RNA–Protein interactions for RNA: ENST00000567451.1

CCP110-209, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 1 (best)

Gene CCP110, Length 1,151 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-209ENST00000567451 AEBP2Q6ZN18 517 aaPredicted RBP32.88■■■□□ 2.85
CCP110-209ENST00000567451 CHIC1Q5VXU3 224 aa31.24■■■□□ 2.59
CCP110-209ENST00000567451 SENP3Q9H4L4 574 aaPredicted RBP27.81■■■□□ 2.04
CCP110-209ENST00000567451 PHF23Q9BUL5 403 aaPredicted RBP27.55■■■□□ 2
CCP110-209ENST00000567451 FOXD1Q16676 465 aa26.04■■□□□ 1.76
CCP110-209ENST00000567451 PLPPR3Q6T4P5 718 aa24.92■■□□□ 1.58
CCP110-209ENST00000567451 PPP6R1Q9UPN7 881 aa24.53■■□□□ 1.52
CCP110-209ENST00000567451 ADRA2BP18089 450 aa24.37■■□□□ 1.49
CCP110-209ENST00000567451 PIAS4Q8N2W9 510 aaPredicted RBP24.23■■□□□ 1.47
CCP110-209ENST00000567451 MSH5O43196 834 aa24.16■■□□□ 1.46
CCP110-209ENST00000567451 POTEDQ86YR6 584 aa23.5■■□□□ 1.35
CCP110-209ENST00000567451 MAPK8IP2Q13387 824 aaPredicted RBP22.39■■□□□ 1.17
CCP110-209ENST00000567451 DMRT2Q9Y5R5 561 aa22.15■■□□□ 1.14
CCP110-209ENST00000567451 SCAF1Q9H7N4 1312 aaKnown RBP22.08■■□□□ 1.13
CCP110-209ENST00000567451 PPP4R3CPQ6ZMV5 832 aa21.91■■□□□ 1.1
CCP110-209ENST00000567451 CNKSR2Q8WXI2 1034 aa21.44■■□□□ 1.02
CCP110-209ENST00000567451 HOXD11P31277 338 aaPredicted RBP21.43■■□□□ 1.02
CCP110-209ENST00000567451 RNF216Q9NWF9 866 aaPredicted RBP21.24■□□□□ 0.99
CCP110-209ENST00000567451 DCAF8L1A6NGE4 600 aa21.03■□□□□ 0.96
CCP110-209ENST00000567451 NCBP3Q53F19 620 aaKnown RBP20.96■□□□□ 0.95
CCP110-209ENST00000567451 NPM3O75607 178 aaKnown RBP20.84■□□□□ 0.93
CCP110-209ENST00000567451 RNF39Q9H2S5 420 aa20.75■□□□□ 0.91
CCP110-209ENST00000567451 DNAJC5BQ9UF47 199 aa20.65■□□□□ 0.9
CCP110-209ENST00000567451 CACNB1Q02641 598 aaPredicted RBP20.63■□□□□ 0.89
CCP110-209ENST00000567451 KCNA4P22459 653 aa20.57■□□□□ 0.88
CCP110-209ENST00000567451 C1QBPQ07021 282 aaKnown RBP20.37■□□□□ 0.85
CCP110-209ENST00000567451 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.24■□□□□ 0.83
CCP110-209ENST00000567451 U3KPZ7 1027 aaPredicted RBP19.99■□□□□ 0.79
CCP110-209ENST00000567451 SLC4A2P04920 1241 aa19.95■□□□□ 0.78
CCP110-209ENST00000567451 SPINK5Q9NQ38 1064 aaPredicted RBP19.66■□□□□ 0.74
CCP110-209ENST00000567451 DSG3P32926 999 aa19.47■□□□□ 0.71
CCP110-209ENST00000567451 CAPN15O75808 1086 aa19.46■□□□□ 0.71
CCP110-209ENST00000567451 SLC4A1APQ9BWU0 796 aaKnown RBP19.34■□□□□ 0.69
CCP110-209ENST00000567451 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.26■□□□□ 0.67
CCP110-209ENST00000567451 HNRNPUL2Q1KMD3 747 aaKnown RBP19.26■□□□□ 0.67
CCP110-209ENST00000567451 SAMD1Q6SPF0 538 aaPredicted RBP19.2■□□□□ 0.66
CCP110-209ENST00000567451 TRHP20396 242 aaPredicted RBP19.19■□□□□ 0.66
CCP110-209ENST00000567451 MYCNP04198 464 aaPredicted RBP19.17■□□□□ 0.66
CCP110-209ENST00000567451 APLP2Q06481 763 aa19.17■□□□□ 0.66
CCP110-209ENST00000567451 ZNF219Q9P2Y4 722 aaPredicted RBP19.15■□□□□ 0.66
CCP110-209ENST00000567451 ABCB7O75027 752 aa19.08■□□□□ 0.64
CCP110-209ENST00000567451 FOXD4L1Q9NU39 408 aa19.07■□□□□ 0.64
CCP110-209ENST00000567451 ZBTB22O15209 634 aa19.02■□□□□ 0.64
CCP110-209ENST00000567451 ATF5Q9Y2D1 282 aaPredicted RBP18.9■□□□□ 0.62
CCP110-209ENST00000567451 POLA2Q14181 598 aa18.77■□□□□ 0.6
CCP110-209ENST00000567451 ATXN8OSP0DMR3 200 aa18.48■□□□□ 0.55
CCP110-209ENST00000567451 RBM42Q9BTD8 480 aaKnown RBP18.4■□□□□ 0.54
CCP110-209ENST00000567451 POTEHQ6S545 545 aa18.38■□□□□ 0.53
CCP110-209ENST00000567451 ZBTB12Q9Y330 459 aaPredicted RBP18.27■□□□□ 0.52
CCP110-209ENST00000567451 CSRNP3Q8WYN3 585 aa18.2■□□□□ 0.5
CCP110-209ENST00000567451 OSCARQ8IYS5 282 aa18.18■□□□□ 0.5
CCP110-209ENST00000567451 AKT1S1Q96B36 256 aa18.09■□□□□ 0.49
CCP110-209ENST00000567451 MKRN4PQ13434 485 aaPredicted RBP18.04■□□□□ 0.48
CCP110-209ENST00000567451 CHRDL2Q6WN34 429 aa18.04■□□□□ 0.48
CCP110-209ENST00000567451 REM2Q8IYK8 340 aaPredicted RBP17.97■□□□□ 0.47
CCP110-209ENST00000567451 FBLN2P98095 1184 aa17.88■□□□□ 0.45
CCP110-209ENST00000567451 EHMT2Q96KQ7 1210 aa17.87■□□□□ 0.45
CCP110-209ENST00000567451 SPDYE2BA6NHP3 402 aa17.82■□□□□ 0.44
CCP110-209ENST00000567451 SPDYE6P0CI01 402 aa17.82■□□□□ 0.44
CCP110-209ENST00000567451 SPDYE2Q495Y8 402 aa17.82■□□□□ 0.44
CCP110-209ENST00000567451 PITPNM1O00562 1244 aa17.78■□□□□ 0.44
CCP110-209ENST00000567451 PIP4P2Q8N4L2 257 aa17.69■□□□□ 0.42
CCP110-209ENST00000567451 SSUH2Q9Y2M2 353 aa17.69■□□□□ 0.42
CCP110-209ENST00000567451 FXR2P51116 673 aaKnown RBP eCLIP17.64■□□□□ 0.41
CCP110-209ENST00000567451 ZNF692Q9BU19 519 aaPredicted RBP17.6■□□□□ 0.41
CCP110-209ENST00000567451 SPDYE1Q8NFV5 336 aaPredicted RBP17.43■□□□□ 0.38
CCP110-209ENST00000567451 PABPN1Q86U42 306 aaKnown RBP eCLIP17.37■□□□□ 0.37
CCP110-209ENST00000567451 CLEC11AQ9Y240 323 aa17.36■□□□□ 0.37
CCP110-209ENST00000567451 SP7Q8TDD2 431 aaPredicted RBP17.28■□□□□ 0.36
CCP110-209ENST00000567451 PRKAR2AP13861 404 aaKnown RBP17.26■□□□□ 0.35
CCP110-209ENST00000567451 EVX2Q03828 476 aa17.25■□□□□ 0.35
CCP110-209ENST00000567451 HAX1O00165 279 aa17.21■□□□□ 0.35
CCP110-209ENST00000567451 CHADLQ6NUI6 762 aa17.14■□□□□ 0.33
CCP110-209ENST00000567451 PRR29P0C7W0 189 aa17.12■□□□□ 0.33
CCP110-209ENST00000567451 SPDYE4A6NLX3 237 aa17.08■□□□□ 0.32
CCP110-209ENST00000567451 C19orf67A6NJJ6 358 aa17.07■□□□□ 0.32
CCP110-209ENST00000567451 FARP1Q9Y4F1 1045 aaPredicted RBP16.89■□□□□ 0.29
CCP110-209ENST00000567451 PROM2Q8N271 834 aa16.88■□□□□ 0.29
CCP110-209ENST00000567451 CREBZFQ9NS37 354 aa16.88■□□□□ 0.29
CCP110-209ENST00000567451 STAG3Q9UJ98 1225 aa16.85■□□□□ 0.29
CCP110-209ENST00000567451 GABBR2O75899 941 aa16.76■□□□□ 0.27
CCP110-209ENST00000567451 CD44P16070 742 aaKnown RBP16.7■□□□□ 0.26
CCP110-209ENST00000567451 MNX1P50219 401 aaPredicted RBP16.68■□□□□ 0.26
CCP110-209ENST00000567451 POTEIP0CG38 1075 aa16.51■□□□□ 0.23
CCP110-209ENST00000567451 ZNF579Q8NAF0 562 aaKnown RBP16.51■□□□□ 0.23
CCP110-209ENST00000567451 ZRANB1Q9UGI0 708 aa16.48■□□□□ 0.23
CCP110-209ENST00000567451 CLCN6P51797 869 aa16.41■□□□□ 0.22
CCP110-209ENST00000567451 NPM1P06748 294 aaKnown RBP eCLIP16.38■□□□□ 0.21
CCP110-209ENST00000567451 FKBP8Q14318 412 aa16.36■□□□□ 0.21
CCP110-209ENST00000567451 PHF12Q96QT6 1004 aa16.33■□□□□ 0.2
CCP110-209ENST00000567451 GALR2O43603 387 aaPredicted RBP16.32■□□□□ 0.2
CCP110-209ENST00000567451 MIER1Q8N108 512 aa16.23■□□□□ 0.19
CCP110-209ENST00000567451 PAK3O75914 559 aaPredicted RBP16.22■□□□□ 0.19
CCP110-209ENST00000567451 LHX8Q68G74 356 aa16.2■□□□□ 0.18
CCP110-209ENST00000567451 CCDC61Q9Y6R9 512 aa16.19■□□□□ 0.18
CCP110-209ENST00000567451 DCBLD2Q96PD2 775 aa16.17■□□□□ 0.18
CCP110-209ENST00000567451 RASEFQ8IZ41 740 aa16.15■□□□□ 0.18
CCP110-209ENST00000567451 TSPYL2Q9H2G4 693 aaPredicted RBP16.14■□□□□ 0.17
CCP110-209ENST00000567451 MS4A3Q96HJ5 214 aa16.12■□□□□ 0.17
CCP110-209ENST00000567451 PELP1Q8IZL8 1130 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms