RNA–Protein interactions for RNA: ENST00000578816.1

TMX3-213, Transcript of thioredoxin related transmembrane protein 3, humanhuman

TSL 3

Gene TMX3, Length 599 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX3-213ENST00000578816 AEBP2Q6ZN18 517 aaPredicted RBP25.82■■□□□ 1.72
TMX3-213ENST00000578816 CHIC1Q5VXU3 224 aa24.26■■□□□ 1.47
TMX3-213ENST00000578816 SENP3Q9H4L4 574 aaPredicted RBP22.19■■□□□ 1.14
TMX3-213ENST00000578816 PHF23Q9BUL5 403 aaPredicted RBP21.83■■□□□ 1.09
TMX3-213ENST00000578816 FOXD1Q16676 465 aa20.66■□□□□ 0.9
TMX3-213ENST00000578816 POTEDQ86YR6 584 aa19.57■□□□□ 0.72
TMX3-213ENST00000578816 MSH5O43196 834 aa19.53■□□□□ 0.72
TMX3-213ENST00000578816 PIAS4Q8N2W9 510 aaPredicted RBP19.3■□□□□ 0.68
TMX3-213ENST00000578816 PLPPR3Q6T4P5 718 aa19.28■□□□□ 0.68
TMX3-213ENST00000578816 PPP6R1Q9UPN7 881 aa19.04■□□□□ 0.64
TMX3-213ENST00000578816 ADRA2BP18089 450 aa19.01■□□□□ 0.63
TMX3-213ENST00000578816 MAPK8IP2Q13387 824 aaPredicted RBP17.54■□□□□ 0.4
TMX3-213ENST00000578816 DMRT2Q9Y5R5 561 aa17.5■□□□□ 0.39
TMX3-213ENST00000578816 SCAF1Q9H7N4 1312 aaKnown RBP17.49■□□□□ 0.39
TMX3-213ENST00000578816 CACNB1Q02641 598 aaPredicted RBP17.01■□□□□ 0.31
TMX3-213ENST00000578816 DCAF8L1A6NGE4 600 aa16.95■□□□□ 0.3
TMX3-213ENST00000578816 PPP4R3CPQ6ZMV5 832 aa16.84■□□□□ 0.29
TMX3-213ENST00000578816 KCNA4P22459 653 aa16.8■□□□□ 0.28
TMX3-213ENST00000578816 HOXD11P31277 338 aaPredicted RBP16.7■□□□□ 0.26
TMX3-213ENST00000578816 CNKSR2Q8WXI2 1034 aa16.61■□□□□ 0.25
TMX3-213ENST00000578816 RNF39Q9H2S5 420 aa16.57■□□□□ 0.24
TMX3-213ENST00000578816 RNF216Q9NWF9 866 aaPredicted RBP16.52■□□□□ 0.24
TMX3-213ENST00000578816 EHMT2Q96KQ7 1210 aa16.42■□□□□ 0.22
TMX3-213ENST00000578816 C1QBPQ07021 282 aaKnown RBP16.36■□□□□ 0.21
TMX3-213ENST00000578816 DNAJC5BQ9UF47 199 aa16.18■□□□□ 0.18
TMX3-213ENST00000578816 NCBP3Q53F19 620 aaKnown RBP16.17■□□□□ 0.18
TMX3-213ENST00000578816 SLC4A1APQ9BWU0 796 aaKnown RBP16.08■□□□□ 0.16
TMX3-213ENST00000578816 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.04■□□□□ 0.16
TMX3-213ENST00000578816 NPM3O75607 178 aaKnown RBP15.96■□□□□ 0.15
TMX3-213ENST00000578816 CSRNP3Q8WYN3 585 aa15.87■□□□□ 0.13
TMX3-213ENST00000578816 U3KPZ7 1027 aaPredicted RBP15.56■□□□□ 0.08
TMX3-213ENST00000578816 CAPN15O75808 1086 aa15.53■□□□□ 0.08
TMX3-213ENST00000578816 ZBTB22O15209 634 aa15.49■□□□□ 0.07
TMX3-213ENST00000578816 SPINK5Q9NQ38 1064 aaPredicted RBP15.45■□□□□ 0.06
TMX3-213ENST00000578816 DSG3P32926 999 aa15.42■□□□□ 0.06
TMX3-213ENST00000578816 POTEHQ6S545 545 aa15.31■□□□□ 0.04
TMX3-213ENST00000578816 APLP2Q06481 763 aa15.23■□□□□ 0.03
TMX3-213ENST00000578816 FOXD4L1Q9NU39 408 aa15.23■□□□□ 0.03
TMX3-213ENST00000578816 TRHP20396 242 aaPredicted RBP15.21■□□□□ 0.03
TMX3-213ENST00000578816 SLC4A2P04920 1241 aa15.17■□□□□ 0.02
TMX3-213ENST00000578816 ZNF219Q9P2Y4 722 aaPredicted RBP15.13■□□□□ 0.01
TMX3-213ENST00000578816 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.11■□□□□ 0.01
TMX3-213ENST00000578816 ABCB7O75027 752 aa15.11■□□□□ 0.01
TMX3-213ENST00000578816 HNRNPUL2Q1KMD3 747 aaKnown RBP15.11■□□□□ 0.01
TMX3-213ENST00000578816 SAMD1Q6SPF0 538 aaPredicted RBP14.99□□□□□ -0.01
TMX3-213ENST00000578816 RBM42Q9BTD8 480 aaKnown RBP14.81□□□□□ -0.04
TMX3-213ENST00000578816 MYCNP04198 464 aaPredicted RBP14.7□□□□□ -0.06
TMX3-213ENST00000578816 POLA2Q14181 598 aa14.68□□□□□ -0.06
TMX3-213ENST00000578816 ATXN8OSP0DMR3 200 aa14.57□□□□□ -0.08
TMX3-213ENST00000578816 CHRDL2Q6WN34 429 aa14.57□□□□□ -0.08
TMX3-213ENST00000578816 ZBTB12Q9Y330 459 aaPredicted RBP14.39□□□□□ -0.11
TMX3-213ENST00000578816 AKT1S1Q96B36 256 aa14.36□□□□□ -0.11
TMX3-213ENST00000578816 FKBP8Q14318 412 aa14.33□□□□□ -0.12
TMX3-213ENST00000578816 ATF5Q9Y2D1 282 aaPredicted RBP14.33□□□□□ -0.12
TMX3-213ENST00000578816 REM2Q8IYK8 340 aaPredicted RBP14.22□□□□□ -0.13
TMX3-213ENST00000578816 OSCARQ8IYS5 282 aa14.21□□□□□ -0.13
TMX3-213ENST00000578816 SP7Q8TDD2 431 aaPredicted RBP14.19□□□□□ -0.14
TMX3-213ENST00000578816 RTN4Q9NQC3 1192 aaKnown RBP14.18□□□□□ -0.14
TMX3-213ENST00000578816 PIP4P2Q8N4L2 257 aa14.12□□□□□ -0.15
TMX3-213ENST00000578816 AMER1Q5JTC6 1135 aaPredicted RBP14.11□□□□□ -0.15
TMX3-213ENST00000578816 HAX1O00165 279 aa14.07□□□□□ -0.16
TMX3-213ENST00000578816 PITPNM1O00562 1244 aa14.04□□□□□ -0.16
TMX3-213ENST00000578816 FXR2P51116 673 aaKnown RBP eCLIP13.97□□□□□ -0.17
TMX3-213ENST00000578816 FBLN2P98095 1184 aa13.93□□□□□ -0.18
TMX3-213ENST00000578816 SPDYE2BA6NHP3 402 aa13.87□□□□□ -0.19
TMX3-213ENST00000578816 SPDYE6P0CI01 402 aa13.87□□□□□ -0.19
TMX3-213ENST00000578816 SPDYE2Q495Y8 402 aa13.87□□□□□ -0.19
TMX3-213ENST00000578816 SLC24A1O60721 1099 aa13.8□□□□□ -0.2
TMX3-213ENST00000578816 CLEC11AQ9Y240 323 aa13.79□□□□□ -0.2
TMX3-213ENST00000578816 SPDYE1Q8NFV5 336 aaPredicted RBP13.76□□□□□ -0.21
TMX3-213ENST00000578816 PRKAR2AP13861 404 aaKnown RBP13.73□□□□□ -0.21
TMX3-213ENST00000578816 EVX2Q03828 476 aa13.72□□□□□ -0.21
TMX3-213ENST00000578816 MKRN4PQ13434 485 aaPredicted RBP13.72□□□□□ -0.21
TMX3-213ENST00000578816 ZNF692Q9BU19 519 aaPredicted RBP13.7□□□□□ -0.22
TMX3-213ENST00000578816 SPDYE4A6NLX3 237 aa13.68□□□□□ -0.22
TMX3-213ENST00000578816 SSUH2Q9Y2M2 353 aa13.59□□□□□ -0.23
TMX3-213ENST00000578816 FBXO3Q9UK99 471 aa13.56□□□□□ -0.24
TMX3-213ENST00000578816 C19orf67A6NJJ6 358 aa13.53□□□□□ -0.24
TMX3-213ENST00000578816 PROM2Q8N271 834 aa13.51□□□□□ -0.25
TMX3-213ENST00000578816 PRR29P0C7W0 189 aa13.5□□□□□ -0.25
TMX3-213ENST00000578816 CHADLQ6NUI6 762 aa13.48□□□□□ -0.25
TMX3-213ENST00000578816 PABPN1Q86U42 306 aaKnown RBP eCLIP13.47□□□□□ -0.25
TMX3-213ENST00000578816 GABBR2O75899 941 aa13.45□□□□□ -0.26
TMX3-213ENST00000578816 VASPP50552 380 aaPredicted RBP13.43□□□□□ -0.26
TMX3-213ENST00000578816 LHX8Q68G74 356 aa13.33□□□□□ -0.28
TMX3-213ENST00000578816 IFNLR1Q8IU57 520 aaPredicted RBP13.3□□□□□ -0.28
TMX3-213ENST00000578816 CD44P16070 742 aaKnown RBP13.28□□□□□ -0.28
TMX3-213ENST00000578816 FARP1Q9Y4F1 1045 aaPredicted RBP13.25□□□□□ -0.29
TMX3-213ENST00000578816 CLCN6P51797 869 aa13.17□□□□□ -0.3
TMX3-213ENST00000578816 DCAF8L2P0C7V8 631 aa13.12□□□□□ -0.31
TMX3-213ENST00000578816 DCBLD2Q96PD2 775 aa13.12□□□□□ -0.31
TMX3-213ENST00000578816 POTEIP0CG38 1075 aa13.1□□□□□ -0.31
TMX3-213ENST00000578816 PKD2Q13563 968 aa13.09□□□□□ -0.31
TMX3-213ENST00000578816 ZRANB1Q9UGI0 708 aa13.06□□□□□ -0.32
TMX3-213ENST00000578816 KLHL34Q8N239 644 aa13.05□□□□□ -0.32
TMX3-213ENST00000578816 STAG3Q9UJ98 1225 aa13.05□□□□□ -0.32
TMX3-213ENST00000578816 PLCB2Q00722 1185 aa13.04□□□□□ -0.32
TMX3-213ENST00000578816 ZNF579Q8NAF0 562 aaKnown RBP13□□□□□ -0.33
TMX3-213ENST00000578816 SPOCK2Q92563 424 aa13□□□□□ -0.33
TMX3-213ENST00000578816 CREBZFQ9NS37 354 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms