RNA–Protein interactions for RNA: ENST00000579631.1

LINC00511-206, long intergenic non-protein coding RNA 511, humanhuman

TSL 2

Gene LINC00511, Length 355 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00511-206ENST00000579631 AEBP2Q6ZN18 517 aaPredicted RBP25.8■■□□□ 1.72
LINC00511-206ENST00000579631 CHIC1Q5VXU3 224 aa24.24■■□□□ 1.47
LINC00511-206ENST00000579631 SENP3Q9H4L4 574 aaPredicted RBP21.88■■□□□ 1.09
LINC00511-206ENST00000579631 PHF23Q9BUL5 403 aaPredicted RBP21.64■■□□□ 1.05
LINC00511-206ENST00000579631 FOXD1Q16676 465 aa20.51■□□□□ 0.87
LINC00511-206ENST00000579631 PLPPR3Q6T4P5 718 aa19.23■□□□□ 0.67
LINC00511-206ENST00000579631 MSH5O43196 834 aa19.14■□□□□ 0.65
LINC00511-206ENST00000579631 PPP6R1Q9UPN7 881 aa19.11■□□□□ 0.65
LINC00511-206ENST00000579631 POTEDQ86YR6 584 aa19.08■□□□□ 0.64
LINC00511-206ENST00000579631 PIAS4Q8N2W9 510 aaPredicted RBP19.05■□□□□ 0.64
LINC00511-206ENST00000579631 ADRA2BP18089 450 aa18.99■□□□□ 0.63
LINC00511-206ENST00000579631 MAPK8IP2Q13387 824 aaPredicted RBP17.52■□□□□ 0.4
LINC00511-206ENST00000579631 DMRT2Q9Y5R5 561 aa17.37■□□□□ 0.37
LINC00511-206ENST00000579631 SCAF1Q9H7N4 1312 aaKnown RBP17.21■□□□□ 0.34
LINC00511-206ENST00000579631 PPP4R3CPQ6ZMV5 832 aa16.88■□□□□ 0.29
LINC00511-206ENST00000579631 HOXD11P31277 338 aaPredicted RBP16.68■□□□□ 0.26
LINC00511-206ENST00000579631 DCAF8L1A6NGE4 600 aa16.6■□□□□ 0.25
LINC00511-206ENST00000579631 CNKSR2Q8WXI2 1034 aa16.57■□□□□ 0.24
LINC00511-206ENST00000579631 CACNB1Q02641 598 aaPredicted RBP16.55■□□□□ 0.24
LINC00511-206ENST00000579631 RNF216Q9NWF9 866 aaPredicted RBP16.47■□□□□ 0.23
LINC00511-206ENST00000579631 RNF39Q9H2S5 420 aa16.4■□□□□ 0.22
LINC00511-206ENST00000579631 DNAJC5BQ9UF47 199 aa16.09■□□□□ 0.17
LINC00511-206ENST00000579631 C1QBPQ07021 282 aaKnown RBP16.08■□□□□ 0.16
LINC00511-206ENST00000579631 NCBP3Q53F19 620 aaKnown RBP16.08■□□□□ 0.16
LINC00511-206ENST00000579631 NPM3O75607 178 aaKnown RBP15.96■□□□□ 0.15
LINC00511-206ENST00000579631 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.81■□□□□ 0.12
LINC00511-206ENST00000579631 U3KPZ7 1027 aaPredicted RBP15.55■□□□□ 0.08
LINC00511-206ENST00000579631 KCNA4P22459 653 aa15.53■□□□□ 0.08
LINC00511-206ENST00000579631 SPINK5Q9NQ38 1064 aaPredicted RBP15.39■□□□□ 0.05
LINC00511-206ENST00000579631 SLC4A2P04920 1241 aa15.34■□□□□ 0.05
LINC00511-206ENST00000579631 DSG3P32926 999 aa15.31■□□□□ 0.04
LINC00511-206ENST00000579631 CAPN15O75808 1086 aa15.28■□□□□ 0.04
LINC00511-206ENST00000579631 TRHP20396 242 aaPredicted RBP15.01□□□□□ -0.01
LINC00511-206ENST00000579631 ABCB7O75027 752 aa14.97□□□□□ -0.01
LINC00511-206ENST00000579631 ZNF219Q9P2Y4 722 aaPredicted RBP14.94□□□□□ -0.02
LINC00511-206ENST00000579631 APLP2Q06481 763 aa14.91□□□□□ -0.02
LINC00511-206ENST00000579631 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.9□□□□□ -0.02
LINC00511-206ENST00000579631 HNRNPUL2Q1KMD3 747 aaKnown RBP14.9□□□□□ -0.02
LINC00511-206ENST00000579631 POTEHQ6S545 545 aa14.89□□□□□ -0.03
LINC00511-206ENST00000579631 SAMD1Q6SPF0 538 aaPredicted RBP14.84□□□□□ -0.03
LINC00511-206ENST00000579631 MYCNP04198 464 aaPredicted RBP14.7□□□□□ -0.06
LINC00511-206ENST00000579631 POLA2Q14181 598 aa14.59□□□□□ -0.07
LINC00511-206ENST00000579631 SLC4A1APQ9BWU0 796 aaKnown RBP14.56□□□□□ -0.08
LINC00511-206ENST00000579631 ATF5Q9Y2D1 282 aaPredicted RBP14.51□□□□□ -0.09
LINC00511-206ENST00000579631 RBM42Q9BTD8 480 aaKnown RBP14.49□□□□□ -0.09
LINC00511-206ENST00000579631 FOXD4L1Q9NU39 408 aa14.48□□□□□ -0.09
LINC00511-206ENST00000579631 ZBTB22O15209 634 aa14.33□□□□□ -0.12
LINC00511-206ENST00000579631 CHRDL2Q6WN34 429 aa14.31□□□□□ -0.12
LINC00511-206ENST00000579631 AKT1S1Q96B36 256 aa14.18□□□□□ -0.14
LINC00511-206ENST00000579631 ZBTB12Q9Y330 459 aaPredicted RBP14.17□□□□□ -0.14
LINC00511-206ENST00000579631 OSCARQ8IYS5 282 aa14.15□□□□□ -0.14
LINC00511-206ENST00000579631 REM2Q8IYK8 340 aaPredicted RBP14.08□□□□□ -0.16
LINC00511-206ENST00000579631 ATXN8OSP0DMR3 200 aa14.03□□□□□ -0.16
LINC00511-206ENST00000579631 PIP4P2Q8N4L2 257 aa13.97□□□□□ -0.17
LINC00511-206ENST00000579631 PITPNM1O00562 1244 aa13.94□□□□□ -0.18
LINC00511-206ENST00000579631 FXR2P51116 673 aaKnown RBP eCLIP13.87□□□□□ -0.19
LINC00511-206ENST00000579631 SP7Q8TDD2 431 aaPredicted RBP13.86□□□□□ -0.19
LINC00511-206ENST00000579631 MKRN4PQ13434 485 aaPredicted RBP13.82□□□□□ -0.2
LINC00511-206ENST00000579631 SPDYE2BA6NHP3 402 aa13.79□□□□□ -0.2
LINC00511-206ENST00000579631 SPDYE6P0CI01 402 aa13.79□□□□□ -0.2
LINC00511-206ENST00000579631 SPDYE2Q495Y8 402 aa13.79□□□□□ -0.2
LINC00511-206ENST00000579631 FBLN2P98095 1184 aa13.77□□□□□ -0.21
LINC00511-206ENST00000579631 HAX1O00165 279 aa13.7□□□□□ -0.22
LINC00511-206ENST00000579631 EVX2Q03828 476 aa13.66□□□□□ -0.22
LINC00511-206ENST00000579631 SSUH2Q9Y2M2 353 aa13.64□□□□□ -0.23
LINC00511-206ENST00000579631 ZNF692Q9BU19 519 aaPredicted RBP13.6□□□□□ -0.23
LINC00511-206ENST00000579631 SPDYE1Q8NFV5 336 aaPredicted RBP13.57□□□□□ -0.24
LINC00511-206ENST00000579631 CLEC11AQ9Y240 323 aa13.57□□□□□ -0.24
LINC00511-206ENST00000579631 PRKAR2AP13861 404 aaKnown RBP13.55□□□□□ -0.24
LINC00511-206ENST00000579631 CSRNP3Q8WYN3 585 aa13.48□□□□□ -0.25
LINC00511-206ENST00000579631 C19orf67A6NJJ6 358 aa13.42□□□□□ -0.26
LINC00511-206ENST00000579631 PABPN1Q86U42 306 aaKnown RBP eCLIP13.42□□□□□ -0.26
LINC00511-206ENST00000579631 CHADLQ6NUI6 762 aa13.41□□□□□ -0.26
LINC00511-206ENST00000579631 PRR29P0C7W0 189 aa13.32□□□□□ -0.28
LINC00511-206ENST00000579631 GABBR2O75899 941 aa13.26□□□□□ -0.29
LINC00511-206ENST00000579631 FARP1Q9Y4F1 1045 aaPredicted RBP13.15□□□□□ -0.3
LINC00511-206ENST00000579631 EHMT2Q96KQ7 1210 aa13.14□□□□□ -0.31
LINC00511-206ENST00000579631 CD44P16070 742 aaKnown RBP13.1□□□□□ -0.31
LINC00511-206ENST00000579631 POTEIP0CG38 1075 aa13.06□□□□□ -0.32
LINC00511-206ENST00000579631 CREBZFQ9NS37 354 aa13.03□□□□□ -0.32
LINC00511-206ENST00000579631 LHX8Q68G74 356 aa13□□□□□ -0.33
LINC00511-206ENST00000579631 SPDYE4A6NLX3 237 aa12.98□□□□□ -0.33
LINC00511-206ENST00000579631 STAG3Q9UJ98 1225 aa12.93□□□□□ -0.34
LINC00511-206ENST00000579631 ZNF579Q8NAF0 562 aaKnown RBP12.91□□□□□ -0.34
LINC00511-206ENST00000579631 ZRANB1Q9UGI0 708 aa12.89□□□□□ -0.35
LINC00511-206ENST00000579631 CLCN6P51797 869 aa12.88□□□□□ -0.35
LINC00511-206ENST00000579631 MNX1P50219 401 aaPredicted RBP12.82□□□□□ -0.36
LINC00511-206ENST00000579631 GALR2O43603 387 aaPredicted RBP12.8□□□□□ -0.36
LINC00511-206ENST00000579631 DCBLD2Q96PD2 775 aa12.78□□□□□ -0.36
LINC00511-206ENST00000579631 PHF12Q96QT6 1004 aa12.75□□□□□ -0.37
LINC00511-206ENST00000579631 PROM2Q8N271 834 aa12.71□□□□□ -0.37
LINC00511-206ENST00000579631 NPM1P06748 294 aaKnown RBP eCLIP12.66□□□□□ -0.38
LINC00511-206ENST00000579631 PAK3O75914 559 aaPredicted RBP12.64□□□□□ -0.39
LINC00511-206ENST00000579631 POTEB2H3BUK9 544 aa12.63□□□□□ -0.39
LINC00511-206ENST00000579631 PELP1Q8IZL8 1130 aaKnown RBP12.62□□□□□ -0.39
LINC00511-206ENST00000579631 OTUD5Q96G74 571 aa12.57□□□□□ -0.4
LINC00511-206ENST00000579631 MS4A3Q96HJ5 214 aa12.56□□□□□ -0.4
LINC00511-206ENST00000579631 ASTLQ6HA08 431 aaPredicted RBP12.5□□□□□ -0.41
LINC00511-206ENST00000579631 TSPYL2Q9H2G4 693 aaPredicted RBP12.5□□□□□ -0.41
LINC00511-206ENST00000579631 CCDC61Q9Y6R9 512 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms