RNA–Protein interactions for RNA: ENST00000578204.1

DHX40-206, Transcript of DEAH-box helicase 40, humanhuman

TSL 3

Gene DHX40, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-206ENST00000578204 AEBP2Q6ZN18 517 aaPredicted RBP30.3■■■□□ 2.44
DHX40-206ENST00000578204 CHIC1Q5VXU3 224 aa29.11■■■□□ 2.25
DHX40-206ENST00000578204 SENP3Q9H4L4 574 aaPredicted RBP25.98■■□□□ 1.75
DHX40-206ENST00000578204 PHF23Q9BUL5 403 aaPredicted RBP25.6■■□□□ 1.69
DHX40-206ENST00000578204 FOXD1Q16676 465 aa24.08■■□□□ 1.45
DHX40-206ENST00000578204 PLPPR3Q6T4P5 718 aa23.45■■□□□ 1.34
DHX40-206ENST00000578204 PIAS4Q8N2W9 510 aaPredicted RBP22.64■■□□□ 1.21
DHX40-206ENST00000578204 ADRA2BP18089 450 aa22.63■■□□□ 1.21
DHX40-206ENST00000578204 PPP6R1Q9UPN7 881 aa22.63■■□□□ 1.21
DHX40-206ENST00000578204 MSH5O43196 834 aa22.57■■□□□ 1.2
DHX40-206ENST00000578204 POTEDQ86YR6 584 aa21.49■■□□□ 1.03
DHX40-206ENST00000578204 SCAF1Q9H7N4 1312 aaKnown RBP20.89■□□□□ 0.93
DHX40-206ENST00000578204 MAPK8IP2Q13387 824 aaPredicted RBP20.68■□□□□ 0.9
DHX40-206ENST00000578204 DMRT2Q9Y5R5 561 aa20.59■□□□□ 0.89
DHX40-206ENST00000578204 PPP4R3CPQ6ZMV5 832 aa20.54■□□□□ 0.88
DHX40-206ENST00000578204 CNKSR2Q8WXI2 1034 aa20.13■□□□□ 0.81
DHX40-206ENST00000578204 NCBP3Q53F19 620 aaKnown RBP19.94■□□□□ 0.78
DHX40-206ENST00000578204 HOXD11P31277 338 aaPredicted RBP19.91■□□□□ 0.78
DHX40-206ENST00000578204 RNF216Q9NWF9 866 aaPredicted RBP19.88■□□□□ 0.77
DHX40-206ENST00000578204 DCAF8L1A6NGE4 600 aa19.81■□□□□ 0.76
DHX40-206ENST00000578204 NPM3O75607 178 aaKnown RBP19.51■□□□□ 0.71
DHX40-206ENST00000578204 KCNA4P22459 653 aa19.34■□□□□ 0.69
DHX40-206ENST00000578204 DNAJC5BQ9UF47 199 aa19.23■□□□□ 0.67
DHX40-206ENST00000578204 CACNB1Q02641 598 aaPredicted RBP19.2■□□□□ 0.66
DHX40-206ENST00000578204 RNF39Q9H2S5 420 aa19.19■□□□□ 0.66
DHX40-206ENST00000578204 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.06■□□□□ 0.64
DHX40-206ENST00000578204 C1QBPQ07021 282 aaKnown RBP18.99■□□□□ 0.63
DHX40-206ENST00000578204 U3KPZ7 1027 aaPredicted RBP18.6■□□□□ 0.57
DHX40-206ENST00000578204 SLC4A2P04920 1241 aa18.51■□□□□ 0.55
DHX40-206ENST00000578204 SLC4A1APQ9BWU0 796 aaKnown RBP18.39■□□□□ 0.53
DHX40-206ENST00000578204 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.32■□□□□ 0.52
DHX40-206ENST00000578204 APLP2Q06481 763 aa18.32■□□□□ 0.52
DHX40-206ENST00000578204 HNRNPUL2Q1KMD3 747 aaKnown RBP18.32■□□□□ 0.52
DHX40-206ENST00000578204 CAPN15O75808 1086 aa18.3■□□□□ 0.52
DHX40-206ENST00000578204 SPINK5Q9NQ38 1064 aaPredicted RBP18.23■□□□□ 0.51
DHX40-206ENST00000578204 SAMD1Q6SPF0 538 aaPredicted RBP18.19■□□□□ 0.5
DHX40-206ENST00000578204 MYCNP04198 464 aaPredicted RBP18.13■□□□□ 0.49
DHX40-206ENST00000578204 ZNF219Q9P2Y4 722 aaPredicted RBP18.07■□□□□ 0.48
DHX40-206ENST00000578204 DSG3P32926 999 aa18.05■□□□□ 0.48
DHX40-206ENST00000578204 FOXD4L1Q9NU39 408 aa18.05■□□□□ 0.48
DHX40-206ENST00000578204 TRHP20396 242 aaPredicted RBP18.04■□□□□ 0.48
DHX40-206ENST00000578204 ABCB7O75027 752 aa17.84■□□□□ 0.45
DHX40-206ENST00000578204 ZBTB22O15209 634 aa17.72■□□□□ 0.43
DHX40-206ENST00000578204 POLA2Q14181 598 aa17.58■□□□□ 0.4
DHX40-206ENST00000578204 ATF5Q9Y2D1 282 aaPredicted RBP17.53■□□□□ 0.4
DHX40-206ENST00000578204 ATXN8OSP0DMR3 200 aa17.49■□□□□ 0.39
DHX40-206ENST00000578204 ZBTB12Q9Y330 459 aaPredicted RBP17.38■□□□□ 0.37
DHX40-206ENST00000578204 RBM42Q9BTD8 480 aaKnown RBP17.36■□□□□ 0.37
DHX40-206ENST00000578204 CSRNP3Q8WYN3 585 aa17.16■□□□□ 0.34
DHX40-206ENST00000578204 EHMT2Q96KQ7 1210 aa17.16■□□□□ 0.34
DHX40-206ENST00000578204 FBLN2P98095 1184 aa17.04■□□□□ 0.32
DHX40-206ENST00000578204 OSCARQ8IYS5 282 aa17.02■□□□□ 0.32
DHX40-206ENST00000578204 AKT1S1Q96B36 256 aa16.95■□□□□ 0.3
DHX40-206ENST00000578204 POTEHQ6S545 545 aa16.93■□□□□ 0.3
DHX40-206ENST00000578204 SPDYE2BA6NHP3 402 aa16.8■□□□□ 0.28
DHX40-206ENST00000578204 SPDYE6P0CI01 402 aa16.8■□□□□ 0.28
DHX40-206ENST00000578204 SPDYE2Q495Y8 402 aa16.8■□□□□ 0.28
DHX40-206ENST00000578204 CHRDL2Q6WN34 429 aa16.79■□□□□ 0.28
DHX40-206ENST00000578204 MKRN4PQ13434 485 aaPredicted RBP16.76■□□□□ 0.27
DHX40-206ENST00000578204 REM2Q8IYK8 340 aaPredicted RBP16.74■□□□□ 0.27
DHX40-206ENST00000578204 ZNF692Q9BU19 519 aaPredicted RBP16.62■□□□□ 0.25
DHX40-206ENST00000578204 PITPNM1O00562 1244 aa16.55■□□□□ 0.24
DHX40-206ENST00000578204 SSUH2Q9Y2M2 353 aa16.54■□□□□ 0.24
DHX40-206ENST00000578204 SPDYE1Q8NFV5 336 aaPredicted RBP16.46■□□□□ 0.23
DHX40-206ENST00000578204 PIP4P2Q8N4L2 257 aa16.41■□□□□ 0.22
DHX40-206ENST00000578204 CLEC11AQ9Y240 323 aa16.4■□□□□ 0.22
DHX40-206ENST00000578204 PABPN1Q86U42 306 aaKnown RBP eCLIP16.36■□□□□ 0.21
DHX40-206ENST00000578204 FXR2P51116 673 aaKnown RBP eCLIP16.35■□□□□ 0.21
DHX40-206ENST00000578204 SPDYE4A6NLX3 237 aa16.2■□□□□ 0.18
DHX40-206ENST00000578204 PRR29P0C7W0 189 aa16.17■□□□□ 0.18
DHX40-206ENST00000578204 PRKAR2AP13861 404 aaKnown RBP16.16■□□□□ 0.18
DHX40-206ENST00000578204 HAX1O00165 279 aa16.11■□□□□ 0.17
DHX40-206ENST00000578204 STAG3Q9UJ98 1225 aa16.06■□□□□ 0.16
DHX40-206ENST00000578204 SP7Q8TDD2 431 aaPredicted RBP16■□□□□ 0.15
DHX40-206ENST00000578204 CHADLQ6NUI6 762 aa15.98■□□□□ 0.15
DHX40-206ENST00000578204 C19orf67A6NJJ6 358 aa15.82■□□□□ 0.12
DHX40-206ENST00000578204 FARP1Q9Y4F1 1045 aaPredicted RBP15.81■□□□□ 0.12
DHX40-206ENST00000578204 PROM2Q8N271 834 aa15.77■□□□□ 0.12
DHX40-206ENST00000578204 EVX2Q03828 476 aa15.76■□□□□ 0.11
DHX40-206ENST00000578204 CREBZFQ9NS37 354 aa15.74■□□□□ 0.11
DHX40-206ENST00000578204 CD44P16070 742 aaKnown RBP15.68■□□□□ 0.1
DHX40-206ENST00000578204 FKBP8Q14318 412 aa15.64■□□□□ 0.09
DHX40-206ENST00000578204 NPM1P06748 294 aaKnown RBP eCLIP15.6■□□□□ 0.09
DHX40-206ENST00000578204 PLEKHG5O94827 1062 aa15.55■□□□□ 0.08
DHX40-206ENST00000578204 GABBR2O75899 941 aa15.53■□□□□ 0.08
DHX40-206ENST00000578204 PAK3O75914 559 aaPredicted RBP15.53■□□□□ 0.08
DHX40-206ENST00000578204 CLCN6P51797 869 aa15.5■□□□□ 0.07
DHX40-206ENST00000578204 ZRANB1Q9UGI0 708 aa15.5■□□□□ 0.07
DHX40-206ENST00000578204 MNX1P50219 401 aaPredicted RBP15.46■□□□□ 0.07
DHX40-206ENST00000578204 MIER1Q8N108 512 aa15.45■□□□□ 0.06
DHX40-206ENST00000578204 ZNF579Q8NAF0 562 aaKnown RBP15.43■□□□□ 0.06
DHX40-206ENST00000578204 PLCD3Q8N3E9 789 aa15.4■□□□□ 0.06
DHX40-206ENST00000578204 FBXO3Q9UK99 471 aa15.34■□□□□ 0.05
DHX40-206ENST00000578204 ZBTB47Q9UFB7 747 aaPredicted RBP15.33■□□□□ 0.04
DHX40-206ENST00000578204 DCBLD2Q96PD2 775 aa15.26■□□□□ 0.03
DHX40-206ENST00000578204 PHF12Q96QT6 1004 aa15.26■□□□□ 0.03
DHX40-206ENST00000578204 TSPYL2Q9H2G4 693 aaPredicted RBP15.24■□□□□ 0.03
DHX40-206ENST00000578204 GALR2O43603 387 aaPredicted RBP15.18■□□□□ 0.02
DHX40-206ENST00000578204 POTEIP0CG38 1075 aa15.12■□□□□ 0.01
DHX40-206ENST00000578204 RASEFQ8IZ41 740 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms