RNA–Protein interactions for RNA: ENST00000579076.1

GDPD1-204, Transcript of glycerophosphodiester phosphodiesterase domain containing 1, humanhuman

TSL 2

Gene GDPD1, Length 585 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD1-204ENST00000579076 AEBP2Q6ZN18 517 aaPredicted RBP25.8■■□□□ 1.72
GDPD1-204ENST00000579076 CHIC1Q5VXU3 224 aa25.06■■□□□ 1.6
GDPD1-204ENST00000579076 PHF23Q9BUL5 403 aaPredicted RBP22.08■■□□□ 1.13
GDPD1-204ENST00000579076 SENP3Q9H4L4 574 aaPredicted RBP21.95■■□□□ 1.1
GDPD1-204ENST00000579076 PLPPR3Q6T4P5 718 aa20.72■□□□□ 0.91
GDPD1-204ENST00000579076 FOXD1Q16676 465 aa20.61■□□□□ 0.89
GDPD1-204ENST00000579076 POTEDQ86YR6 584 aa19.84■□□□□ 0.77
GDPD1-204ENST00000579076 MSH5O43196 834 aa19.38■□□□□ 0.69
GDPD1-204ENST00000579076 ADRA2BP18089 450 aa19.29■□□□□ 0.68
GDPD1-204ENST00000579076 PPP6R1Q9UPN7 881 aa19.22■□□□□ 0.67
GDPD1-204ENST00000579076 PIAS4Q8N2W9 510 aaPredicted RBP19.05■□□□□ 0.64
GDPD1-204ENST00000579076 KCNA4P22459 653 aa18.73■□□□□ 0.59
GDPD1-204ENST00000579076 PPP4R3CPQ6ZMV5 832 aa18.32■□□□□ 0.52
GDPD1-204ENST00000579076 EHMT2Q96KQ7 1210 aa18.31■□□□□ 0.52
GDPD1-204ENST00000579076 NCBP3Q53F19 620 aaKnown RBP18.12■□□□□ 0.49
GDPD1-204ENST00000579076 SLC4A1APQ9BWU0 796 aaKnown RBP18.01■□□□□ 0.47
GDPD1-204ENST00000579076 NPM3O75607 178 aaKnown RBP17.79■□□□□ 0.44
GDPD1-204ENST00000579076 CSRNP3Q8WYN3 585 aa17.79■□□□□ 0.44
GDPD1-204ENST00000579076 SCAF1Q9H7N4 1312 aaKnown RBP17.72■□□□□ 0.43
GDPD1-204ENST00000579076 CNKSR2Q8WXI2 1034 aa17.67■□□□□ 0.42
GDPD1-204ENST00000579076 MAPK8IP2Q13387 824 aaPredicted RBP17.42■□□□□ 0.38
GDPD1-204ENST00000579076 DMRT2Q9Y5R5 561 aa17.39■□□□□ 0.37
GDPD1-204ENST00000579076 DNAJC5BQ9UF47 199 aa17.26■□□□□ 0.35
GDPD1-204ENST00000579076 ZBTB22O15209 634 aa17.22■□□□□ 0.35
GDPD1-204ENST00000579076 RNF216Q9NWF9 866 aaPredicted RBP17.14■□□□□ 0.33
GDPD1-204ENST00000579076 FOXD4L1Q9NU39 408 aa17.07■□□□□ 0.32
GDPD1-204ENST00000579076 CACNB1Q02641 598 aaPredicted RBP16.9■□□□□ 0.3
GDPD1-204ENST00000579076 HOXD11P31277 338 aaPredicted RBP16.87■□□□□ 0.29
GDPD1-204ENST00000579076 SLC4A2P04920 1241 aa16.6■□□□□ 0.25
GDPD1-204ENST00000579076 RNF39Q9H2S5 420 aa16.56■□□□□ 0.24
GDPD1-204ENST00000579076 DCAF8L1A6NGE4 600 aa16.54■□□□□ 0.24
GDPD1-204ENST00000579076 MYCNP04198 464 aaPredicted RBP16.45■□□□□ 0.22
GDPD1-204ENST00000579076 ATXN8OSP0DMR3 200 aa16.45■□□□□ 0.22
GDPD1-204ENST00000579076 C1QBPQ07021 282 aaKnown RBP16.24■□□□□ 0.19
GDPD1-204ENST00000579076 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.05■□□□□ 0.16
GDPD1-204ENST00000579076 FKBP8Q14318 412 aa16.03■□□□□ 0.16
GDPD1-204ENST00000579076 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.01■□□□□ 0.15
GDPD1-204ENST00000579076 HNRNPUL2Q1KMD3 747 aaKnown RBP16.01■□□□□ 0.15
GDPD1-204ENST00000579076 AMER1Q5JTC6 1135 aaPredicted RBP16.01■□□□□ 0.15
GDPD1-204ENST00000579076 SAMD1Q6SPF0 538 aaPredicted RBP15.96■□□□□ 0.15
GDPD1-204ENST00000579076 RTN4Q9NQC3 1192 aaKnown RBP15.91■□□□□ 0.14
GDPD1-204ENST00000579076 ATF5Q9Y2D1 282 aaPredicted RBP15.88■□□□□ 0.13
GDPD1-204ENST00000579076 U3KPZ7 1027 aaPredicted RBP15.86■□□□□ 0.13
GDPD1-204ENST00000579076 APLP2Q06481 763 aa15.68■□□□□ 0.1
GDPD1-204ENST00000579076 SLC24A1O60721 1099 aa15.66■□□□□ 0.1
GDPD1-204ENST00000579076 ZNF219Q9P2Y4 722 aaPredicted RBP15.6■□□□□ 0.09
GDPD1-204ENST00000579076 POTEHQ6S545 545 aa15.41■□□□□ 0.06
GDPD1-204ENST00000579076 DSG3P32926 999 aa15.34■□□□□ 0.05
GDPD1-204ENST00000579076 FBXO3Q9UK99 471 aa15.33■□□□□ 0.04
GDPD1-204ENST00000579076 SPDYE4A6NLX3 237 aa15.31■□□□□ 0.04
GDPD1-204ENST00000579076 SPINK5Q9NQ38 1064 aaPredicted RBP15.31■□□□□ 0.04
GDPD1-204ENST00000579076 FBLN2P98095 1184 aa15.25■□□□□ 0.03
GDPD1-204ENST00000579076 MKRN4PQ13434 485 aaPredicted RBP15.25■□□□□ 0.03
GDPD1-204ENST00000579076 CAPN15O75808 1086 aa15.2■□□□□ 0.02
GDPD1-204ENST00000579076 TRHP20396 242 aaPredicted RBP15.2■□□□□ 0.02
GDPD1-204ENST00000579076 PROM2Q8N271 834 aa15.19■□□□□ 0.02
GDPD1-204ENST00000579076 POLA2Q14181 598 aa15.15■□□□□ 0.02
GDPD1-204ENST00000579076 VASPP50552 380 aaPredicted RBP15.04■□□□□ -0
GDPD1-204ENST00000579076 ZBTB12Q9Y330 459 aaPredicted RBP15.02■□□□□ -0
GDPD1-204ENST00000579076 IFNLR1Q8IU57 520 aaPredicted RBP14.88□□□□□ -0.03
GDPD1-204ENST00000579076 ABCB7O75027 752 aa14.85□□□□□ -0.03
GDPD1-204ENST00000579076 PLCB2Q00722 1185 aa14.73□□□□□ -0.05
GDPD1-204ENST00000579076 ZNF692Q9BU19 519 aaPredicted RBP14.69□□□□□ -0.06
GDPD1-204ENST00000579076 PKD2Q13563 968 aa14.68□□□□□ -0.06
GDPD1-204ENST00000579076 STAG3Q9UJ98 1225 aa14.67□□□□□ -0.06
GDPD1-204ENST00000579076 SPDYE2BA6NHP3 402 aa14.65□□□□□ -0.06
GDPD1-204ENST00000579076 DCAF8L2P0C7V8 631 aa14.65□□□□□ -0.06
GDPD1-204ENST00000579076 SPDYE6P0CI01 402 aa14.65□□□□□ -0.06
GDPD1-204ENST00000579076 SPDYE2Q495Y8 402 aa14.65□□□□□ -0.06
GDPD1-204ENST00000579076 KLHL34Q8N239 644 aa14.61□□□□□ -0.07
GDPD1-204ENST00000579076 SPOCK2Q92563 424 aa14.61□□□□□ -0.07
GDPD1-204ENST00000579076 SSUH2Q9Y2M2 353 aa14.6□□□□□ -0.07
GDPD1-204ENST00000579076 OSCARQ8IYS5 282 aa14.57□□□□□ -0.08
GDPD1-204ENST00000579076 RBM42Q9BTD8 480 aaKnown RBP14.54□□□□□ -0.08
GDPD1-204ENST00000579076 PLCD3Q8N3E9 789 aa14.51□□□□□ -0.09
GDPD1-204ENST00000579076 PABPN1Q86U42 306 aaKnown RBP eCLIP14.5□□□□□ -0.09
GDPD1-204ENST00000579076 HAP1P54257 671 aaPredicted RBP14.49□□□□□ -0.09
GDPD1-204ENST00000579076 CHRDL2Q6WN34 429 aa14.48□□□□□ -0.09
GDPD1-204ENST00000579076 ECM2O94769 699 aaPredicted RBP14.46□□□□□ -0.09
GDPD1-204ENST00000579076 MIER1Q8N108 512 aa14.44□□□□□ -0.1
GDPD1-204ENST00000579076 BBXQ8WY36 941 aaPredicted RBP14.39□□□□□ -0.11
GDPD1-204ENST00000579076 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.39□□□□□ -0.11
GDPD1-204ENST00000579076 PLEKHG5O94827 1062 aa14.36□□□□□ -0.11
GDPD1-204ENST00000579076 VSIG10Q8N0Z9 540 aa14.36□□□□□ -0.11
GDPD1-204ENST00000579076 ZBTB47Q9UFB7 747 aaPredicted RBP14.36□□□□□ -0.11
GDPD1-204ENST00000579076 RGL2O15211 777 aa14.27□□□□□ -0.13
GDPD1-204ENST00000579076 NPM1P06748 294 aaKnown RBP eCLIP14.26□□□□□ -0.13
GDPD1-204ENST00000579076 BCANQ96GW7 911 aa14.25□□□□□ -0.13
GDPD1-204ENST00000579076 CIZ1Q9ULV3 898 aaPredicted RBP14.22□□□□□ -0.13
GDPD1-204ENST00000579076 PAXIP1Q6ZW49 1069 aaPredicted RBP14.21□□□□□ -0.13
GDPD1-204ENST00000579076 SP7Q8TDD2 431 aaPredicted RBP14.21□□□□□ -0.13
GDPD1-204ENST00000579076 TRIM41Q8WV44 630 aa14.2□□□□□ -0.14
GDPD1-204ENST00000579076 CFAP44Q96MT7 982 aa14.17□□□□□ -0.14
GDPD1-204ENST00000579076 AKT1S1Q96B36 256 aa14.15□□□□□ -0.14
GDPD1-204ENST00000579076 SPRYD3Q8NCJ5 442 aa14.14□□□□□ -0.15
GDPD1-204ENST00000579076 CHGAP10645 457 aaKnown RBP14.09□□□□□ -0.15
GDPD1-204ENST00000579076 GSE1Q14687 1217 aa14.08□□□□□ -0.16
GDPD1-204ENST00000579076 KDM2AQ9Y2K7 1162 aa14.08□□□□□ -0.16
GDPD1-204ENST00000579076 PIP4P2Q8N4L2 257 aa14.07□□□□□ -0.16
GDPD1-204ENST00000579076 REM2Q8IYK8 340 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms