RNA–Protein interactions for RNA: ENST00000576382.1

LCMT1-211, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 3

Gene LCMT1, Length 260 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-211ENST00000576382 AEBP2Q6ZN18 517 aaPredicted RBP23.13■■□□□ 1.29
LCMT1-211ENST00000576382 CHIC1Q5VXU3 224 aa22.27■■□□□ 1.16
LCMT1-211ENST00000576382 SENP3Q9H4L4 574 aaPredicted RBP19.62■□□□□ 0.73
LCMT1-211ENST00000576382 PHF23Q9BUL5 403 aaPredicted RBP19.58■□□□□ 0.72
LCMT1-211ENST00000576382 FOXD1Q16676 465 aa18.28■□□□□ 0.52
LCMT1-211ENST00000576382 PLPPR3Q6T4P5 718 aa17.94■□□□□ 0.46
LCMT1-211ENST00000576382 PPP6R1Q9UPN7 881 aa17.39■□□□□ 0.37
LCMT1-211ENST00000576382 ADRA2BP18089 450 aa17.37■□□□□ 0.37
LCMT1-211ENST00000576382 PIAS4Q8N2W9 510 aaPredicted RBP17.18■□□□□ 0.34
LCMT1-211ENST00000576382 MSH5O43196 834 aa16.92■□□□□ 0.3
LCMT1-211ENST00000576382 POTEDQ86YR6 584 aa15.95■□□□□ 0.14
LCMT1-211ENST00000576382 MAPK8IP2Q13387 824 aaPredicted RBP15.86■□□□□ 0.13
LCMT1-211ENST00000576382 SCAF1Q9H7N4 1312 aaKnown RBP15.82■□□□□ 0.12
LCMT1-211ENST00000576382 PPP4R3CPQ6ZMV5 832 aa15.81■□□□□ 0.12
LCMT1-211ENST00000576382 DMRT2Q9Y5R5 561 aa15.62■□□□□ 0.09
LCMT1-211ENST00000576382 CNKSR2Q8WXI2 1034 aa15.4■□□□□ 0.06
LCMT1-211ENST00000576382 NCBP3Q53F19 620 aaKnown RBP15.28■□□□□ 0.04
LCMT1-211ENST00000576382 HOXD11P31277 338 aaPredicted RBP15.18■□□□□ 0.02
LCMT1-211ENST00000576382 RNF216Q9NWF9 866 aaPredicted RBP15.16■□□□□ 0.02
LCMT1-211ENST00000576382 KCNA4P22459 653 aa15.14■□□□□ 0.01
LCMT1-211ENST00000576382 NPM3O75607 178 aaKnown RBP15.09■□□□□ 0.01
LCMT1-211ENST00000576382 DCAF8L1A6NGE4 600 aa15.03■□□□□ -0
LCMT1-211ENST00000576382 DNAJC5BQ9UF47 199 aa14.59□□□□□ -0.07
LCMT1-211ENST00000576382 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.5□□□□□ -0.09
LCMT1-211ENST00000576382 RNF39Q9H2S5 420 aa14.49□□□□□ -0.09
LCMT1-211ENST00000576382 CACNB1Q02641 598 aaPredicted RBP14.36□□□□□ -0.11
LCMT1-211ENST00000576382 SLC4A1APQ9BWU0 796 aaKnown RBP14.36□□□□□ -0.11
LCMT1-211ENST00000576382 SLC4A2P04920 1241 aa14.32□□□□□ -0.12
LCMT1-211ENST00000576382 C1QBPQ07021 282 aaKnown RBP14.28□□□□□ -0.12
LCMT1-211ENST00000576382 U3KPZ7 1027 aaPredicted RBP14.24□□□□□ -0.13
LCMT1-211ENST00000576382 FOXD4L1Q9NU39 408 aa13.98□□□□□ -0.17
LCMT1-211ENST00000576382 SPINK5Q9NQ38 1064 aaPredicted RBP13.95□□□□□ -0.18
LCMT1-211ENST00000576382 ZBTB22O15209 634 aa13.93□□□□□ -0.18
LCMT1-211ENST00000576382 MYCNP04198 464 aaPredicted RBP13.93□□□□□ -0.18
LCMT1-211ENST00000576382 CAPN15O75808 1086 aa13.9□□□□□ -0.18
LCMT1-211ENST00000576382 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.89□□□□□ -0.19
LCMT1-211ENST00000576382 HNRNPUL2Q1KMD3 747 aaKnown RBP13.89□□□□□ -0.19
LCMT1-211ENST00000576382 SAMD1Q6SPF0 538 aaPredicted RBP13.85□□□□□ -0.19
LCMT1-211ENST00000576382 APLP2Q06481 763 aa13.82□□□□□ -0.2
LCMT1-211ENST00000576382 TRHP20396 242 aaPredicted RBP13.78□□□□□ -0.2
LCMT1-211ENST00000576382 DSG3P32926 999 aa13.7□□□□□ -0.22
LCMT1-211ENST00000576382 ZNF219Q9P2Y4 722 aaPredicted RBP13.7□□□□□ -0.22
LCMT1-211ENST00000576382 EHMT2Q96KQ7 1210 aa13.67□□□□□ -0.22
LCMT1-211ENST00000576382 ABCB7O75027 752 aa13.64□□□□□ -0.23
LCMT1-211ENST00000576382 ATF5Q9Y2D1 282 aaPredicted RBP13.63□□□□□ -0.23
LCMT1-211ENST00000576382 CSRNP3Q8WYN3 585 aa13.61□□□□□ -0.23
LCMT1-211ENST00000576382 ATXN8OSP0DMR3 200 aa13.47□□□□□ -0.25
LCMT1-211ENST00000576382 POLA2Q14181 598 aa13.46□□□□□ -0.25
LCMT1-211ENST00000576382 ZBTB12Q9Y330 459 aaPredicted RBP13.16□□□□□ -0.3
LCMT1-211ENST00000576382 RBM42Q9BTD8 480 aaKnown RBP13.04□□□□□ -0.32
LCMT1-211ENST00000576382 FBLN2P98095 1184 aa13.03□□□□□ -0.32
LCMT1-211ENST00000576382 OSCARQ8IYS5 282 aa13.03□□□□□ -0.32
LCMT1-211ENST00000576382 MKRN4PQ13434 485 aaPredicted RBP13.01□□□□□ -0.33
LCMT1-211ENST00000576382 AKT1S1Q96B36 256 aa12.82□□□□□ -0.36
LCMT1-211ENST00000576382 SPDYE2BA6NHP3 402 aa12.8□□□□□ -0.36
LCMT1-211ENST00000576382 SPDYE6P0CI01 402 aa12.8□□□□□ -0.36
LCMT1-211ENST00000576382 SPDYE2Q495Y8 402 aa12.8□□□□□ -0.36
LCMT1-211ENST00000576382 ZNF692Q9BU19 519 aaPredicted RBP12.74□□□□□ -0.37
LCMT1-211ENST00000576382 REM2Q8IYK8 340 aaPredicted RBP12.73□□□□□ -0.37
LCMT1-211ENST00000576382 SSUH2Q9Y2M2 353 aa12.68□□□□□ -0.38
LCMT1-211ENST00000576382 CHRDL2Q6WN34 429 aa12.64□□□□□ -0.39
LCMT1-211ENST00000576382 PITPNM1O00562 1244 aa12.6□□□□□ -0.39
LCMT1-211ENST00000576382 PABPN1Q86U42 306 aaKnown RBP eCLIP12.58□□□□□ -0.4
LCMT1-211ENST00000576382 POTEHQ6S545 545 aa12.57□□□□□ -0.4
LCMT1-211ENST00000576382 SPDYE4A6NLX3 237 aa12.56□□□□□ -0.4
LCMT1-211ENST00000576382 CLEC11AQ9Y240 323 aa12.52□□□□□ -0.41
LCMT1-211ENST00000576382 SPDYE1Q8NFV5 336 aaPredicted RBP12.51□□□□□ -0.41
LCMT1-211ENST00000576382 PIP4P2Q8N4L2 257 aa12.43□□□□□ -0.42
LCMT1-211ENST00000576382 FXR2P51116 673 aaKnown RBP eCLIP12.38□□□□□ -0.43
LCMT1-211ENST00000576382 PRR29P0C7W0 189 aa12.33□□□□□ -0.44
LCMT1-211ENST00000576382 FKBP8Q14318 412 aa12.33□□□□□ -0.44
LCMT1-211ENST00000576382 PRKAR2AP13861 404 aaKnown RBP12.28□□□□□ -0.44
LCMT1-211ENST00000576382 PROM2Q8N271 834 aa12.27□□□□□ -0.45
LCMT1-211ENST00000576382 CHADLQ6NUI6 762 aa12.25□□□□□ -0.45
LCMT1-211ENST00000576382 STAG3Q9UJ98 1225 aa12.25□□□□□ -0.45
LCMT1-211ENST00000576382 HAX1O00165 279 aa12.12□□□□□ -0.47
LCMT1-211ENST00000576382 CREBZFQ9NS37 354 aa12.11□□□□□ -0.47
LCMT1-211ENST00000576382 FARP1Q9Y4F1 1045 aaPredicted RBP12.07□□□□□ -0.48
LCMT1-211ENST00000576382 EVX2Q03828 476 aa12.02□□□□□ -0.49
LCMT1-211ENST00000576382 C19orf67A6NJJ6 358 aa11.98□□□□□ -0.49
LCMT1-211ENST00000576382 MIER1Q8N108 512 aa11.96□□□□□ -0.49
LCMT1-211ENST00000576382 SP7Q8TDD2 431 aaPredicted RBP11.94□□□□□ -0.5
LCMT1-211ENST00000576382 MNX1P50219 401 aaPredicted RBP11.93□□□□□ -0.5
LCMT1-211ENST00000576382 CD44P16070 742 aaKnown RBP11.91□□□□□ -0.5
LCMT1-211ENST00000576382 PLCD3Q8N3E9 789 aa11.91□□□□□ -0.5
LCMT1-211ENST00000576382 FBXO3Q9UK99 471 aa11.9□□□□□ -0.5
LCMT1-211ENST00000576382 PLEKHG5O94827 1062 aa11.87□□□□□ -0.51
LCMT1-211ENST00000576382 NPM1P06748 294 aaKnown RBP eCLIP11.87□□□□□ -0.51
LCMT1-211ENST00000576382 ZRANB1Q9UGI0 708 aa11.81□□□□□ -0.52
LCMT1-211ENST00000576382 VASPP50552 380 aaPredicted RBP11.79□□□□□ -0.52
LCMT1-211ENST00000576382 PAK3O75914 559 aaPredicted RBP11.76□□□□□ -0.53
LCMT1-211ENST00000576382 GABBR2O75899 941 aa11.74□□□□□ -0.53
LCMT1-211ENST00000576382 TSPYL2Q9H2G4 693 aaPredicted RBP11.73□□□□□ -0.53
LCMT1-211ENST00000576382 ZBTB47Q9UFB7 747 aaPredicted RBP11.73□□□□□ -0.53
LCMT1-211ENST00000576382 RASEFQ8IZ41 740 aa11.71□□□□□ -0.53
LCMT1-211ENST00000576382 ZNF579Q8NAF0 562 aaKnown RBP11.71□□□□□ -0.53
LCMT1-211ENST00000576382 PHF12Q96QT6 1004 aa11.7□□□□□ -0.54
LCMT1-211ENST00000576382 KLHL34Q8N239 644 aa11.68□□□□□ -0.54
LCMT1-211ENST00000576382 NUBP1P53384 320 aa11.67□□□□□ -0.54
LCMT1-211ENST00000576382 IFNLR1Q8IU57 520 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms