RNA–Protein interactions for RNA: ENST00000569828.1

CSNK1A1P1-203, Transcript of casein kinase 1 alpha 1 pseudogene 1, humanhuman

TSL 3

Gene CSNK1A1P1, Length 291 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P1-203ENST00000569828 AEBP2Q6ZN18 517 aaPredicted RBP22.64■■□□□ 1.21
CSNK1A1P1-203ENST00000569828 CHIC1Q5VXU3 224 aa21.72■■□□□ 1.07
CSNK1A1P1-203ENST00000569828 SENP3Q9H4L4 574 aaPredicted RBP19.41■□□□□ 0.7
CSNK1A1P1-203ENST00000569828 PHF23Q9BUL5 403 aaPredicted RBP19.13■□□□□ 0.65
CSNK1A1P1-203ENST00000569828 FOXD1Q16676 465 aa18■□□□□ 0.47
CSNK1A1P1-203ENST00000569828 PLPPR3Q6T4P5 718 aa17.45■□□□□ 0.38
CSNK1A1P1-203ENST00000569828 MSH5O43196 834 aa16.89■□□□□ 0.29
CSNK1A1P1-203ENST00000569828 PPP6R1Q9UPN7 881 aa16.89■□□□□ 0.29
CSNK1A1P1-203ENST00000569828 PIAS4Q8N2W9 510 aaPredicted RBP16.88■□□□□ 0.29
CSNK1A1P1-203ENST00000569828 ADRA2BP18089 450 aa16.86■□□□□ 0.29
CSNK1A1P1-203ENST00000569828 POTEDQ86YR6 584 aa16.16■□□□□ 0.18
CSNK1A1P1-203ENST00000569828 SCAF1Q9H7N4 1312 aaKnown RBP15.57■□□□□ 0.08
CSNK1A1P1-203ENST00000569828 MAPK8IP2Q13387 824 aaPredicted RBP15.42■□□□□ 0.06
CSNK1A1P1-203ENST00000569828 DMRT2Q9Y5R5 561 aa15.4■□□□□ 0.06
CSNK1A1P1-203ENST00000569828 PPP4R3CPQ6ZMV5 832 aa15.27■□□□□ 0.04
CSNK1A1P1-203ENST00000569828 CNKSR2Q8WXI2 1034 aa15□□□□□ -0.01
CSNK1A1P1-203ENST00000569828 HOXD11P31277 338 aaPredicted RBP14.89□□□□□ -0.03
CSNK1A1P1-203ENST00000569828 RNF216Q9NWF9 866 aaPredicted RBP14.82□□□□□ -0.04
CSNK1A1P1-203ENST00000569828 NCBP3Q53F19 620 aaKnown RBP14.81□□□□□ -0.04
CSNK1A1P1-203ENST00000569828 DCAF8L1A6NGE4 600 aa14.71□□□□□ -0.05
CSNK1A1P1-203ENST00000569828 NPM3O75607 178 aaKnown RBP14.5□□□□□ -0.09
CSNK1A1P1-203ENST00000569828 DNAJC5BQ9UF47 199 aa14.44□□□□□ -0.1
CSNK1A1P1-203ENST00000569828 RNF39Q9H2S5 420 aa14.38□□□□□ -0.11
CSNK1A1P1-203ENST00000569828 CACNB1Q02641 598 aaPredicted RBP14.35□□□□□ -0.11
CSNK1A1P1-203ENST00000569828 KCNA4P22459 653 aa14.32□□□□□ -0.12
CSNK1A1P1-203ENST00000569828 C1QBPQ07021 282 aaKnown RBP14.22□□□□□ -0.13
CSNK1A1P1-203ENST00000569828 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.18□□□□□ -0.14
CSNK1A1P1-203ENST00000569828 U3KPZ7 1027 aaPredicted RBP13.86□□□□□ -0.19
CSNK1A1P1-203ENST00000569828 SLC4A2P04920 1241 aa13.79□□□□□ -0.2
CSNK1A1P1-203ENST00000569828 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.64□□□□□ -0.23
CSNK1A1P1-203ENST00000569828 HNRNPUL2Q1KMD3 747 aaKnown RBP13.64□□□□□ -0.23
CSNK1A1P1-203ENST00000569828 APLP2Q06481 763 aa13.63□□□□□ -0.23
CSNK1A1P1-203ENST00000569828 CAPN15O75808 1086 aa13.61□□□□□ -0.23
CSNK1A1P1-203ENST00000569828 SLC4A1APQ9BWU0 796 aaKnown RBP13.59□□□□□ -0.23
CSNK1A1P1-203ENST00000569828 SPINK5Q9NQ38 1064 aaPredicted RBP13.59□□□□□ -0.23
CSNK1A1P1-203ENST00000569828 SAMD1Q6SPF0 538 aaPredicted RBP13.54□□□□□ -0.24
CSNK1A1P1-203ENST00000569828 DSG3P32926 999 aa13.49□□□□□ -0.25
CSNK1A1P1-203ENST00000569828 MYCNP04198 464 aaPredicted RBP13.46□□□□□ -0.25
CSNK1A1P1-203ENST00000569828 ZNF219Q9P2Y4 722 aaPredicted RBP13.46□□□□□ -0.25
CSNK1A1P1-203ENST00000569828 TRHP20396 242 aaPredicted RBP13.4□□□□□ -0.26
CSNK1A1P1-203ENST00000569828 FOXD4L1Q9NU39 408 aa13.38□□□□□ -0.27
CSNK1A1P1-203ENST00000569828 ABCB7O75027 752 aa13.25□□□□□ -0.29
CSNK1A1P1-203ENST00000569828 ZBTB22O15209 634 aa13.13□□□□□ -0.31
CSNK1A1P1-203ENST00000569828 POLA2Q14181 598 aa13.08□□□□□ -0.32
CSNK1A1P1-203ENST00000569828 ATF5Q9Y2D1 282 aaPredicted RBP13.03□□□□□ -0.32
CSNK1A1P1-203ENST00000569828 ATXN8OSP0DMR3 200 aa13.02□□□□□ -0.33
CSNK1A1P1-203ENST00000569828 RBM42Q9BTD8 480 aaKnown RBP12.96□□□□□ -0.33
CSNK1A1P1-203ENST00000569828 ZBTB12Q9Y330 459 aaPredicted RBP12.94□□□□□ -0.34
CSNK1A1P1-203ENST00000569828 POTEHQ6S545 545 aa12.72□□□□□ -0.37
CSNK1A1P1-203ENST00000569828 CSRNP3Q8WYN3 585 aa12.68□□□□□ -0.38
CSNK1A1P1-203ENST00000569828 AKT1S1Q96B36 256 aa12.66□□□□□ -0.38
CSNK1A1P1-203ENST00000569828 FBLN2P98095 1184 aa12.64□□□□□ -0.39
CSNK1A1P1-203ENST00000569828 OSCARQ8IYS5 282 aa12.64□□□□□ -0.39
CSNK1A1P1-203ENST00000569828 EHMT2Q96KQ7 1210 aa12.57□□□□□ -0.4
CSNK1A1P1-203ENST00000569828 CHRDL2Q6WN34 429 aa12.55□□□□□ -0.4
CSNK1A1P1-203ENST00000569828 SPDYE2BA6NHP3 402 aa12.51□□□□□ -0.41
CSNK1A1P1-203ENST00000569828 SPDYE6P0CI01 402 aa12.51□□□□□ -0.41
CSNK1A1P1-203ENST00000569828 SPDYE2Q495Y8 402 aa12.51□□□□□ -0.41
CSNK1A1P1-203ENST00000569828 REM2Q8IYK8 340 aaPredicted RBP12.49□□□□□ -0.41
CSNK1A1P1-203ENST00000569828 MKRN4PQ13434 485 aaPredicted RBP12.47□□□□□ -0.41
CSNK1A1P1-203ENST00000569828 PITPNM1O00562 1244 aa12.34□□□□□ -0.43
CSNK1A1P1-203ENST00000569828 ZNF692Q9BU19 519 aaPredicted RBP12.34□□□□□ -0.43
CSNK1A1P1-203ENST00000569828 SSUH2Q9Y2M2 353 aa12.32□□□□□ -0.44
CSNK1A1P1-203ENST00000569828 PIP4P2Q8N4L2 257 aa12.27□□□□□ -0.45
CSNK1A1P1-203ENST00000569828 SPDYE1Q8NFV5 336 aaPredicted RBP12.26□□□□□ -0.45
CSNK1A1P1-203ENST00000569828 FXR2P51116 673 aaKnown RBP eCLIP12.24□□□□□ -0.45
CSNK1A1P1-203ENST00000569828 CLEC11AQ9Y240 323 aa12.16□□□□□ -0.46
CSNK1A1P1-203ENST00000569828 PABPN1Q86U42 306 aaKnown RBP eCLIP12.15□□□□□ -0.46
CSNK1A1P1-203ENST00000569828 PRKAR2AP13861 404 aaKnown RBP12.04□□□□□ -0.48
CSNK1A1P1-203ENST00000569828 PRR29P0C7W0 189 aa12.02□□□□□ -0.49
CSNK1A1P1-203ENST00000569828 HAX1O00165 279 aa12.01□□□□□ -0.49
CSNK1A1P1-203ENST00000569828 SPDYE4A6NLX3 237 aa12□□□□□ -0.49
CSNK1A1P1-203ENST00000569828 SP7Q8TDD2 431 aaPredicted RBP11.99□□□□□ -0.49
CSNK1A1P1-203ENST00000569828 STAG3Q9UJ98 1225 aa11.94□□□□□ -0.5
CSNK1A1P1-203ENST00000569828 CHADLQ6NUI6 762 aa11.87□□□□□ -0.51
CSNK1A1P1-203ENST00000569828 C19orf67A6NJJ6 358 aa11.84□□□□□ -0.51
CSNK1A1P1-203ENST00000569828 EVX2Q03828 476 aa11.79□□□□□ -0.52
CSNK1A1P1-203ENST00000569828 FARP1Q9Y4F1 1045 aaPredicted RBP11.78□□□□□ -0.52
CSNK1A1P1-203ENST00000569828 PROM2Q8N271 834 aa11.75□□□□□ -0.53
CSNK1A1P1-203ENST00000569828 CREBZFQ9NS37 354 aa11.72□□□□□ -0.53
CSNK1A1P1-203ENST00000569828 CD44P16070 742 aaKnown RBP11.67□□□□□ -0.54
CSNK1A1P1-203ENST00000569828 CLCN6P51797 869 aa11.62□□□□□ -0.55
CSNK1A1P1-203ENST00000569828 GABBR2O75899 941 aa11.61□□□□□ -0.55
CSNK1A1P1-203ENST00000569828 NPM1P06748 294 aaKnown RBP eCLIP11.59□□□□□ -0.55
CSNK1A1P1-203ENST00000569828 MNX1P50219 401 aaPredicted RBP11.53□□□□□ -0.56
CSNK1A1P1-203ENST00000569828 PAK3O75914 559 aaPredicted RBP11.52□□□□□ -0.57
CSNK1A1P1-203ENST00000569828 ZNF579Q8NAF0 562 aaKnown RBP11.52□□□□□ -0.57
CSNK1A1P1-203ENST00000569828 ZRANB1Q9UGI0 708 aa11.52□□□□□ -0.57
CSNK1A1P1-203ENST00000569828 PLEKHG5O94827 1062 aa11.5□□□□□ -0.57
CSNK1A1P1-203ENST00000569828 FKBP8Q14318 412 aa11.5□□□□□ -0.57
CSNK1A1P1-203ENST00000569828 MIER1Q8N108 512 aa11.44□□□□□ -0.58
CSNK1A1P1-203ENST00000569828 PLCD3Q8N3E9 789 aa11.37□□□□□ -0.59
CSNK1A1P1-203ENST00000569828 DCBLD2Q96PD2 775 aa11.36□□□□□ -0.59
CSNK1A1P1-203ENST00000569828 ZBTB47Q9UFB7 747 aaPredicted RBP11.35□□□□□ -0.59
CSNK1A1P1-203ENST00000569828 PHF12Q96QT6 1004 aa11.33□□□□□ -0.6
CSNK1A1P1-203ENST00000569828 FBXO3Q9UK99 471 aa11.33□□□□□ -0.6
CSNK1A1P1-203ENST00000569828 POTEIP0CG38 1075 aa11.32□□□□□ -0.6
CSNK1A1P1-203ENST00000569828 GALR2O43603 387 aaPredicted RBP11.31□□□□□ -0.6
CSNK1A1P1-203ENST00000569828 TSPYL2Q9H2G4 693 aaPredicted RBP11.29□□□□□ -0.6
CSNK1A1P1-203ENST00000569828 CCDC61Q9Y6R9 512 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms