RNA–Protein interactions for RNA: ENST00000570623.1

TOM1L1-206, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1L1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-206ENST00000570623 AEBP2Q6ZN18 517 aaPredicted RBP24.69■■□□□ 1.54
TOM1L1-206ENST00000570623 CHIC1Q5VXU3 224 aa23.02■■□□□ 1.28
TOM1L1-206ENST00000570623 SENP3Q9H4L4 574 aaPredicted RBP20.98■□□□□ 0.95
TOM1L1-206ENST00000570623 PHF23Q9BUL5 403 aaPredicted RBP20.73■□□□□ 0.91
TOM1L1-206ENST00000570623 FOXD1Q16676 465 aa19.69■□□□□ 0.74
TOM1L1-206ENST00000570623 POTEDQ86YR6 584 aa18.7■□□□□ 0.58
TOM1L1-206ENST00000570623 MSH5O43196 834 aa18.45■□□□□ 0.54
TOM1L1-206ENST00000570623 PIAS4Q8N2W9 510 aaPredicted RBP18.29■□□□□ 0.52
TOM1L1-206ENST00000570623 PLPPR3Q6T4P5 718 aa18.19■□□□□ 0.5
TOM1L1-206ENST00000570623 PPP6R1Q9UPN7 881 aa18.19■□□□□ 0.5
TOM1L1-206ENST00000570623 ADRA2BP18089 450 aa18.1■□□□□ 0.49
TOM1L1-206ENST00000570623 MAPK8IP2Q13387 824 aaPredicted RBP16.76■□□□□ 0.27
TOM1L1-206ENST00000570623 DMRT2Q9Y5R5 561 aa16.61■□□□□ 0.25
TOM1L1-206ENST00000570623 SCAF1Q9H7N4 1312 aaKnown RBP16.41■□□□□ 0.22
TOM1L1-206ENST00000570623 CACNB1Q02641 598 aaPredicted RBP16.1■□□□□ 0.17
TOM1L1-206ENST00000570623 DCAF8L1A6NGE4 600 aa15.99■□□□□ 0.15
TOM1L1-206ENST00000570623 PPP4R3CPQ6ZMV5 832 aa15.95■□□□□ 0.14
TOM1L1-206ENST00000570623 HOXD11P31277 338 aaPredicted RBP15.86■□□□□ 0.13
TOM1L1-206ENST00000570623 KCNA4P22459 653 aa15.83■□□□□ 0.12
TOM1L1-206ENST00000570623 RNF39Q9H2S5 420 aa15.77■□□□□ 0.12
TOM1L1-206ENST00000570623 CNKSR2Q8WXI2 1034 aa15.68■□□□□ 0.1
TOM1L1-206ENST00000570623 RNF216Q9NWF9 866 aaPredicted RBP15.64■□□□□ 0.09
TOM1L1-206ENST00000570623 C1QBPQ07021 282 aaKnown RBP15.46■□□□□ 0.07
TOM1L1-206ENST00000570623 EHMT2Q96KQ7 1210 aa15.46■□□□□ 0.07
TOM1L1-206ENST00000570623 NCBP3Q53F19 620 aaKnown RBP15.29■□□□□ 0.04
TOM1L1-206ENST00000570623 DNAJC5BQ9UF47 199 aa15.28■□□□□ 0.04
TOM1L1-206ENST00000570623 SLC4A1APQ9BWU0 796 aaKnown RBP15.2■□□□□ 0.02
TOM1L1-206ENST00000570623 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.12■□□□□ 0.017e-9■■■□□ 15.8
TOM1L1-206ENST00000570623 NPM3O75607 178 aaKnown RBP15.04■□□□□ -0
TOM1L1-206ENST00000570623 CSRNP3Q8WYN3 585 aa15.01□□□□□ -0.01
TOM1L1-206ENST00000570623 U3KPZ7 1027 aaPredicted RBP14.81□□□□□ -0.04
TOM1L1-206ENST00000570623 SPINK5Q9NQ38 1064 aaPredicted RBP14.73□□□□□ -0.05
TOM1L1-206ENST00000570623 CAPN15O75808 1086 aa14.67□□□□□ -0.06
TOM1L1-206ENST00000570623 DSG3P32926 999 aa14.67□□□□□ -0.06
TOM1L1-206ENST00000570623 ZBTB22O15209 634 aa14.57□□□□□ -0.08
TOM1L1-206ENST00000570623 POTEHQ6S545 545 aa14.56□□□□□ -0.08
TOM1L1-206ENST00000570623 SLC4A2P04920 1241 aa14.48□□□□□ -0.09
TOM1L1-206ENST00000570623 FOXD4L1Q9NU39 408 aa14.42□□□□□ -0.1
TOM1L1-206ENST00000570623 TRHP20396 242 aaPredicted RBP14.37□□□□□ -0.11
TOM1L1-206ENST00000570623 ABCB7O75027 752 aa14.35□□□□□ -0.11
TOM1L1-206ENST00000570623 ZNF219Q9P2Y4 722 aaPredicted RBP14.24□□□□□ -0.13
TOM1L1-206ENST00000570623 APLP2Q06481 763 aa14.19□□□□□ -0.14
TOM1L1-206ENST00000570623 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.12□□□□□ -0.15
TOM1L1-206ENST00000570623 HNRNPUL2Q1KMD3 747 aaKnown RBP14.12□□□□□ -0.15
TOM1L1-206ENST00000570623 SAMD1Q6SPF0 538 aaPredicted RBP14.06□□□□□ -0.16
TOM1L1-206ENST00000570623 MYCNP04198 464 aaPredicted RBP13.91□□□□□ -0.18
TOM1L1-206ENST00000570623 RBM42Q9BTD8 480 aaKnown RBP13.91□□□□□ -0.18
TOM1L1-206ENST00000570623 POLA2Q14181 598 aa13.9□□□□□ -0.18
TOM1L1-206ENST00000570623 ATXN8OSP0DMR3 200 aa13.89□□□□□ -0.19
TOM1L1-206ENST00000570623 CHRDL2Q6WN34 429 aa13.82□□□□□ -0.2
TOM1L1-206ENST00000570623 ATF5Q9Y2D1 282 aaPredicted RBP13.69□□□□□ -0.22
TOM1L1-206ENST00000570623 AKT1S1Q96B36 256 aa13.54□□□□□ -0.24
TOM1L1-206ENST00000570623 FKBP8Q14318 412 aa13.53□□□□□ -0.24
TOM1L1-206ENST00000570623 OSCARQ8IYS5 282 aa13.49□□□□□ -0.25
TOM1L1-206ENST00000570623 REM2Q8IYK8 340 aaPredicted RBP13.48□□□□□ -0.25
TOM1L1-206ENST00000570623 AMER1Q5JTC6 1135 aaPredicted RBP13.47□□□□□ -0.25
TOM1L1-206ENST00000570623 SP7Q8TDD2 431 aaPredicted RBP13.47□□□□□ -0.25
TOM1L1-206ENST00000570623 ZBTB12Q9Y330 459 aaPredicted RBP13.46□□□□□ -0.25
TOM1L1-206ENST00000570623 PIP4P2Q8N4L2 257 aa13.43□□□□□ -0.26
TOM1L1-206ENST00000570623 RTN4Q9NQC3 1192 aaKnown RBP13.42□□□□□ -0.26
TOM1L1-206ENST00000570623 PITPNM1O00562 1244 aa13.35□□□□□ -0.27
TOM1L1-206ENST00000570623 HAX1O00165 279 aa13.28□□□□□ -0.28
TOM1L1-206ENST00000570623 FXR2P51116 673 aaKnown RBP eCLIP13.28□□□□□ -0.28
TOM1L1-206ENST00000570623 EVX2Q03828 476 aa13.18□□□□□ -0.3
TOM1L1-206ENST00000570623 SLC24A1O60721 1099 aa13.16□□□□□ -0.3
TOM1L1-206ENST00000570623 SPDYE2BA6NHP3 402 aa13.06□□□□□ -0.32
TOM1L1-206ENST00000570623 SPDYE6P0CI01 402 aa13.06□□□□□ -0.32
TOM1L1-206ENST00000570623 SPDYE2Q495Y8 402 aa13.06□□□□□ -0.32
TOM1L1-206ENST00000570623 FBLN2P98095 1184 aa13.03□□□□□ -0.32
TOM1L1-206ENST00000570623 MKRN4PQ13434 485 aaPredicted RBP13.01□□□□□ -0.33
TOM1L1-206ENST00000570623 PRKAR2AP13861 404 aaKnown RBP12.99□□□□□ -0.33
TOM1L1-206ENST00000570623 CLEC11AQ9Y240 323 aa12.99□□□□□ -0.33
TOM1L1-206ENST00000570623 SPDYE4A6NLX3 237 aa12.93□□□□□ -0.34
TOM1L1-206ENST00000570623 SPDYE1Q8NFV5 336 aaPredicted RBP12.93□□□□□ -0.34
TOM1L1-206ENST00000570623 FBXO3Q9UK99 471 aa12.92□□□□□ -0.34
TOM1L1-206ENST00000570623 ZNF692Q9BU19 519 aaPredicted RBP12.9□□□□□ -0.34
TOM1L1-206ENST00000570623 SSUH2Q9Y2M2 353 aa12.89□□□□□ -0.35
TOM1L1-206ENST00000570623 C19orf67A6NJJ6 358 aa12.87□□□□□ -0.35
TOM1L1-206ENST00000570623 PROM2Q8N271 834 aa12.84□□□□□ -0.35
TOM1L1-206ENST00000570623 CHADLQ6NUI6 762 aa12.83□□□□□ -0.36
TOM1L1-206ENST00000570623 GABBR2O75899 941 aa12.79□□□□□ -0.36
TOM1L1-206ENST00000570623 PABPN1Q86U42 306 aaKnown RBP eCLIP12.72□□□□□ -0.37
TOM1L1-206ENST00000570623 VASPP50552 380 aaPredicted RBP12.71□□□□□ -0.37
TOM1L1-206ENST00000570623 PRR29P0C7W0 189 aa12.69□□□□□ -0.38
TOM1L1-206ENST00000570623 LHX8Q68G74 356 aa12.65□□□□□ -0.38
TOM1L1-206ENST00000570623 POTEIP0CG38 1075 aa12.57□□□□□ -0.4
TOM1L1-206ENST00000570623 IFNLR1Q8IU57 520 aaPredicted RBP12.56□□□□□ -0.4
TOM1L1-206ENST00000570623 CD44P16070 742 aaKnown RBP12.55□□□□□ -0.4
TOM1L1-206ENST00000570623 FARP1Q9Y4F1 1045 aaPredicted RBP12.54□□□□□ -0.4
TOM1L1-206ENST00000570623 PLCB2Q00722 1185 aa12.41□□□□□ -0.42
TOM1L1-206ENST00000570623 PKD2Q13563 968 aa12.39□□□□□ -0.43
TOM1L1-206ENST00000570623 STAG3Q9UJ98 1225 aa12.37□□□□□ -0.43
TOM1L1-206ENST00000570623 DCAF8L2P0C7V8 631 aa12.34□□□□□ -0.43
TOM1L1-206ENST00000570623 CREBZFQ9NS37 354 aa12.34□□□□□ -0.43
TOM1L1-206ENST00000570623 SPOCK2Q92563 424 aa12.33□□□□□ -0.44
TOM1L1-206ENST00000570623 DCBLD2Q96PD2 775 aa12.33□□□□□ -0.44
TOM1L1-206ENST00000570623 ZRANB1Q9UGI0 708 aa12.33□□□□□ -0.44
TOM1L1-206ENST00000570623 ZNF579Q8NAF0 562 aaKnown RBP12.32□□□□□ -0.44
TOM1L1-206ENST00000570623 KLHL34Q8N239 644 aa12.31□□□□□ -0.44
TOM1L1-206ENST00000570623 CLCN6P51797 869 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms