RNA–Protein interactions for RNA: ENST00000568748.1

TMED6-202, Transcript of transmembrane p24 trafficking protein 6, humanhuman

TSL 2

Gene TMED6, Length 774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED6-202ENST00000568748 AEBP2Q6ZN18 517 aaPredicted RBP29.29■■■□□ 2.28
TMED6-202ENST00000568748 CHIC1Q5VXU3 224 aa28.14■■■□□ 2.1
TMED6-202ENST00000568748 SENP3Q9H4L4 574 aaPredicted RBP25.01■■□□□ 1.59
TMED6-202ENST00000568748 PHF23Q9BUL5 403 aaPredicted RBP24.68■■□□□ 1.54
TMED6-202ENST00000568748 FOXD1Q16676 465 aa23.22■■□□□ 1.31
TMED6-202ENST00000568748 PLPPR3Q6T4P5 718 aa22.63■■□□□ 1.21
TMED6-202ENST00000568748 PPP6R1Q9UPN7 881 aa21.9■■□□□ 1.1
TMED6-202ENST00000568748 ADRA2BP18089 450 aa21.84■■□□□ 1.09
TMED6-202ENST00000568748 PIAS4Q8N2W9 510 aaPredicted RBP21.77■■□□□ 1.08
TMED6-202ENST00000568748 MSH5O43196 834 aa21.69■■□□□ 1.06
TMED6-202ENST00000568748 POTEDQ86YR6 584 aa20.62■□□□□ 0.89
TMED6-202ENST00000568748 SCAF1Q9H7N4 1312 aaKnown RBP20.09■□□□□ 0.81
TMED6-202ENST00000568748 MAPK8IP2Q13387 824 aaPredicted RBP19.96■□□□□ 0.79
TMED6-202ENST00000568748 DMRT2Q9Y5R5 561 aa19.87■□□□□ 0.77
TMED6-202ENST00000568748 PPP4R3CPQ6ZMV5 832 aa19.84■□□□□ 0.77
TMED6-202ENST00000568748 CNKSR2Q8WXI2 1034 aa19.44■□□□□ 0.7
TMED6-202ENST00000568748 HOXD11P31277 338 aaPredicted RBP19.27■□□□□ 0.68
TMED6-202ENST00000568748 NCBP3Q53F19 620 aaKnown RBP19.21■□□□□ 0.67
TMED6-202ENST00000568748 RNF216Q9NWF9 866 aaPredicted RBP19.2■□□□□ 0.66
TMED6-202ENST00000568748 DCAF8L1A6NGE4 600 aa18.96■□□□□ 0.63
TMED6-202ENST00000568748 NPM3O75607 178 aaKnown RBP18.89■□□□□ 0.61
TMED6-202ENST00000568748 KCNA4P22459 653 aa18.75■□□□□ 0.59
TMED6-202ENST00000568748 DNAJC5BQ9UF47 199 aa18.62■□□□□ 0.57
TMED6-202ENST00000568748 RNF39Q9H2S5 420 aa18.51■□□□□ 0.55
TMED6-202ENST00000568748 CACNB1Q02641 598 aaPredicted RBP18.38■□□□□ 0.53
TMED6-202ENST00000568748 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.32■□□□□ 0.52
TMED6-202ENST00000568748 C1QBPQ07021 282 aaKnown RBP18.29■□□□□ 0.52
TMED6-202ENST00000568748 U3KPZ7 1027 aaPredicted RBP17.97■□□□□ 0.47
TMED6-202ENST00000568748 SLC4A2P04920 1241 aa17.96■□□□□ 0.47
TMED6-202ENST00000568748 SLC4A1APQ9BWU0 796 aaKnown RBP17.78■□□□□ 0.44
TMED6-202ENST00000568748 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.63■□□□□ 0.41
TMED6-202ENST00000568748 HNRNPUL2Q1KMD3 747 aaKnown RBP17.63■□□□□ 0.41
TMED6-202ENST00000568748 APLP2Q06481 763 aa17.59■□□□□ 0.41
TMED6-202ENST00000568748 SPINK5Q9NQ38 1064 aaPredicted RBP17.58■□□□□ 0.4
TMED6-202ENST00000568748 CAPN15O75808 1086 aa17.55■□□□□ 0.4
TMED6-202ENST00000568748 SAMD1Q6SPF0 538 aaPredicted RBP17.52■□□□□ 0.4
TMED6-202ENST00000568748 MYCNP04198 464 aaPredicted RBP17.5■□□□□ 0.39
TMED6-202ENST00000568748 FOXD4L1Q9NU39 408 aa17.46■□□□□ 0.39
TMED6-202ENST00000568748 DSG3P32926 999 aa17.41■□□□□ 0.38
TMED6-202ENST00000568748 ZNF219Q9P2Y4 722 aaPredicted RBP17.39■□□□□ 0.37
TMED6-202ENST00000568748 TRHP20396 242 aaPredicted RBP17.34■□□□□ 0.37
TMED6-202ENST00000568748 ZBTB22O15209 634 aa17.23■□□□□ 0.35
TMED6-202ENST00000568748 ABCB7O75027 752 aa17.14■□□□□ 0.33
TMED6-202ENST00000568748 ATF5Q9Y2D1 282 aaPredicted RBP16.99■□□□□ 0.31
TMED6-202ENST00000568748 ATXN8OSP0DMR3 200 aa16.95■□□□□ 0.3
TMED6-202ENST00000568748 POLA2Q14181 598 aa16.95■□□□□ 0.3
TMED6-202ENST00000568748 CSRNP3Q8WYN3 585 aa16.71■□□□□ 0.27
TMED6-202ENST00000568748 ZBTB12Q9Y330 459 aaPredicted RBP16.71■□□□□ 0.27
TMED6-202ENST00000568748 RBM42Q9BTD8 480 aaKnown RBP16.66■□□□□ 0.26
TMED6-202ENST00000568748 EHMT2Q96KQ7 1210 aa16.6■□□□□ 0.25
TMED6-202ENST00000568748 FBLN2P98095 1184 aa16.38■□□□□ 0.21
TMED6-202ENST00000568748 OSCARQ8IYS5 282 aa16.38■□□□□ 0.21
TMED6-202ENST00000568748 AKT1S1Q96B36 256 aa16.32■□□□□ 0.2
TMED6-202ENST00000568748 MKRN4PQ13434 485 aaPredicted RBP16.25■□□□□ 0.19
TMED6-202ENST00000568748 POTEHQ6S545 545 aa16.22■□□□□ 0.19
TMED6-202ENST00000568748 SPDYE2BA6NHP3 402 aa16.19■□□□□ 0.18
TMED6-202ENST00000568748 SPDYE6P0CI01 402 aa16.19■□□□□ 0.18
TMED6-202ENST00000568748 SPDYE2Q495Y8 402 aa16.19■□□□□ 0.18
TMED6-202ENST00000568748 CHRDL2Q6WN34 429 aa16.13■□□□□ 0.17
TMED6-202ENST00000568748 REM2Q8IYK8 340 aaPredicted RBP16.13■□□□□ 0.17
TMED6-202ENST00000568748 ZNF692Q9BU19 519 aaPredicted RBP16.01■□□□□ 0.15
TMED6-202ENST00000568748 SSUH2Q9Y2M2 353 aa16■□□□□ 0.15
TMED6-202ENST00000568748 PITPNM1O00562 1244 aa15.94■□□□□ 0.14
TMED6-202ENST00000568748 SPDYE1Q8NFV5 336 aaPredicted RBP15.83■□□□□ 0.12
TMED6-202ENST00000568748 PIP4P2Q8N4L2 257 aa15.8■□□□□ 0.12
TMED6-202ENST00000568748 FXR2P51116 673 aaKnown RBP eCLIP15.78■□□□□ 0.12
TMED6-202ENST00000568748 PABPN1Q86U42 306 aaKnown RBP eCLIP15.77■□□□□ 0.12
TMED6-202ENST00000568748 CLEC11AQ9Y240 323 aa15.73■□□□□ 0.11
TMED6-202ENST00000568748 SPDYE4A6NLX3 237 aa15.65■□□□□ 0.1
TMED6-202ENST00000568748 PRR29P0C7W0 189 aa15.55■□□□□ 0.08
TMED6-202ENST00000568748 PRKAR2AP13861 404 aaKnown RBP15.54■□□□□ 0.08
TMED6-202ENST00000568748 STAG3Q9UJ98 1225 aa15.46■□□□□ 0.07
TMED6-202ENST00000568748 HAX1O00165 279 aa15.43■□□□□ 0.06
TMED6-202ENST00000568748 CHADLQ6NUI6 762 aa15.38■□□□□ 0.05
TMED6-202ENST00000568748 PROM2Q8N271 834 aa15.36■□□□□ 0.05
TMED6-202ENST00000568748 SP7Q8TDD2 431 aaPredicted RBP15.36■□□□□ 0.05
TMED6-202ENST00000568748 C19orf67A6NJJ6 358 aa15.26■□□□□ 0.03
TMED6-202ENST00000568748 FARP1Q9Y4F1 1045 aaPredicted RBP15.24■□□□□ 0.03
TMED6-202ENST00000568748 EVX2Q03828 476 aa15.22■□□□□ 0.03
TMED6-202ENST00000568748 CREBZFQ9NS37 354 aa15.22■□□□□ 0.03
TMED6-202ENST00000568748 FKBP8Q14318 412 aa15.13■□□□□ 0.01
TMED6-202ENST00000568748 CD44P16070 742 aaKnown RBP15.07■□□□□ 0
TMED6-202ENST00000568748 MNX1P50219 401 aaPredicted RBP15□□□□□ -0.01
TMED6-202ENST00000568748 NPM1P06748 294 aaKnown RBP eCLIP14.99□□□□□ -0.01
TMED6-202ENST00000568748 GABBR2O75899 941 aa14.94□□□□□ -0.02
TMED6-202ENST00000568748 CLCN6P51797 869 aa14.92□□□□□ -0.02
TMED6-202ENST00000568748 PLEKHG5O94827 1062 aa14.91□□□□□ -0.02
TMED6-202ENST00000568748 ZRANB1Q9UGI0 708 aa14.89□□□□□ -0.03
TMED6-202ENST00000568748 PAK3O75914 559 aaPredicted RBP14.88□□□□□ -0.03
TMED6-202ENST00000568748 MIER1Q8N108 512 aa14.88□□□□□ -0.03
TMED6-202ENST00000568748 ZNF579Q8NAF0 562 aaKnown RBP14.88□□□□□ -0.03
TMED6-202ENST00000568748 FBXO3Q9UK99 471 aa14.82□□□□□ -0.04
TMED6-202ENST00000568748 PLCD3Q8N3E9 789 aa14.81□□□□□ -0.04
TMED6-202ENST00000568748 ZBTB47Q9UFB7 747 aaPredicted RBP14.75□□□□□ -0.05
TMED6-202ENST00000568748 PHF12Q96QT6 1004 aa14.68□□□□□ -0.06
TMED6-202ENST00000568748 TSPYL2Q9H2G4 693 aaPredicted RBP14.66□□□□□ -0.06
TMED6-202ENST00000568748 GALR2O43603 387 aaPredicted RBP14.62□□□□□ -0.07
TMED6-202ENST00000568748 RASEFQ8IZ41 740 aa14.62□□□□□ -0.07
TMED6-202ENST00000568748 CCDC61Q9Y6R9 512 aa14.62□□□□□ -0.07
TMED6-202ENST00000568748 DCBLD2Q96PD2 775 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms