.5■□□□□ 0.07
GID4-205ENST00000579871 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.49■□□□□ 0.07
GID4-205ENST00000579871 BBXQ8WY36 941 aaPredicted RBP15.46■□□□□ 0.07
GID4-205ENST00000579871 RGL2O15211 777 aa15.45■□□□□ 0.06
GID4-205ENST00000579871 NPM1P06748 294 aaKnown RBP eCLIP15.4■□□□□ 0.06
GID4-205ENST00000579871 RBM42Q9BTD8 480 aaKnown RBP15.38■□□□□ 0.05
GID4-205ENST00000579871 SPDYE1Q8NFV5 336 aaPredicted RBP15.36■□□□□ 0.05
GID4-205ENST00000579871 PAXIP1Q6ZW49 1069 aaPredicted RBP15.35■□□□□ 0.05
GID4-205ENST00000579871 AKT1S1Q96B36 256 aa15.34■□□□□ 0.05
GID4-205ENST00000579871 VSIG10Q8N0Z9 540 aa15.33■□□□□ 0.04
GID4-205ENST00000579871 TRIM41Q8WV44 630 aa15.33■□□□□ 0.04
GID4-205ENST00000579871 CFAP44Q96MT7 982 aa15.33■□□□□ 0.04
GID4-205ENST00000579871 CLEC11AQ9Y240 323 aa15.29■□□□□ 0.04
GID4-205ENST00000579871 GSE1Q14687 1217 aa15.28■□□□□ 0.04
GID4-205ENST00000579871 CHGAP10645 457 aaKnown RBP15.27■□□□□ 0.04
GID4-205ENST00000579871 PRR29P0C7W0 189 aa15.25■□□□□ 0.03
GID4-205ENST00000579871 SPRYD3Q8NCJ5 442 aa15.24■□□□□ 0.03
GID4-205ENST00000579871 DCAF8Q5TAQ9 597 aa15.21■□□□□ 0.03
GID4-205ENST00000579871 NUBP1P53384 320 aa15.2■□□□□ 0.02
GID4-205ENST00000579871 REM2Q8IYK8 340 aaPredicted RBP15.19■□□□□ 0.02
GID4-205ENST00000579871 BCANQ96GW7 911 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms