RNA–Protein interactions for RNA: ENST00000573037.1

BCAR4-203, Transcript of breast cancer anti-estrogen resistance 4, humanhuman

TSL 3

Gene BCAR4, Length 887 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAR4-203ENST00000573037 AEBP2Q6ZN18 517 aaPredicted RBP19.76■□□□□ 0.75
BCAR4-203ENST00000573037 CHIC1Q5VXU3 224 aa18.77■□□□□ 0.6
BCAR4-203ENST00000573037 SENP3Q9H4L4 574 aaPredicted RBP16.99■□□□□ 0.31
BCAR4-203ENST00000573037 PHF23Q9BUL5 403 aaPredicted RBP16.65■□□□□ 0.26
BCAR4-203ENST00000573037 FOXD1Q16676 465 aa15.84■□□□□ 0.13
BCAR4-203ENST00000573037 POTEDQ86YR6 584 aa15.54■□□□□ 0.08
BCAR4-203ENST00000573037 PLPPR3Q6T4P5 718 aa15.44■□□□□ 0.06
BCAR4-203ENST00000573037 MSH5O43196 834 aa15.09■□□□□ 0.01
BCAR4-203ENST00000573037 PIAS4Q8N2W9 510 aaPredicted RBP14.74□□□□□ -0.05
BCAR4-203ENST00000573037 PPP6R1Q9UPN7 881 aa14.52□□□□□ -0.09
BCAR4-203ENST00000573037 ADRA2BP18089 450 aa14.46□□□□□ -0.09
BCAR4-203ENST00000573037 KCNA4P22459 653 aa13.9□□□□□ -0.18
BCAR4-203ENST00000573037 PPP4R3CPQ6ZMV5 832 aa13.65□□□□□ -0.22
BCAR4-203ENST00000573037 EHMT2Q96KQ7 1210 aa13.46□□□□□ -0.25
BCAR4-203ENST00000573037 NCBP3Q53F19 620 aaKnown RBP13.41□□□□□ -0.26
BCAR4-203ENST00000573037 MAPK8IP2Q13387 824 aaPredicted RBP13.39□□□□□ -0.27
BCAR4-203ENST00000573037 DMRT2Q9Y5R5 561 aa13.36□□□□□ -0.27
BCAR4-203ENST00000573037 SLC4A1APQ9BWU0 796 aaKnown RBP13.3□□□□□ -0.28
BCAR4-203ENST00000573037 CACNB1Q02641 598 aaPredicted RBP13.27□□□□□ -0.29
BCAR4-203ENST00000573037 NPM3O75607 178 aaKnown RBP13.26□□□□□ -0.29
BCAR4-203ENST00000573037 SCAF1Q9H7N4 1312 aaKnown RBP13.21□□□□□ -0.29
BCAR4-203ENST00000573037 CNKSR2Q8WXI2 1034 aa13.17□□□□□ -0.3
BCAR4-203ENST00000573037 CSRNP3Q8WYN3 585 aa13.11□□□□□ -0.31
BCAR4-203ENST00000573037 DCAF8L1A6NGE4 600 aa12.91□□□□□ -0.34
BCAR4-203ENST00000573037 DNAJC5BQ9UF47 199 aa12.88□□□□□ -0.35
BCAR4-203ENST00000573037 ZBTB22O15209 634 aa12.84□□□□□ -0.35
BCAR4-203ENST00000573037 RNF216Q9NWF9 866 aaPredicted RBP12.81□□□□□ -0.36
BCAR4-203ENST00000573037 RNF39Q9H2S5 420 aa12.78□□□□□ -0.36
BCAR4-203ENST00000573037 HOXD11P31277 338 aaPredicted RBP12.71□□□□□ -0.37
BCAR4-203ENST00000573037 FOXD4L1Q9NU39 408 aa12.65□□□□□ -0.38
BCAR4-203ENST00000573037 C1QBPQ07021 282 aaKnown RBP12.6□□□□□ -0.39
BCAR4-203ENST00000573037 SLC4A2P04920 1241 aa12.42□□□□□ -0.42
BCAR4-203ENST00000573037 MYCNP04198 464 aaPredicted RBP12.24□□□□□ -0.45
BCAR4-203ENST00000573037 ATXN8OSP0DMR3 200 aa12.17□□□□□ -0.46
BCAR4-203ENST00000573037 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.14□□□□□ -0.47
BCAR4-203ENST00000573037 POTEHQ6S545 545 aa12.1□□□□□ -0.47
BCAR4-203ENST00000573037 U3KPZ7 1027 aaPredicted RBP11.92□□□□□ -0.5
BCAR4-203ENST00000573037 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.88□□□□□ -0.51
BCAR4-203ENST00000573037 HNRNPUL2Q1KMD3 747 aaKnown RBP11.88□□□□□ -0.51
BCAR4-203ENST00000573037 ATF5Q9Y2D1 282 aaPredicted RBP11.88□□□□□ -0.51
BCAR4-203ENST00000573037 SAMD1Q6SPF0 538 aaPredicted RBP11.87□□□□□ -0.51
BCAR4-203ENST00000573037 CAPN15O75808 1086 aa11.8□□□□□ -0.52
BCAR4-203ENST00000573037 DSG3P32926 999 aa11.8□□□□□ -0.52
BCAR4-203ENST00000573037 FKBP8Q14318 412 aa11.8□□□□□ -0.52
BCAR4-203ENST00000573037 SPINK5Q9NQ38 1064 aaPredicted RBP11.78□□□□□ -0.52
BCAR4-203ENST00000573037 APLP2Q06481 763 aa11.64□□□□□ -0.55
BCAR4-203ENST00000573037 ZNF219Q9P2Y4 722 aaPredicted RBP11.62□□□□□ -0.55
BCAR4-203ENST00000573037 AMER1Q5JTC6 1135 aaPredicted RBP11.61□□□□□ -0.55
BCAR4-203ENST00000573037 RTN4Q9NQC3 1192 aaKnown RBP11.61□□□□□ -0.55
BCAR4-203ENST00000573037 TRHP20396 242 aaPredicted RBP11.52□□□□□ -0.57
BCAR4-203ENST00000573037 ABCB7O75027 752 aa11.5□□□□□ -0.57
BCAR4-203ENST00000573037 MKRN4PQ13434 485 aaPredicted RBP11.41□□□□□ -0.58
BCAR4-203ENST00000573037 RBM42Q9BTD8 480 aaKnown RBP11.35□□□□□ -0.59
BCAR4-203ENST00000573037 SPDYE4A6NLX3 237 aa11.34□□□□□ -0.59
BCAR4-203ENST00000573037 FBLN2P98095 1184 aa11.31□□□□□ -0.6
BCAR4-203ENST00000573037 POLA2Q14181 598 aa11.31□□□□□ -0.6
BCAR4-203ENST00000573037 PROM2Q8N271 834 aa11.3□□□□□ -0.6
BCAR4-203ENST00000573037 CHRDL2Q6WN34 429 aa11.26□□□□□ -0.61
BCAR4-203ENST00000573037 SLC24A1O60721 1099 aa11.25□□□□□ -0.61
BCAR4-203ENST00000573037 FBXO3Q9UK99 471 aa11.24□□□□□ -0.61
BCAR4-203ENST00000573037 ZBTB12Q9Y330 459 aaPredicted RBP11.18□□□□□ -0.62
BCAR4-203ENST00000573037 VASPP50552 380 aaPredicted RBP11.11□□□□□ -0.63
BCAR4-203ENST00000573037 SP7Q8TDD2 431 aaPredicted RBP11.11□□□□□ -0.63
BCAR4-203ENST00000573037 IFNLR1Q8IU57 520 aaPredicted RBP10.99□□□□□ -0.65
BCAR4-203ENST00000573037 OSCARQ8IYS5 282 aa10.94□□□□□ -0.66
BCAR4-203ENST00000573037 AKT1S1Q96B36 256 aa10.94□□□□□ -0.66
BCAR4-203ENST00000573037 SPDYE2BA6NHP3 402 aa10.92□□□□□ -0.66
BCAR4-203ENST00000573037 SPDYE6P0CI01 402 aa10.92□□□□□ -0.66
BCAR4-203ENST00000573037 SPDYE2Q495Y8 402 aa10.92□□□□□ -0.66
BCAR4-203ENST00000573037 SSUH2Q9Y2M2 353 aa10.92□□□□□ -0.66
BCAR4-203ENST00000573037 ZNF692Q9BU19 519 aaPredicted RBP10.91□□□□□ -0.66
BCAR4-203ENST00000573037 PIP4P2Q8N4L2 257 aa10.86□□□□□ -0.67
BCAR4-203ENST00000573037 HAX1O00165 279 aa10.85□□□□□ -0.67
BCAR4-203ENST00000573037 PKD2Q13563 968 aa10.82□□□□□ -0.68
BCAR4-203ENST00000573037 STAG3Q9UJ98 1225 aa10.82□□□□□ -0.68
BCAR4-203ENST00000573037 REM2Q8IYK8 340 aaPredicted RBP10.81□□□□□ -0.68
BCAR4-203ENST00000573037 PABPN1Q86U42 306 aaKnown RBP eCLIP10.8□□□□□ -0.68
BCAR4-203ENST00000573037 SPOCK2Q92563 424 aa10.76□□□□□ -0.69
BCAR4-203ENST00000573037 KLHL34Q8N239 644 aa10.73□□□□□ -0.69
BCAR4-203ENST00000573037 PLCB2Q00722 1185 aa10.72□□□□□ -0.69
BCAR4-203ENST00000573037 PITPNM1O00562 1244 aa10.71□□□□□ -0.69
BCAR4-203ENST00000573037 FXR2P51116 673 aaKnown RBP eCLIP10.7□□□□□ -0.7
BCAR4-203ENST00000573037 PLCD3Q8N3E9 789 aa10.7□□□□□ -0.7
BCAR4-203ENST00000573037 DCAF8L2P0C7V8 631 aa10.68□□□□□ -0.7
BCAR4-203ENST00000573037 MIER1Q8N108 512 aa10.65□□□□□ -0.7
BCAR4-203ENST00000573037 ECM2O94769 699 aaPredicted RBP10.62□□□□□ -0.71
BCAR4-203ENST00000573037 ZBTB47Q9UFB7 747 aaPredicted RBP10.58□□□□□ -0.72
BCAR4-203ENST00000573037 EVX2Q03828 476 aa10.57□□□□□ -0.72
BCAR4-203ENST00000573037 PLEKHG5O94827 1062 aa10.56□□□□□ -0.72
BCAR4-203ENST00000573037 RGL2O15211 777 aa10.53□□□□□ -0.72
BCAR4-203ENST00000573037 HAP1P54257 671 aaPredicted RBP10.51□□□□□ -0.73
BCAR4-203ENST00000573037 NPM1P06748 294 aaKnown RBP eCLIP10.5□□□□□ -0.73
BCAR4-203ENST00000573037 BBXQ8WY36 941 aaPredicted RBP10.5□□□□□ -0.73
BCAR4-203ENST00000573037 CIZ1Q9ULV3 898 aaPredicted RBP10.47□□□□□ -0.73
BCAR4-203ENST00000573037 SPDYE1Q8NFV5 336 aaPredicted RBP10.46□□□□□ -0.73
BCAR4-203ENST00000573037 PRKAR2AP13861 404 aaKnown RBP10.45□□□□□ -0.74
BCAR4-203ENST00000573037 TRIM41Q8WV44 630 aa10.45□□□□□ -0.74
BCAR4-203ENST00000573037 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.45□□□□□ -0.74
BCAR4-203ENST00000573037 CLEC11AQ9Y240 323 aa10.42□□□□□ -0.74
BCAR4-203ENST00000573037 LHX8Q68G74 356 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms