RNA–Protein interactions for RNA: ENST00000567957.1

ITFG1-210, Transcript of integrin alpha FG-GAP repeat containing 1, humanhuman

TSL 2

Gene ITFG1, Length 924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITFG1-210ENST00000567957 AEBP2Q6ZN18 517 aaPredicted RBP33.05■■■□□ 2.88
ITFG1-210ENST00000567957 CHIC1Q5VXU3 224 aa31.46■■■□□ 2.63
ITFG1-210ENST00000567957 SENP3Q9H4L4 574 aaPredicted RBP28.21■■■□□ 2.11
ITFG1-210ENST00000567957 PHF23Q9BUL5 403 aaPredicted RBP27.85■■■□□ 2.05
ITFG1-210ENST00000567957 FOXD1Q16676 465 aa26.27■■□□□ 1.8
ITFG1-210ENST00000567957 PLPPR3Q6T4P5 718 aa25.19■■□□□ 1.62
ITFG1-210ENST00000567957 PPP6R1Q9UPN7 881 aa24.6■■□□□ 1.53
ITFG1-210ENST00000567957 PIAS4Q8N2W9 510 aaPredicted RBP24.59■■□□□ 1.53
ITFG1-210ENST00000567957 MSH5O43196 834 aa24.58■■□□□ 1.53
ITFG1-210ENST00000567957 ADRA2BP18089 450 aa24.55■■□□□ 1.52
ITFG1-210ENST00000567957 POTEDQ86YR6 584 aa24.14■■□□□ 1.45
ITFG1-210ENST00000567957 MAPK8IP2Q13387 824 aaPredicted RBP22.53■■□□□ 1.2
ITFG1-210ENST00000567957 SCAF1Q9H7N4 1312 aaKnown RBP22.5■■□□□ 1.19
ITFG1-210ENST00000567957 DMRT2Q9Y5R5 561 aa22.37■■□□□ 1.17
ITFG1-210ENST00000567957 PPP4R3CPQ6ZMV5 832 aa22.08■■□□□ 1.13
ITFG1-210ENST00000567957 CNKSR2Q8WXI2 1034 aa21.66■■□□□ 1.06
ITFG1-210ENST00000567957 HOXD11P31277 338 aaPredicted RBP21.57■■□□□ 1.04
ITFG1-210ENST00000567957 DCAF8L1A6NGE4 600 aa21.5■■□□□ 1.03
ITFG1-210ENST00000567957 RNF216Q9NWF9 866 aaPredicted RBP21.44■■□□□ 1.02
ITFG1-210ENST00000567957 NCBP3Q53F19 620 aaKnown RBP21.28■■□□□ 1
ITFG1-210ENST00000567957 CACNB1Q02641 598 aaPredicted RBP21.06■□□□□ 0.96
ITFG1-210ENST00000567957 RNF39Q9H2S5 420 aa20.97■□□□□ 0.95
ITFG1-210ENST00000567957 NPM3O75607 178 aaKnown RBP20.95■□□□□ 0.94
ITFG1-210ENST00000567957 DNAJC5BQ9UF47 199 aa20.8■□□□□ 0.92
ITFG1-210ENST00000567957 C1QBPQ07021 282 aaKnown RBP20.67■□□□□ 0.9
ITFG1-210ENST00000567957 KCNA4P22459 653 aa20.61■□□□□ 0.89
ITFG1-210ENST00000567957 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.59■□□□□ 0.89
ITFG1-210ENST00000567957 U3KPZ7 1027 aaPredicted RBP20.14■□□□□ 0.81
ITFG1-210ENST00000567957 SLC4A2P04920 1241 aa19.97■□□□□ 0.79
ITFG1-210ENST00000567957 SPINK5Q9NQ38 1064 aaPredicted RBP19.83■□□□□ 0.77
ITFG1-210ENST00000567957 CAPN15O75808 1086 aa19.82■□□□□ 0.76
ITFG1-210ENST00000567957 DSG3P32926 999 aa19.66■□□□□ 0.74
ITFG1-210ENST00000567957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.62■□□□□ 0.73
ITFG1-210ENST00000567957 APLP2Q06481 763 aa19.62■□□□□ 0.73
ITFG1-210ENST00000567957 HNRNPUL2Q1KMD3 747 aaKnown RBP19.62■□□□□ 0.73
ITFG1-210ENST00000567957 TRHP20396 242 aaPredicted RBP19.52■□□□□ 0.72
ITFG1-210ENST00000567957 SAMD1Q6SPF0 538 aaPredicted RBP19.5■□□□□ 0.71
ITFG1-210ENST00000567957 SLC4A1APQ9BWU0 796 aaKnown RBP19.49■□□□□ 0.71
ITFG1-210ENST00000567957 ZNF219Q9P2Y4 722 aaPredicted RBP19.48■□□□□ 0.71
ITFG1-210ENST00000567957 MYCNP04198 464 aaPredicted RBP19.38■□□□□ 0.69
ITFG1-210ENST00000567957 ABCB7O75027 752 aa19.36■□□□□ 0.69
ITFG1-210ENST00000567957 FOXD4L1Q9NU39 408 aa19.21■□□□□ 0.67
ITFG1-210ENST00000567957 POLA2Q14181 598 aa19.01■□□□□ 0.63
ITFG1-210ENST00000567957 ZBTB22O15209 634 aa18.93■□□□□ 0.62
ITFG1-210ENST00000567957 ATF5Q9Y2D1 282 aaPredicted RBP18.91■□□□□ 0.62
ITFG1-210ENST00000567957 POTEHQ6S545 545 aa18.86■□□□□ 0.61
ITFG1-210ENST00000567957 RBM42Q9BTD8 480 aaKnown RBP18.78■□□□□ 0.6
ITFG1-210ENST00000567957 ZBTB12Q9Y330 459 aaPredicted RBP18.63■□□□□ 0.57
ITFG1-210ENST00000567957 ATXN8OSP0DMR3 200 aa18.62■□□□□ 0.57
ITFG1-210ENST00000567957 OSCARQ8IYS5 282 aa18.39■□□□□ 0.53
ITFG1-210ENST00000567957 AKT1S1Q96B36 256 aa18.35■□□□□ 0.53
ITFG1-210ENST00000567957 CHRDL2Q6WN34 429 aa18.33■□□□□ 0.52
ITFG1-210ENST00000567957 FBLN2P98095 1184 aa18.22■□□□□ 0.51
ITFG1-210ENST00000567957 REM2Q8IYK8 340 aaPredicted RBP18.18■□□□□ 0.5
ITFG1-210ENST00000567957 CSRNP3Q8WYN3 585 aa18.13■□□□□ 0.49
ITFG1-210ENST00000567957 SPDYE2BA6NHP3 402 aa18.05■□□□□ 0.48
ITFG1-210ENST00000567957 SPDYE6P0CI01 402 aa18.05■□□□□ 0.48
ITFG1-210ENST00000567957 SPDYE2Q495Y8 402 aa18.05■□□□□ 0.48
ITFG1-210ENST00000567957 MKRN4PQ13434 485 aaPredicted RBP18.04■□□□□ 0.48
ITFG1-210ENST00000567957 PITPNM1O00562 1244 aa17.99■□□□□ 0.47
ITFG1-210ENST00000567957 EHMT2Q96KQ7 1210 aa17.97■□□□□ 0.47
ITFG1-210ENST00000567957 PIP4P2Q8N4L2 257 aa17.9■□□□□ 0.46
ITFG1-210ENST00000567957 ZNF692Q9BU19 519 aaPredicted RBP17.86■□□□□ 0.45
ITFG1-210ENST00000567957 FXR2P51116 673 aaKnown RBP eCLIP17.8■□□□□ 0.44
ITFG1-210ENST00000567957 SSUH2Q9Y2M2 353 aa17.79■□□□□ 0.44
ITFG1-210ENST00000567957 SPDYE1Q8NFV5 336 aaPredicted RBP17.73■□□□□ 0.43
ITFG1-210ENST00000567957 CLEC11AQ9Y240 323 aa17.71■□□□□ 0.43
ITFG1-210ENST00000567957 HAX1O00165 279 aa17.59■□□□□ 0.41
ITFG1-210ENST00000567957 PABPN1Q86U42 306 aaKnown RBP eCLIP17.59■□□□□ 0.41
ITFG1-210ENST00000567957 SP7Q8TDD2 431 aaPredicted RBP17.58■□□□□ 0.4
ITFG1-210ENST00000567957 PRKAR2AP13861 404 aaKnown RBP17.53■□□□□ 0.4
ITFG1-210ENST00000567957 PRR29P0C7W0 189 aa17.42■□□□□ 0.38
ITFG1-210ENST00000567957 CHADLQ6NUI6 762 aa17.34■□□□□ 0.37
ITFG1-210ENST00000567957 EVX2Q03828 476 aa17.33■□□□□ 0.36
ITFG1-210ENST00000567957 SPDYE4A6NLX3 237 aa17.26■□□□□ 0.35
ITFG1-210ENST00000567957 C19orf67A6NJJ6 358 aa17.23■□□□□ 0.35
ITFG1-210ENST00000567957 STAG3Q9UJ98 1225 aa17.13■□□□□ 0.33
ITFG1-210ENST00000567957 FARP1Q9Y4F1 1045 aaPredicted RBP17.1■□□□□ 0.33
ITFG1-210ENST00000567957 CD44P16070 742 aaKnown RBP16.99■□□□□ 0.31
ITFG1-210ENST00000567957 GABBR2O75899 941 aa16.97■□□□□ 0.31
ITFG1-210ENST00000567957 CREBZFQ9NS37 354 aa16.97■□□□□ 0.31
ITFG1-210ENST00000567957 PROM2Q8N271 834 aa16.81■□□□□ 0.28
ITFG1-210ENST00000567957 ZRANB1Q9UGI0 708 aa16.76■□□□□ 0.27
ITFG1-210ENST00000567957 CLCN6P51797 869 aa16.73■□□□□ 0.27
ITFG1-210ENST00000567957 NPM1P06748 294 aaKnown RBP eCLIP16.7■□□□□ 0.26
ITFG1-210ENST00000567957 ZNF579Q8NAF0 562 aaKnown RBP16.7■□□□□ 0.26
ITFG1-210ENST00000567957 MNX1P50219 401 aaPredicted RBP16.67■□□□□ 0.26
ITFG1-210ENST00000567957 PAK3O75914 559 aaPredicted RBP16.66■□□□□ 0.26
ITFG1-210ENST00000567957 POTEIP0CG38 1075 aa16.59■□□□□ 0.25
ITFG1-210ENST00000567957 DCBLD2Q96PD2 775 aa16.55■□□□□ 0.24
ITFG1-210ENST00000567957 PHF12Q96QT6 1004 aa16.53■□□□□ 0.24
ITFG1-210ENST00000567957 GALR2O43603 387 aaPredicted RBP16.5■□□□□ 0.23
ITFG1-210ENST00000567957 LHX8Q68G74 356 aa16.5■□□□□ 0.23
ITFG1-210ENST00000567957 PLEKHG5O94827 1062 aa16.47■□□□□ 0.23
ITFG1-210ENST00000567957 FKBP8Q14318 412 aa16.47■□□□□ 0.23
ITFG1-210ENST00000567957 MIER1Q8N108 512 aa16.47■□□□□ 0.23
ITFG1-210ENST00000567957 TSPYL2Q9H2G4 693 aaPredicted RBP16.39■□□□□ 0.21
ITFG1-210ENST00000567957 PLCD3Q8N3E9 789 aa16.36■□□□□ 0.21
ITFG1-210ENST00000567957 MS4A3Q96HJ5 214 aa16.3■□□□□ 0.2
ITFG1-210ENST00000567957 CCDC61Q9Y6R9 512 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 143.2 ms