RNA–Protein interactions for RNA: ENST00000577837.1

BPTF-210, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 3

Gene BPTF, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-210ENST00000577837 AEBP2Q6ZN18 517 aaPredicted RBP23.4■■□□□ 1.34
BPTF-210ENST00000577837 CHIC1Q5VXU3 224 aa22.2■■□□□ 1.14
BPTF-210ENST00000577837 SENP3Q9H4L4 574 aaPredicted RBP20.04■□□□□ 0.8
BPTF-210ENST00000577837 PHF23Q9BUL5 403 aaPredicted RBP19.74■□□□□ 0.75
BPTF-210ENST00000577837 FOXD1Q16676 465 aa18.64■□□□□ 0.57
BPTF-210ENST00000577837 PLPPR3Q6T4P5 718 aa17.73■□□□□ 0.43
BPTF-210ENST00000577837 MSH5O43196 834 aa17.53■□□□□ 0.4
BPTF-210ENST00000577837 PIAS4Q8N2W9 510 aaPredicted RBP17.42■□□□□ 0.38
BPTF-210ENST00000577837 PPP6R1Q9UPN7 881 aa17.34■□□□□ 0.37
BPTF-210ENST00000577837 ADRA2BP18089 450 aa17.29■□□□□ 0.36
BPTF-210ENST00000577837 POTEDQ86YR6 584 aa17.18■□□□□ 0.34
BPTF-210ENST00000577837 SCAF1Q9H7N4 1312 aaKnown RBP15.92■□□□□ 0.14
BPTF-210ENST00000577837 MAPK8IP2Q13387 824 aaPredicted RBP15.89■□□□□ 0.13
BPTF-210ENST00000577837 DMRT2Q9Y5R5 561 aa15.87■□□□□ 0.13
BPTF-210ENST00000577837 PPP4R3CPQ6ZMV5 832 aa15.51■□□□□ 0.07
BPTF-210ENST00000577837 HOXD11P31277 338 aaPredicted RBP15.27■□□□□ 0.04
BPTF-210ENST00000577837 CNKSR2Q8WXI2 1034 aa15.26■□□□□ 0.03
BPTF-210ENST00000577837 DCAF8L1A6NGE4 600 aa15.2■□□□□ 0.02
BPTF-210ENST00000577837 RNF216Q9NWF9 866 aaPredicted RBP15.14■□□□□ 0.01
BPTF-210ENST00000577837 CACNB1Q02641 598 aaPredicted RBP15.06■□□□□ 0
BPTF-210ENST00000577837 NCBP3Q53F19 620 aaKnown RBP14.94□□□□□ -0.02
BPTF-210ENST00000577837 RNF39Q9H2S5 420 aa14.92□□□□□ -0.02
BPTF-210ENST00000577837 DNAJC5BQ9UF47 199 aa14.8□□□□□ -0.04
BPTF-210ENST00000577837 C1QBPQ07021 282 aaKnown RBP14.73□□□□□ -0.05
BPTF-210ENST00000577837 NPM3O75607 178 aaKnown RBP14.66□□□□□ -0.06
BPTF-210ENST00000577837 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.54□□□□□ -0.084e-8■■■□□ 18.5
BPTF-210ENST00000577837 KCNA4P22459 653 aa14.31□□□□□ -0.12
BPTF-210ENST00000577837 U3KPZ7 1027 aaPredicted RBP14.21□□□□□ -0.13
BPTF-210ENST00000577837 CAPN15O75808 1086 aa14.01□□□□□ -0.17
BPTF-210ENST00000577837 SLC4A2P04920 1241 aa14.01□□□□□ -0.17
BPTF-210ENST00000577837 SPINK5Q9NQ38 1064 aaPredicted RBP14□□□□□ -0.17
BPTF-210ENST00000577837 DSG3P32926 999 aa13.94□□□□□ -0.18
BPTF-210ENST00000577837 APLP2Q06481 763 aa13.9□□□□□ -0.18
BPTF-210ENST00000577837 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.85□□□□□ -0.19
BPTF-210ENST00000577837 HNRNPUL2Q1KMD3 747 aaKnown RBP13.85□□□□□ -0.19
BPTF-210ENST00000577837 ZNF219Q9P2Y4 722 aaPredicted RBP13.78□□□□□ -0.2
BPTF-210ENST00000577837 TRHP20396 242 aaPredicted RBP13.76□□□□□ -0.21
BPTF-210ENST00000577837 SAMD1Q6SPF0 538 aaPredicted RBP13.74□□□□□ -0.21
BPTF-210ENST00000577837 ABCB7O75027 752 aa13.66□□□□□ -0.22
BPTF-210ENST00000577837 MYCNP04198 464 aaPredicted RBP13.61□□□□□ -0.23
BPTF-210ENST00000577837 SLC4A1APQ9BWU0 796 aaKnown RBP13.52□□□□□ -0.25
BPTF-210ENST00000577837 POTEHQ6S545 545 aa13.46□□□□□ -0.25
BPTF-210ENST00000577837 FOXD4L1Q9NU39 408 aa13.42□□□□□ -0.26
BPTF-210ENST00000577837 POLA2Q14181 598 aa13.38□□□□□ -0.27
BPTF-210ENST00000577837 RBM42Q9BTD8 480 aaKnown RBP13.37□□□□□ -0.27
BPTF-210ENST00000577837 ATF5Q9Y2D1 282 aaPredicted RBP13.22□□□□□ -0.29
BPTF-210ENST00000577837 ZBTB12Q9Y330 459 aaPredicted RBP13.17□□□□□ -0.3
BPTF-210ENST00000577837 ZBTB22O15209 634 aa13.12□□□□□ -0.31
BPTF-210ENST00000577837 CHRDL2Q6WN34 429 aa13.05□□□□□ -0.32
BPTF-210ENST00000577837 ATXN8OSP0DMR3 200 aa13.04□□□□□ -0.32
BPTF-210ENST00000577837 AKT1S1Q96B36 256 aa13.02□□□□□ -0.33
BPTF-210ENST00000577837 OSCARQ8IYS5 282 aa12.94□□□□□ -0.34
BPTF-210ENST00000577837 REM2Q8IYK8 340 aaPredicted RBP12.86□□□□□ -0.35
BPTF-210ENST00000577837 FBLN2P98095 1184 aa12.8□□□□□ -0.36
BPTF-210ENST00000577837 SPDYE2BA6NHP3 402 aa12.73□□□□□ -0.37
BPTF-210ENST00000577837 SPDYE6P0CI01 402 aa12.73□□□□□ -0.37
BPTF-210ENST00000577837 SPDYE2Q495Y8 402 aa12.73□□□□□ -0.37
BPTF-210ENST00000577837 PITPNM1O00562 1244 aa12.72□□□□□ -0.37
BPTF-210ENST00000577837 PIP4P2Q8N4L2 257 aa12.72□□□□□ -0.37
BPTF-210ENST00000577837 FXR2P51116 673 aaKnown RBP eCLIP12.64□□□□□ -0.391e-6■■□□□ 14
BPTF-210ENST00000577837 MKRN4PQ13434 485 aaPredicted RBP12.62□□□□□ -0.39
BPTF-210ENST00000577837 SP7Q8TDD2 431 aaPredicted RBP12.6□□□□□ -0.39
BPTF-210ENST00000577837 ZNF692Q9BU19 519 aaPredicted RBP12.55□□□□□ -0.4
BPTF-210ENST00000577837 SSUH2Q9Y2M2 353 aa12.54□□□□□ -0.4
BPTF-210ENST00000577837 SPDYE1Q8NFV5 336 aaPredicted RBP12.53□□□□□ -0.4
BPTF-210ENST00000577837 HAX1O00165 279 aa12.51□□□□□ -0.41
BPTF-210ENST00000577837 CSRNP3Q8WYN3 585 aa12.48□□□□□ -0.41
BPTF-210ENST00000577837 CLEC11AQ9Y240 323 aa12.48□□□□□ -0.41
BPTF-210ENST00000577837 PRKAR2AP13861 404 aaKnown RBP12.4□□□□□ -0.42
BPTF-210ENST00000577837 PABPN1Q86U42 306 aaKnown RBP eCLIP12.35□□□□□ -0.43
BPTF-210ENST00000577837 EVX2Q03828 476 aa12.3□□□□□ -0.44
BPTF-210ENST00000577837 PRR29P0C7W0 189 aa12.28□□□□□ -0.44
BPTF-210ENST00000577837 EHMT2Q96KQ7 1210 aa12.26□□□□□ -0.45
BPTF-210ENST00000577837 C19orf67A6NJJ6 358 aa12.24□□□□□ -0.45
BPTF-210ENST00000577837 CHADLQ6NUI6 762 aa12.22□□□□□ -0.45
BPTF-210ENST00000577837 GABBR2O75899 941 aa12.07□□□□□ -0.48
BPTF-210ENST00000577837 FARP1Q9Y4F1 1045 aaPredicted RBP12.07□□□□□ -0.48
BPTF-210ENST00000577837 STAG3Q9UJ98 1225 aa12.06□□□□□ -0.48
BPTF-210ENST00000577837 SPDYE4A6NLX3 237 aa12.03□□□□□ -0.48
BPTF-210ENST00000577837 CD44P16070 742 aaKnown RBP12.01□□□□□ -0.49
BPTF-210ENST00000577837 CLCN6P51797 869 aa11.94□□□□□ -0.5
BPTF-210ENST00000577837 CREBZFQ9NS37 354 aa11.93□□□□□ -0.5
BPTF-210ENST00000577837 ZNF579Q8NAF0 562 aaKnown RBP11.84□□□□□ -0.51
BPTF-210ENST00000577837 ZRANB1Q9UGI0 708 aa11.83□□□□□ -0.52
BPTF-210ENST00000577837 LHX8Q68G74 356 aa11.81□□□□□ -0.52
BPTF-210ENST00000577837 POTEIP0CG38 1075 aa11.78□□□□□ -0.52
BPTF-210ENST00000577837 PAK3O75914 559 aaPredicted RBP11.77□□□□□ -0.53
BPTF-210ENST00000577837 NPM1P06748 294 aaKnown RBP eCLIP11.77□□□□□ -0.53
BPTF-210ENST00000577837 DCBLD2Q96PD2 775 aa11.76□□□□□ -0.53
BPTF-210ENST00000577837 PROM2Q8N271 834 aa11.73□□□□□ -0.53
BPTF-210ENST00000577837 MNX1P50219 401 aaPredicted RBP11.71□□□□□ -0.53
BPTF-210ENST00000577837 GALR2O43603 387 aaPredicted RBP11.66□□□□□ -0.54
BPTF-210ENST00000577837 PHF12Q96QT6 1004 aa11.63□□□□□ -0.55
BPTF-210ENST00000577837 PLEKHG5O94827 1062 aa11.54□□□□□ -0.56
BPTF-210ENST00000577837 TSPYL2Q9H2G4 693 aaPredicted RBP11.5□□□□□ -0.57
BPTF-210ENST00000577837 MS4A3Q96HJ5 214 aa11.49□□□□□ -0.57
BPTF-210ENST00000577837 MIER1Q8N108 512 aa11.48□□□□□ -0.57
BPTF-210ENST00000577837 CCDC61Q9Y6R9 512 aa11.46□□□□□ -0.57
BPTF-210ENST00000577837 ASTLQ6HA08 431 aaPredicted RBP11.44□□□□□ -0.58
BPTF-210ENST00000577837 PELP1Q8IZL8 1130 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms