RNA–Protein interactions for RNA: ENST00000572761.1

LCMT1-206, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 2

Gene LCMT1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-206ENST00000572761 AEBP2Q6ZN18 517 aaPredicted RBP30.36■■■□□ 2.45
LCMT1-206ENST00000572761 CHIC1Q5VXU3 224 aa28.44■■■□□ 2.14
LCMT1-206ENST00000572761 SENP3Q9H4L4 574 aaPredicted RBP25.83■■□□□ 1.73
LCMT1-206ENST00000572761 PHF23Q9BUL5 403 aaPredicted RBP25.5■■□□□ 1.67
LCMT1-206ENST00000572761 FOXD1Q16676 465 aa24.19■■□□□ 1.46
LCMT1-206ENST00000572761 POTEDQ86YR6 584 aa22.8■■□□□ 1.24
LCMT1-206ENST00000572761 MSH5O43196 834 aa22.68■■□□□ 1.22
LCMT1-206ENST00000572761 PLPPR3Q6T4P5 718 aa22.51■■□□□ 1.19
LCMT1-206ENST00000572761 PIAS4Q8N2W9 510 aaPredicted RBP22.46■■□□□ 1.19
LCMT1-206ENST00000572761 PPP6R1Q9UPN7 881 aa22.4■■□□□ 1.18
LCMT1-206ENST00000572761 ADRA2BP18089 450 aa22.27■■□□□ 1.16
LCMT1-206ENST00000572761 MAPK8IP2Q13387 824 aaPredicted RBP20.59■□□□□ 0.89
LCMT1-206ENST00000572761 DMRT2Q9Y5R5 561 aa20.47■□□□□ 0.87
LCMT1-206ENST00000572761 SCAF1Q9H7N4 1312 aaKnown RBP20.26■□□□□ 0.83
LCMT1-206ENST00000572761 PPP4R3CPQ6ZMV5 832 aa19.73■□□□□ 0.75
LCMT1-206ENST00000572761 CACNB1Q02641 598 aaPredicted RBP19.68■□□□□ 0.74
LCMT1-206ENST00000572761 HOXD11P31277 338 aaPredicted RBP19.59■□□□□ 0.73
LCMT1-206ENST00000572761 DCAF8L1A6NGE4 600 aa19.58■□□□□ 0.72
LCMT1-206ENST00000572761 CNKSR2Q8WXI2 1034 aa19.41■□□□□ 0.7
LCMT1-206ENST00000572761 RNF39Q9H2S5 420 aa19.38■□□□□ 0.69
LCMT1-206ENST00000572761 RNF216Q9NWF9 866 aaPredicted RBP19.33■□□□□ 0.68
LCMT1-206ENST00000572761 C1QBPQ07021 282 aaKnown RBP19.04■□□□□ 0.64
LCMT1-206ENST00000572761 DNAJC5BQ9UF47 199 aa18.96■□□□□ 0.63
LCMT1-206ENST00000572761 NCBP3Q53F19 620 aaKnown RBP18.79■□□□□ 0.6
LCMT1-206ENST00000572761 NPM3O75607 178 aaKnown RBP18.61■□□□□ 0.57
LCMT1-206ENST00000572761 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.61■□□□□ 0.57
LCMT1-206ENST00000572761 U3KPZ7 1027 aaPredicted RBP18.25■□□□□ 0.51
LCMT1-206ENST00000572761 SPINK5Q9NQ38 1064 aaPredicted RBP18.09■□□□□ 0.49
LCMT1-206ENST00000572761 DSG3P32926 999 aa18.05■□□□□ 0.48
LCMT1-206ENST00000572761 CAPN15O75808 1086 aa18.01■□□□□ 0.47
LCMT1-206ENST00000572761 KCNA4P22459 653 aa17.96■□□□□ 0.47
LCMT1-206ENST00000572761 SLC4A2P04920 1241 aa17.9■□□□□ 0.46
LCMT1-206ENST00000572761 POTEHQ6S545 545 aa17.77■□□□□ 0.44
LCMT1-206ENST00000572761 TRHP20396 242 aaPredicted RBP17.65■□□□□ 0.42
LCMT1-206ENST00000572761 ABCB7O75027 752 aa17.6■□□□□ 0.41
LCMT1-206ENST00000572761 ZNF219Q9P2Y4 722 aaPredicted RBP17.58■□□□□ 0.4
LCMT1-206ENST00000572761 APLP2Q06481 763 aa17.56■□□□□ 0.4
LCMT1-206ENST00000572761 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.5■□□□□ 0.39
LCMT1-206ENST00000572761 HNRNPUL2Q1KMD3 747 aaKnown RBP17.5■□□□□ 0.39
LCMT1-206ENST00000572761 SAMD1Q6SPF0 538 aaPredicted RBP17.41■□□□□ 0.38
LCMT1-206ENST00000572761 MYCNP04198 464 aaPredicted RBP17.17■□□□□ 0.34
LCMT1-206ENST00000572761 RBM42Q9BTD8 480 aaKnown RBP17.13■□□□□ 0.33
LCMT1-206ENST00000572761 POLA2Q14181 598 aa17.11■□□□□ 0.33
LCMT1-206ENST00000572761 CHRDL2Q6WN34 429 aa16.95■□□□□ 0.3
LCMT1-206ENST00000572761 ATF5Q9Y2D1 282 aaPredicted RBP16.9■□□□□ 0.3
LCMT1-206ENST00000572761 SLC4A1APQ9BWU0 796 aaKnown RBP16.83■□□□□ 0.28
LCMT1-206ENST00000572761 FOXD4L1Q9NU39 408 aa16.82■□□□□ 0.28
LCMT1-206ENST00000572761 AKT1S1Q96B36 256 aa16.71■□□□□ 0.27
LCMT1-206ENST00000572761 ZBTB12Q9Y330 459 aaPredicted RBP16.66■□□□□ 0.26
LCMT1-206ENST00000572761 OSCARQ8IYS5 282 aa16.59■□□□□ 0.25
LCMT1-206ENST00000572761 REM2Q8IYK8 340 aaPredicted RBP16.58■□□□□ 0.24
LCMT1-206ENST00000572761 ZBTB22O15209 634 aa16.55■□□□□ 0.24
LCMT1-206ENST00000572761 PIP4P2Q8N4L2 257 aa16.5■□□□□ 0.23
LCMT1-206ENST00000572761 SP7Q8TDD2 431 aaPredicted RBP16.49■□□□□ 0.23
LCMT1-206ENST00000572761 PITPNM1O00562 1244 aa16.42■□□□□ 0.22
LCMT1-206ENST00000572761 FXR2P51116 673 aaKnown RBP eCLIP16.35■□□□□ 0.21
LCMT1-206ENST00000572761 ATXN8OSP0DMR3 200 aa16.32■□□□□ 0.2
LCMT1-206ENST00000572761 HAX1O00165 279 aa16.24■□□□□ 0.19
LCMT1-206ENST00000572761 SPDYE2BA6NHP3 402 aa16.18■□□□□ 0.18
LCMT1-206ENST00000572761 SPDYE6P0CI01 402 aa16.18■□□□□ 0.18
LCMT1-206ENST00000572761 SPDYE2Q495Y8 402 aa16.18■□□□□ 0.18
LCMT1-206ENST00000572761 FBLN2P98095 1184 aa16.12■□□□□ 0.17
LCMT1-206ENST00000572761 EVX2Q03828 476 aa16.12■□□□□ 0.17
LCMT1-206ENST00000572761 MKRN4PQ13434 485 aaPredicted RBP16.09■□□□□ 0.17
LCMT1-206ENST00000572761 PRKAR2AP13861 404 aaKnown RBP15.96■□□□□ 0.15
LCMT1-206ENST00000572761 CLEC11AQ9Y240 323 aa15.96■□□□□ 0.15
LCMT1-206ENST00000572761 SSUH2Q9Y2M2 353 aa15.96■□□□□ 0.15
LCMT1-206ENST00000572761 SPDYE1Q8NFV5 336 aaPredicted RBP15.95■□□□□ 0.14
LCMT1-206ENST00000572761 ZNF692Q9BU19 519 aaPredicted RBP15.92■□□□□ 0.14
LCMT1-206ENST00000572761 C19orf67A6NJJ6 358 aa15.84■□□□□ 0.13
LCMT1-206ENST00000572761 CHADLQ6NUI6 762 aa15.75■□□□□ 0.11
LCMT1-206ENST00000572761 PABPN1Q86U42 306 aaKnown RBP eCLIP15.7■□□□□ 0.1
LCMT1-206ENST00000572761 GABBR2O75899 941 aa15.69■□□□□ 0.1
LCMT1-206ENST00000572761 PRR29P0C7W0 189 aa15.64■□□□□ 0.09
LCMT1-206ENST00000572761 LHX8Q68G74 356 aa15.46■□□□□ 0.07
LCMT1-206ENST00000572761 CSRNP3Q8WYN3 585 aa15.46■□□□□ 0.07
LCMT1-206ENST00000572761 FARP1Q9Y4F1 1045 aaPredicted RBP15.45■□□□□ 0.06
LCMT1-206ENST00000572761 CD44P16070 742 aaKnown RBP15.43■□□□□ 0.06
LCMT1-206ENST00000572761 POTEIP0CG38 1075 aa15.4■□□□□ 0.06
LCMT1-206ENST00000572761 CREBZFQ9NS37 354 aa15.25■□□□□ 0.03
LCMT1-206ENST00000572761 CLCN6P51797 869 aa15.23■□□□□ 0.03
LCMT1-206ENST00000572761 ZNF579Q8NAF0 562 aaKnown RBP15.19■□□□□ 0.02
LCMT1-206ENST00000572761 ZRANB1Q9UGI0 708 aa15.16■□□□□ 0.02
LCMT1-206ENST00000572761 STAG3Q9UJ98 1225 aa15.14■□□□□ 0.01
LCMT1-206ENST00000572761 DCBLD2Q96PD2 775 aa15.13■□□□□ 0.01
LCMT1-206ENST00000572761 SPDYE4A6NLX3 237 aa15.08■□□□□ 0
LCMT1-206ENST00000572761 GALR2O43603 387 aaPredicted RBP15.06■□□□□ 0
LCMT1-206ENST00000572761 EHMT2Q96KQ7 1210 aa15.01□□□□□ -0.01
LCMT1-206ENST00000572761 MNX1P50219 401 aaPredicted RBP14.96□□□□□ -0.01
LCMT1-206ENST00000572761 PHF12Q96QT6 1004 aa14.95□□□□□ -0.02
LCMT1-206ENST00000572761 POTEB2H3BUK9 544 aa14.9□□□□□ -0.02
LCMT1-206ENST00000572761 PAK3O75914 559 aaPredicted RBP14.88□□□□□ -0.03
LCMT1-206ENST00000572761 OTUD5Q96G74 571 aa14.87□□□□□ -0.03
LCMT1-206ENST00000572761 NPM1P06748 294 aaKnown RBP eCLIP14.85□□□□□ -0.03
LCMT1-206ENST00000572761 PELP1Q8IZL8 1130 aaKnown RBP14.83□□□□□ -0.04
LCMT1-206ENST00000572761 MS4A3Q96HJ5 214 aa14.74□□□□□ -0.05
LCMT1-206ENST00000572761 PROM2Q8N271 834 aa14.73□□□□□ -0.05
LCMT1-206ENST00000572761 ASTLQ6HA08 431 aaPredicted RBP14.71□□□□□ -0.05
LCMT1-206ENST00000572761 PLSCR2Q9NRY7 297 aa14.71□□□□□ -0.05
LCMT1-206ENST00000572761 ATMINO43313 823 aaPredicted RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms