RNA–Protein interactions for RNA: ENST00000574567.1

NDC80-203, Transcript of NDC80, kinetochore complex component, humanhuman

TSL 5

Gene NDC80, Length 289 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC80-203ENST00000574567 AEBP2Q6ZN18 517 aaPredicted RBP27.73■■■□□ 2.03
NDC80-203ENST00000574567 CHIC1Q5VXU3 224 aa26.31■■□□□ 1.8
NDC80-203ENST00000574567 SENP3Q9H4L4 574 aaPredicted RBP23.76■■□□□ 1.39
NDC80-203ENST00000574567 PHF23Q9BUL5 403 aaPredicted RBP23.38■■□□□ 1.33
NDC80-203ENST00000574567 FOXD1Q16676 465 aa22.08■■□□□ 1.13
NDC80-203ENST00000574567 PLPPR3Q6T4P5 718 aa21■□□□□ 0.95
NDC80-203ENST00000574567 MSH5O43196 834 aa20.78■□□□□ 0.92
NDC80-203ENST00000574567 PIAS4Q8N2W9 510 aaPredicted RBP20.63■□□□□ 0.89
NDC80-203ENST00000574567 PPP6R1Q9UPN7 881 aa20.55■□□□□ 0.88
NDC80-203ENST00000574567 ADRA2BP18089 450 aa20.47■□□□□ 0.87
NDC80-203ENST00000574567 POTEDQ86YR6 584 aa20.36■□□□□ 0.85
NDC80-203ENST00000574567 SCAF1Q9H7N4 1312 aaKnown RBP18.84■□□□□ 0.61
NDC80-203ENST00000574567 MAPK8IP2Q13387 824 aaPredicted RBP18.81■□□□□ 0.6
NDC80-203ENST00000574567 DMRT2Q9Y5R5 561 aa18.81■□□□□ 0.6
NDC80-203ENST00000574567 PPP4R3CPQ6ZMV5 832 aa18.36■□□□□ 0.53
NDC80-203ENST00000574567 HOXD11P31277 338 aaPredicted RBP18.1■□□□□ 0.49
NDC80-203ENST00000574567 CNKSR2Q8WXI2 1034 aa18.07■□□□□ 0.48
NDC80-203ENST00000574567 DCAF8L1A6NGE4 600 aa17.95■□□□□ 0.46
NDC80-203ENST00000574567 RNF216Q9NWF9 866 aaPredicted RBP17.94■□□□□ 0.46
NDC80-203ENST00000574567 CACNB1Q02641 598 aaPredicted RBP17.82■□□□□ 0.44
NDC80-203ENST00000574567 RNF39Q9H2S5 420 aa17.7■□□□□ 0.42
NDC80-203ENST00000574567 NCBP3Q53F19 620 aaKnown RBP17.68■□□□□ 0.42
NDC80-203ENST00000574567 DNAJC5BQ9UF47 199 aa17.59■□□□□ 0.41
NDC80-203ENST00000574567 C1QBPQ07021 282 aaKnown RBP17.47■□□□□ 0.39
NDC80-203ENST00000574567 NPM3O75607 178 aaKnown RBP17.37■□□□□ 0.37
NDC80-203ENST00000574567 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.19■□□□□ 0.34
NDC80-203ENST00000574567 KCNA4P22459 653 aa17.05■□□□□ 0.32
NDC80-203ENST00000574567 U3KPZ7 1027 aaPredicted RBP16.82■□□□□ 0.28
NDC80-203ENST00000574567 SLC4A2P04920 1241 aa16.6■□□□□ 0.25
NDC80-203ENST00000574567 SPINK5Q9NQ38 1064 aaPredicted RBP16.57■□□□□ 0.24
NDC80-203ENST00000574567 CAPN15O75808 1086 aa16.56■□□□□ 0.24
NDC80-203ENST00000574567 DSG3P32926 999 aa16.52■□□□□ 0.24
NDC80-203ENST00000574567 APLP2Q06481 763 aa16.45■□□□□ 0.22
NDC80-203ENST00000574567 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.4■□□□□ 0.22
NDC80-203ENST00000574567 HNRNPUL2Q1KMD3 747 aaKnown RBP16.4■□□□□ 0.22
NDC80-203ENST00000574567 ZNF219Q9P2Y4 722 aaPredicted RBP16.32■□□□□ 0.2
NDC80-203ENST00000574567 SAMD1Q6SPF0 538 aaPredicted RBP16.29■□□□□ 0.2
NDC80-203ENST00000574567 TRHP20396 242 aaPredicted RBP16.26■□□□□ 0.19
NDC80-203ENST00000574567 ABCB7O75027 752 aa16.14■□□□□ 0.17
NDC80-203ENST00000574567 MYCNP04198 464 aaPredicted RBP16.12■□□□□ 0.17
NDC80-203ENST00000574567 SLC4A1APQ9BWU0 796 aaKnown RBP16.1■□□□□ 0.17
NDC80-203ENST00000574567 POTEHQ6S545 545 aa15.95■□□□□ 0.14
NDC80-203ENST00000574567 FOXD4L1Q9NU39 408 aa15.88■□□□□ 0.13
NDC80-203ENST00000574567 RBM42Q9BTD8 480 aaKnown RBP15.83■□□□□ 0.12
NDC80-203ENST00000574567 POLA2Q14181 598 aa15.82■□□□□ 0.12
NDC80-203ENST00000574567 ZBTB22O15209 634 aa15.78■□□□□ 0.12
NDC80-203ENST00000574567 ATF5Q9Y2D1 282 aaPredicted RBP15.66■□□□□ 0.1
NDC80-203ENST00000574567 ZBTB12Q9Y330 459 aaPredicted RBP15.6■□□□□ 0.09
NDC80-203ENST00000574567 ATXN8OSP0DMR3 200 aa15.46■□□□□ 0.07
NDC80-203ENST00000574567 CHRDL2Q6WN34 429 aa15.46■□□□□ 0.07
NDC80-203ENST00000574567 CSRNP3Q8WYN3 585 aa15.46■□□□□ 0.07
NDC80-203ENST00000574567 EHMT2Q96KQ7 1210 aa15.44■□□□□ 0.06
NDC80-203ENST00000574567 AKT1S1Q96B36 256 aa15.43■□□□□ 0.06
NDC80-203ENST00000574567 OSCARQ8IYS5 282 aa15.32■□□□□ 0.04
NDC80-203ENST00000574567 REM2Q8IYK8 340 aaPredicted RBP15.23■□□□□ 0.03
NDC80-203ENST00000574567 FBLN2P98095 1184 aa15.13■□□□□ 0.01
NDC80-203ENST00000574567 SPDYE2BA6NHP3 402 aa15.09■□□□□ 0.01
NDC80-203ENST00000574567 SPDYE6P0CI01 402 aa15.09■□□□□ 0.01
NDC80-203ENST00000574567 SPDYE2Q495Y8 402 aa15.09■□□□□ 0.01
NDC80-203ENST00000574567 PITPNM1O00562 1244 aa15.07■□□□□ 0
NDC80-203ENST00000574567 PIP4P2Q8N4L2 257 aa15.06■□□□□ 0
NDC80-203ENST00000574567 FXR2P51116 673 aaKnown RBP eCLIP14.99□□□□□ -0.01
NDC80-203ENST00000574567 MKRN4PQ13434 485 aaPredicted RBP14.96□□□□□ -0.01
NDC80-203ENST00000574567 SP7Q8TDD2 431 aaPredicted RBP14.92□□□□□ -0.02
NDC80-203ENST00000574567 SSUH2Q9Y2M2 353 aa14.87□□□□□ -0.03
NDC80-203ENST00000574567 SPDYE1Q8NFV5 336 aaPredicted RBP14.83□□□□□ -0.04
NDC80-203ENST00000574567 ZNF692Q9BU19 519 aaPredicted RBP14.83□□□□□ -0.04
NDC80-203ENST00000574567 HAX1O00165 279 aa14.78□□□□□ -0.04
NDC80-203ENST00000574567 CLEC11AQ9Y240 323 aa14.73□□□□□ -0.05
NDC80-203ENST00000574567 PRKAR2AP13861 404 aaKnown RBP14.67□□□□□ -0.06
NDC80-203ENST00000574567 PABPN1Q86U42 306 aaKnown RBP eCLIP14.6□□□□□ -0.07
NDC80-203ENST00000574567 EVX2Q03828 476 aa14.56□□□□□ -0.08
NDC80-203ENST00000574567 C19orf67A6NJJ6 358 aa14.51□□□□□ -0.09
NDC80-203ENST00000574567 PRR29P0C7W0 189 aa14.51□□□□□ -0.09
NDC80-203ENST00000574567 CHADLQ6NUI6 762 aa14.44□□□□□ -0.1
NDC80-203ENST00000574567 GABBR2O75899 941 aa14.28□□□□□ -0.12
NDC80-203ENST00000574567 FARP1Q9Y4F1 1045 aaPredicted RBP14.28□□□□□ -0.12
NDC80-203ENST00000574567 STAG3Q9UJ98 1225 aa14.27□□□□□ -0.13
NDC80-203ENST00000574567 SPDYE4A6NLX3 237 aa14.23□□□□□ -0.13
NDC80-203ENST00000574567 CD44P16070 742 aaKnown RBP14.21□□□□□ -0.13
NDC80-203ENST00000574567 CLCN6P51797 869 aa14.16□□□□□ -0.14
NDC80-203ENST00000574567 CREBZFQ9NS37 354 aa14.13□□□□□ -0.15
NDC80-203ENST00000574567 ZNF579Q8NAF0 562 aaKnown RBP14.04□□□□□ -0.16
NDC80-203ENST00000574567 LHX8Q68G74 356 aa13.98□□□□□ -0.17
NDC80-203ENST00000574567 ZRANB1Q9UGI0 708 aa13.98□□□□□ -0.17
NDC80-203ENST00000574567 POTEIP0CG38 1075 aa13.96□□□□□ -0.17
NDC80-203ENST00000574567 PROM2Q8N271 834 aa13.94□□□□□ -0.18
NDC80-203ENST00000574567 NPM1P06748 294 aaKnown RBP eCLIP13.92□□□□□ -0.18
NDC80-203ENST00000574567 PAK3O75914 559 aaPredicted RBP13.9□□□□□ -0.18
NDC80-203ENST00000574567 MNX1P50219 401 aaPredicted RBP13.89□□□□□ -0.19
NDC80-203ENST00000574567 FKBP8Q14318 412 aa13.89□□□□□ -0.19
NDC80-203ENST00000574567 DCBLD2Q96PD2 775 aa13.89□□□□□ -0.19
NDC80-203ENST00000574567 GALR2O43603 387 aaPredicted RBP13.8□□□□□ -0.2
NDC80-203ENST00000574567 PHF12Q96QT6 1004 aa13.76□□□□□ -0.21
NDC80-203ENST00000574567 PLEKHG5O94827 1062 aa13.63□□□□□ -0.23
NDC80-203ENST00000574567 MS4A3Q96HJ5 214 aa13.59□□□□□ -0.23
NDC80-203ENST00000574567 TSPYL2Q9H2G4 693 aaPredicted RBP13.58□□□□□ -0.24
NDC80-203ENST00000574567 ASTLQ6HA08 431 aaPredicted RBP13.57□□□□□ -0.24
NDC80-203ENST00000574567 CCDC61Q9Y6R9 512 aa13.57□□□□□ -0.24
NDC80-203ENST00000574567 MIER1Q8N108 512 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms