RNA–Protein interactions for RNA: ENST00000579021.1

RTTN-203, Transcript of rotatin, humanhuman

TSL 3

Gene RTTN, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-203ENST00000579021 AEBP2Q6ZN18 517 aaPredicted RBP26.11■■□□□ 1.77
RTTN-203ENST00000579021 CHIC1Q5VXU3 224 aa24.38■■□□□ 1.49
RTTN-203ENST00000579021 SENP3Q9H4L4 574 aaPredicted RBP22.34■■□□□ 1.17
RTTN-203ENST00000579021 PHF23Q9BUL5 403 aaPredicted RBP21.98■■□□□ 1.11
RTTN-203ENST00000579021 FOXD1Q16676 465 aa20.88■□□□□ 0.93
RTTN-203ENST00000579021 POTEDQ86YR6 584 aa20.1■□□□□ 0.81
RTTN-203ENST00000579021 MSH5O43196 834 aa19.73■□□□□ 0.75
RTTN-203ENST00000579021 PIAS4Q8N2W9 510 aaPredicted RBP19.42■□□□□ 0.7
RTTN-203ENST00000579021 PLPPR3Q6T4P5 718 aa19.19■□□□□ 0.66
RTTN-203ENST00000579021 PPP6R1Q9UPN7 881 aa19.15■□□□□ 0.66
RTTN-203ENST00000579021 ADRA2BP18089 450 aa19.07■□□□□ 0.64
RTTN-203ENST00000579021 MAPK8IP2Q13387 824 aaPredicted RBP17.67■□□□□ 0.42
RTTN-203ENST00000579021 DMRT2Q9Y5R5 561 aa17.64■□□□□ 0.41
RTTN-203ENST00000579021 SCAF1Q9H7N4 1312 aaKnown RBP17.42■□□□□ 0.38
RTTN-203ENST00000579021 CACNB1Q02641 598 aaPredicted RBP17.24■□□□□ 0.35
RTTN-203ENST00000579021 DCAF8L1A6NGE4 600 aa16.98■□□□□ 0.31
RTTN-203ENST00000579021 RNF39Q9H2S5 420 aa16.79■□□□□ 0.28
RTTN-203ENST00000579021 HOXD11P31277 338 aaPredicted RBP16.78■□□□□ 0.28
RTTN-203ENST00000579021 PPP4R3CPQ6ZMV5 832 aa16.76■□□□□ 0.27
RTTN-203ENST00000579021 CNKSR2Q8WXI2 1034 aa16.56■□□□□ 0.24
RTTN-203ENST00000579021 RNF216Q9NWF9 866 aaPredicted RBP16.53■□□□□ 0.24
RTTN-203ENST00000579021 C1QBPQ07021 282 aaKnown RBP16.5■□□□□ 0.23
RTTN-203ENST00000579021 DNAJC5BQ9UF47 199 aa16.27■□□□□ 0.2
RTTN-203ENST00000579021 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.02■□□□□ 0.16
RTTN-203ENST00000579021 NCBP3Q53F19 620 aaKnown RBP15.96■□□□□ 0.15
RTTN-203ENST00000579021 NPM3O75607 178 aaKnown RBP15.75■□□□□ 0.11
RTTN-203ENST00000579021 POTEHQ6S545 545 aa15.65■□□□□ 0.1
RTTN-203ENST00000579021 U3KPZ7 1027 aaPredicted RBP15.63■□□□□ 0.09
RTTN-203ENST00000579021 CAPN15O75808 1086 aa15.56■□□□□ 0.08
RTTN-203ENST00000579021 DSG3P32926 999 aa15.56■□□□□ 0.08
RTTN-203ENST00000579021 SPINK5Q9NQ38 1064 aaPredicted RBP15.56■□□□□ 0.08
RTTN-203ENST00000579021 TRHP20396 242 aaPredicted RBP15.2■□□□□ 0.02
RTTN-203ENST00000579021 ABCB7O75027 752 aa15.17■□□□□ 0.02
RTTN-203ENST00000579021 SLC4A2P04920 1241 aa15.17■□□□□ 0.02
RTTN-203ENST00000579021 APLP2Q06481 763 aa15.12■□□□□ 0.01
RTTN-203ENST00000579021 ZNF219Q9P2Y4 722 aaPredicted RBP15.12■□□□□ 0.01
RTTN-203ENST00000579021 KCNA4P22459 653 aa15.02■□□□□ -0
RTTN-203ENST00000579021 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.98□□□□□ -0.01
RTTN-203ENST00000579021 HNRNPUL2Q1KMD3 747 aaKnown RBP14.98□□□□□ -0.01
RTTN-203ENST00000579021 SAMD1Q6SPF0 538 aaPredicted RBP14.88□□□□□ -0.03
RTTN-203ENST00000579021 RBM42Q9BTD8 480 aaKnown RBP14.86□□□□□ -0.03
RTTN-203ENST00000579021 CHRDL2Q6WN34 429 aa14.73□□□□□ -0.05
RTTN-203ENST00000579021 POLA2Q14181 598 aa14.65□□□□□ -0.06
RTTN-203ENST00000579021 MYCNP04198 464 aaPredicted RBP14.57□□□□□ -0.08
RTTN-203ENST00000579021 SP7Q8TDD2 431 aaPredicted RBP14.45□□□□□ -0.1
RTTN-203ENST00000579021 AKT1S1Q96B36 256 aa14.41□□□□□ -0.1
RTTN-203ENST00000579021 ZBTB12Q9Y330 459 aaPredicted RBP14.3□□□□□ -0.12
RTTN-203ENST00000579021 ATF5Q9Y2D1 282 aaPredicted RBP14.29□□□□□ -0.12
RTTN-203ENST00000579021 REM2Q8IYK8 340 aaPredicted RBP14.28□□□□□ -0.12
RTTN-203ENST00000579021 PIP4P2Q8N4L2 257 aa14.28□□□□□ -0.12
RTTN-203ENST00000579021 OSCARQ8IYS5 282 aa14.24□□□□□ -0.13
RTTN-203ENST00000579021 FOXD4L1Q9NU39 408 aa14.17□□□□□ -0.14
RTTN-203ENST00000579021 HAX1O00165 279 aa14.16□□□□□ -0.14
RTTN-203ENST00000579021 PITPNM1O00562 1244 aa14.15□□□□□ -0.14
RTTN-203ENST00000579021 FXR2P51116 673 aaKnown RBP eCLIP14.11□□□□□ -0.15
RTTN-203ENST00000579021 SLC4A1APQ9BWU0 796 aaKnown RBP14.08□□□□□ -0.16
RTTN-203ENST00000579021 EVX2Q03828 476 aa13.95□□□□□ -0.18
RTTN-203ENST00000579021 SPDYE2BA6NHP3 402 aa13.82□□□□□ -0.2
RTTN-203ENST00000579021 SPDYE6P0CI01 402 aa13.82□□□□□ -0.2
RTTN-203ENST00000579021 SPDYE2Q495Y8 402 aa13.82□□□□□ -0.2
RTTN-203ENST00000579021 ZBTB22O15209 634 aa13.8□□□□□ -0.2
RTTN-203ENST00000579021 PRKAR2AP13861 404 aaKnown RBP13.78□□□□□ -0.2
RTTN-203ENST00000579021 FBLN2P98095 1184 aa13.76□□□□□ -0.21
RTTN-203ENST00000579021 ATXN8OSP0DMR3 200 aa13.75□□□□□ -0.21
RTTN-203ENST00000579021 CLEC11AQ9Y240 323 aa13.74□□□□□ -0.21
RTTN-203ENST00000579021 SPDYE1Q8NFV5 336 aaPredicted RBP13.71□□□□□ -0.21
RTTN-203ENST00000579021 C19orf67A6NJJ6 358 aa13.68□□□□□ -0.22
RTTN-203ENST00000579021 GABBR2O75899 941 aa13.6□□□□□ -0.23
RTTN-203ENST00000579021 MKRN4PQ13434 485 aaPredicted RBP13.6□□□□□ -0.23
RTTN-203ENST00000579021 ZNF692Q9BU19 519 aaPredicted RBP13.6□□□□□ -0.23
RTTN-203ENST00000579021 SSUH2Q9Y2M2 353 aa13.59□□□□□ -0.23
RTTN-203ENST00000579021 LHX8Q68G74 356 aa13.55□□□□□ -0.24
RTTN-203ENST00000579021 CHADLQ6NUI6 762 aa13.53□□□□□ -0.24
RTTN-203ENST00000579021 PRR29P0C7W0 189 aa13.42□□□□□ -0.26
RTTN-203ENST00000579021 PABPN1Q86U42 306 aaKnown RBP eCLIP13.38□□□□□ -0.27
RTTN-203ENST00000579021 POTEIP0CG38 1075 aa13.32□□□□□ -0.28
RTTN-203ENST00000579021 CD44P16070 742 aaKnown RBP13.31□□□□□ -0.28
RTTN-203ENST00000579021 FARP1Q9Y4F1 1045 aaPredicted RBP13.26□□□□□ -0.29
RTTN-203ENST00000579021 CLCN6P51797 869 aa13.17□□□□□ -0.3
RTTN-203ENST00000579021 DCBLD2Q96PD2 775 aa13.14□□□□□ -0.31
RTTN-203ENST00000579021 PLSCR2Q9NRY7 297 aa13.11□□□□□ -0.31
RTTN-203ENST00000579021 ZNF579Q8NAF0 562 aaKnown RBP13.08□□□□□ -0.32
RTTN-203ENST00000579021 ZRANB1Q9UGI0 708 aa13.05□□□□□ -0.32
RTTN-203ENST00000579021 CREBZFQ9NS37 354 aa12.98□□□□□ -0.33
RTTN-203ENST00000579021 GALR2O43603 387 aaPredicted RBP12.97□□□□□ -0.33
RTTN-203ENST00000579021 OTUD5Q96G74 571 aa12.91□□□□□ -0.34
RTTN-203ENST00000579021 STAG3Q9UJ98 1225 aa12.88□□□□□ -0.35
RTTN-203ENST00000579021 POTEB2H3BUK9 544 aa12.87□□□□□ -0.35
RTTN-203ENST00000579021 PHF12Q96QT6 1004 aa12.85□□□□□ -0.35
RTTN-203ENST00000579021 PAK3O75914 559 aaPredicted RBP12.83□□□□□ -0.36
RTTN-203ENST00000579021 POTEMA6NI47 508 aa12.79□□□□□ -0.36
RTTN-203ENST00000579021 PELP1Q8IZL8 1130 aaKnown RBP12.76□□□□□ -0.37
RTTN-203ENST00000579021 POTEGQ6S5H5 508 aa12.73□□□□□ -0.37
RTTN-203ENST00000579021 SPDYE4A6NLX3 237 aa12.71□□□□□ -0.37
RTTN-203ENST00000579021 NPM1P06748 294 aaKnown RBP eCLIP12.71□□□□□ -0.37
RTTN-203ENST00000579021 CSRNP3Q8WYN3 585 aa12.71□□□□□ -0.37
RTTN-203ENST00000579021 MNX1P50219 401 aaPredicted RBP12.67□□□□□ -0.38
RTTN-203ENST00000579021 METRNQ9UJH8 293 aa12.67□□□□□ -0.38
RTTN-203ENST00000579021 MS4A3Q96HJ5 214 aa12.65□□□□□ -0.38
RTTN-203ENST00000579021 ASTLQ6HA08 431 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms